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Oryza sativa
cluster # 1888 cluster # 1888       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1888#0 length = 3114 sequences # 1  
 consensus_1888#1 length = 684 sequences # 1  
consensusID : consensus_1888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3114
fasta sequence 
                              [TTCCGCTTCCGGGAGACGGCGGCGACACGCAGGCGGCGCGACGACGAGGATGGCGGCGTCGGGGAAGGAAGCGATGGTGTGGGTGCGGATACTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGAGGCCGCGCGGGCGGCGGCGGGGCCCAGCCTCTCGTTCGCCGTGCCGCGGCGGCGAGAGGAGCCGCGCGCCGGAGGGGACCGCCCGGCGATCGTGCCGGTGTGCGAGGTGGTGGGAGATGTCCAGCGCGTCGTGGTTGAGCTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTGGAAAGCTGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATCACTATATCAGTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCCTTGCTGACACTACTTGCCGCTGTGAGATTGACTTACGGCAAGAATCTACTATGAAATTTTCTGCTTCATGCACTTACCCTGTCATACTGTTTGGACCTTTTAATACACCCTCTGAAGTTACCACATCCTTGTCTCATGCAATTGGAACTGTGTCCATGCCACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTATGACTCTTCTGAGAAAGTACTGCAGGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATGTTGTATGGATGGATATTGATTACATGGATGGTTTTAGGTGCTTTACGTTTAGCCATCGTTTCCCTGATCCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGACCCAGGAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGGTTCAAAAGGAAGACAAGCAGCCGTTCGTTGGAGAAGTATGGCCTGGTGATTGTGTTTTCCCTGATTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGGCAGTTCGTCTCTAATAGCGTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATACTGCCACCAAAACAATGCCAGAAAGCAATATCCATAGAGGAGATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCATAACGTCTATGGAATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACTAAACGGCCATTTGTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTGGGTCTTAGTGGTCAACCATTTGCAGGCCCAGATATTGGTGGGTTTGCTGGGAATGCTACTCCAAAACTTTTTGGAAGATGGATGGGAGTGGGTGCATTGTTTCCATTTTCTCGTGGCCATTCTGATAAAGGAAGCTTGGACCATGAGCCGTGGTCCTTTGGGGAAGAGTGTGAGGAGGTTTGTCGCCTTGCTTTACTAAGACGGTACCGGCTATTACCACACATTTATACTCTATTTTACCTTTCTCATACGAACGGAACTCCTGTTGCTGCTCCAGTTTACTTCGCAGATCCACAAGATTTAGAGTTAAGGAAAATTGAGACCTCATTTCTCTTGGGATCACTTCTAGTTTGTGCAAGCACTTGTCCTGATAAAGGAGCTCATGAATCTTCACAGAAGCTGCCAAAGGGAATTTGGTTGCCTTTTGATTTTGGAGATTCACACCCTGATCTGCCGATGATGTATTTACGAGGTGGAGCAGTACTTCCCATAGGCCTTCCTCTCAATCATGTTGGTGAAGCAAAATTGGATGATAATTTGTCATTGATTATTGCATTAGATGAAAATGGAAAAGCTGAAGGTGTCCTCTTTGAAGATGATGGGGATGGATATGAGTTCCTTCAAGGGAATTATCTTTTGACATACTATGTTGCAGAACTCCACTCATCAGTGGTTACTGTTAAAGTTGCCCGAACTGAAGGATCATGGAAGAGACCAAATCGCAACTTAAAAATAAATATATTGCTTGGAGGAGGTGCTATGGTAAGTACGCACGGCATTGATGGGGAAGATTTACATCTAACAATGCCTACTGAATCTGAAGTGTCAAGTCTAGTGGCAACAAGTGAACTTGAGCTCAAAAAACGTTTTGAGATGGTTCGACCTATTCCAGACATAGATAAGCCATTAGGGAAGGAAGTGGCTGAACTTTCTGAAATACCTATTGATTTGAACGGCGAGGACTGGTTGGTTAAAGTTGTACCCCAGATCGGTGGTCGTATTATCTCAATGACACATCTTCCATCTGATTCTCAATGGCTACACAGCACAAATAGGATCAATGGGTATGAGGAATATAATGCGGCTGAAGATACTGCTGGCTGCACAGAAGAGTACAAAGTCATTAGGAGGTATCGCGAGCAATCAGGAAAAGAGGAATCTATTTGTTTGGAAGGAGATATTGGGGGTGGTTTGGTTCTTCAGCGCCAAATATCCATTTGTAAGGAAAACCCAAAGATTGTTAAGATCGACTCCAGTATTCGAGCAAAACAGGGAGCTGATCATTCTGGTGGGTTTTCAGGGTTGGCCTGTTTGAGGGTTCGTCCTAGTTTCATTCTTCAGTACCCTACAGAGGTTTCTGTTGTGTTTACAGCAAGCAACGGTATAAAGCGAGAAATACTTCCAGATTCTGGAGAATTGACATTTGAGGGAGTTCTTCGTCCCAATGGGGAATGGATGCTAGTTGACAAACGTACGAATCTGAGCCTGGTAAATTGCTTCGATCTCAGTCAGGTTAGTATATGTAAGTTGCATTGGGGAACTGATCATTTGAACATGGAACTGTGGTCGGAGCAAAGAGCAGTTTCTAAGGACACACCGTTAAGAATTTGCCACCATTATGAGGTGAGAAAAATAAACTAAATCCTTGAATGCACATGGAGCAGAAATAGGATGACTATCAAGGGACTTGTTTCCTGAACTATTTTACCCAATAAATGTAAACTGAACCGAGTAATGCCACAGTAAAGGTGTATCACCATTTT]

[+] EMBL AK121014             [TTCCGCTTCCGGGAGACGGCGGCGACACGCAGGCGGCGCGACGACGAGGATGGCGGCGTCGGGGAAGGAAGCGATGGTGTGGGTGCGGATACTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGAGGCCGCGCGGGCGGCGGCGGGGCCCAGCCTCTCGTTCGCCGTGCCGCGGCGGCGAGAGGAGCCGCGCGCCGGAGGGGACCGCCCGGCGATCGTGCCGGTGTGCGAGGTGGTGGGAGATGTCCAGCGCGTCGTGGTTGAGCTTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTGGAAAGCTGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATCACTATATCAGTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCCTTGCTGACACTACTTGCCGCTGTGAGATTGACTTACGGCAAGAATCTACTATGAAATTTTCTGCTTCATGCACTTACCCTGTCATACTGTTTGGACCTTTTAATACACCCTCTGAAGTTACCACATCCTTGTCTCATGCAATTGGAACTGTGTCCATGCCACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTATGACTCTTCTGAGAAAGTACTGCAGGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATGTTGTATGGATGGATATTGATTACATGGATGGTTTTAGGTGCTTTACGTTTAGCCATCGTTTCCCTGATCCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGACCCAGGAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGGTTCAAAAGGAAGACAAGCAGCCGTTCGTTGGAGAAGTATGGCCTGGTGATTGTGTTTTCCCTGATTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGGCAGTTCGTCTCTAATAGCGTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATACTGCCACCAAAACAATGCCAGAAAGCAATATCCATAGAGGAGATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCATAACGTCTATGGAATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACTAAACGGCCATTTGTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTTCAGTTGGGTCTTAGTGGTCAACCATTTGCAGGCCCAGATATTGGTGGGTTTGCTGGGAATGCTACTCCAAAACTTTTTGGAAGATGGATGGGAGTGGGTGCATTGTTTCCATTTTCTCGTGGCCATTCTGATAAAGGAAGCTTGGACCATGAGCCGTGGTCCTTTGGGGAAGAGTGTGAGGAGGTTTGTCGCCTTGCTTTACTAAGACGGTACCGGCTATTACCACACATTTATACTCTATTTTACCTTTCTCATACGAACGGAACTCCTGTTGCTGCTCCAGTTTACTTCGCAGATCCACAAGATTTAGAGTTAAGGAAAATTGAGACCTCATTTCTCTTGGGATCACTTCTAGTTTGTGCAAGCACTTGTCCTGATAAAGGAGCTCATGAATCTTCACAGAAGCTGCCAAAGGGAATTTGGTTGCCTTTTGATTTTGGAGATTCACACCCTGATCTGCCGATGATGTATTTACGAGGTGGAGCAGTACTTCCCATAGGCCTTCCTCTCAATCATGTTGGTGAAGCAAAATTGGATGATAATTTGTCATTGATTATTGCATTAGATGAAAATGGAAAAGCTGAAGGTGTCCTCTTTGAAGATGATGGGGATGGATATGAGTTCCTTCAAGGGAATTATCTTTTGACATACTATGTTGCAGAACTCCACTCATCAGTGGTTACTGTTAAAGTTGCCCGAACTGAAGGATCATGGAAGAGACCAAATCGCAACTTAAAAATAAATATATTGCTTGGAGGAGGTGCTATGGTAAGTACGCACGGCATTGATGGGGAAGATTTACATCTAACAATGCCTACTGAATCTGAAGTGTCAAGTCTAGTGGCAACAAGTGAACTTGAGCTCAAAAAACGTTTTGAGATGGTTCGACCTATTCCAGACATAGATAAGCCATTAGGGAAGGAAGTGGCTGAACTTTCTGAAATACCTATTGATTTGAACGGCGAGGACTGGTTGGTTAAAGTTGTACCCCAGATCGGTGGTCGTATTATCTCAATGACACATCTTCCATCTGATTCTCAATGGCTACACAGCACAAATAGGATCAATGGGTATGAGGAATATAATGCGGCTGAAGATACTGCTGGCTGCACAGAAGAGTACAAAGTCATTAGGAGGTATCGCGAGCAATCAGGAAAAGAGGAATCTATTTGTTTGGAAGGAGATATTGGGGGTGGTTTGGTTCTTCAGCGCCAAATATCCATTTGTAAGGAAAACCCAAAGATTGTTAAGATCGACTCCAGTATTCGAGCAAAACAGGGAGCTGATCATTCTGGTGGGTTTTCAGGGTTGGCCTGTTTGAGGGTTCGTCCTAGTTTCATTCTTCAGTACCCTACAGAGGTTTCTGTTGTGTTTACAGCAAGCAACGGTATAAAGCGAGAAATACTTCCAGATTCTGGAGAATTGACATTTGAGGGAGTTCTTCGTCCCAATGGGGAATGGATGCTAGTTGACAAACGTACGAATCTGAGCCTGGTAAATTGCTTCGATCTCAGTCAGGTTAGTATATGTAAGTTGCATTGGGGAACTGATCATTTGAACATGGAACTGTGGTCGGAGCAAAGAGCAGTTTCTAAGGACACACCGTTAAGAATTTGCCACCATTATGAGGTGAGAAAAATAAACTAAATCCTTGAATGCACATGGAGCAGAAATAGGATGACTATCAAGGGACTTGTTTCCTGAACTATTTTACCCAATAAATGTAAACTGAACCGAGTAATGCCACAGTAAAGGTGTATCACCATTTT]




>consensus_1888#0
TTCCGCTTCCGGGAGACGGCGGCGACACGCAGGCGGCGCGACGACGAGGATGGCGGCGTC
GGGGAAGGAAGCGATGGTGTGGGTGCGGATACTGGAGGAGGGGGTGTTCCGGTTCGACGC
GTCGGAGGCCGCGCGGGCGGCGGCGGGGCCCAGCCTCTCGTTCGCCGTGCCGCGGCGGCG
AGAGGAGCCGCGCGCCGGAGGGGACCGCCCGGCGATCGTGCCGGTGTGCGAGGTGGTGGG
AGATGTCCAGCGCGTCGTGGTTGAGCTTCCTTCTGGGACATCTTTCTATGGTACTGGAGA
ATCAAGTGGGCCACTTGAGAGAACTGGAAAGCTGGTTATTACTTGGAACACGGATGCATG
GGATTATGGTCCAGGAACCACATCACTATATCAGTCACACCCTTGGGTACTGGCTGTTCT
TCCTGATGGGAAGGCATTGGGAGTCCTTGCTGACACTACTTGCCGCTGTGAGATTGACTT
ACGGCAAGAATCTACTATGAAATTTTCTGCTTCATGCACTTACCCTGTCATACTGTTTGG
ACCTTTTAATACACCCTCTGAAGTTACCACATCCTTGTCTCATGCAATTGGAACTGTGTC
CATGCCACCAAAATGGTCACTCGGATACCATCAATGTCGTTATAGCTATGACTCTTCTGA
GAAAGTACTGCAGGTTGTTAAAACATTTAGAGAAAGAGGCATTCCTTGTGATGTTGTATG
GATGGATATTGATTACATGGATGGTTTTAGGTGCTTTACGTTTAGCCATCGTTTCCCTGA
TCCGAAATGTATGGTTGATGATCTCCATTCGGTTGGCTGCAAAGCAATATGGATGCTTGA
CCCAGGAATCAAGAATGAGAGCGGTTACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGT
TTGGGTTCAAAAGGAAGACAAGCAGCCGTTCGTTGGAGAAGTATGGCCTGGTGATTGTGT
TTTCCCTGATTTTACTTGTGAAAGAGCCCGCTCCTGGTGGTCTGGCTTAGTAAGGCAGTT
CGTCTCTAATAGCGTTGATGGATTATGGAATGATATGAATGAACCTGCTGTTTTTAATAC
TGCCACCAAAACAATGCCAGAAAGCAATATCCATAGAGGAGATGCTAATATTGGTGGTCT
CCAGAATCATCCGTACTACCATAACGTCTATGGAATGCTCATGGCAAAATCTACTTATGA
GGGAATGAAATTGGCCAATCCAACTAAACGGCCATTTGTTCTTACTCGAGCTGGTTTTAT
AGGACAACAACGCTATGCTGCTATGTGGACTGGTGATAATGTATCAAACTGGGAACATCT
CCACATGAGTATAGCCATGGTTCTTCAGTTGGGTCTTAGTGGTCAACCATTTGCAGGCCC
AGATATTGGTGGGTTTGCTGGGAATGCTACTCCAAAACTTTTTGGAAGATGGATGGGAGT
GGGTGCATTGTTTCCATTTTCTCGTGGCCATTCTGATAAAGGAAGCTTGGACCATGAGCC
GTGGTCCTTTGGGGAAGAGTGTGAGGAGGTTTGTCGCCTTGCTTTACTAAGACGGTACCG
GCTATTACCACACATTTATACTCTATTTTACCTTTCTCATACGAACGGAACTCCTGTTGC
TGCTCCAGTTTACTTCGCAGATCCACAAGATTTAGAGTTAAGGAAAATTGAGACCTCATT
TCTCTTGGGATCACTTCTAGTTTGTGCAAGCACTTGTCCTGATAAAGGAGCTCATGAATC
TTCACAGAAGCTGCCAAAGGGAATTTGGTTGCCTTTTGATTTTGGAGATTCACACCCTGA
TCTGCCGATGATGTATTTACGAGGTGGAGCAGTACTTCCCATAGGCCTTCCTCTCAATCA
TGTTGGTGAAGCAAAATTGGATGATAATTTGTCATTGATTATTGCATTAGATGAAAATGG
AAAAGCTGAAGGTGTCCTCTTTGAAGATGATGGGGATGGATATGAGTTCCTTCAAGGGAA
TTATCTTTTGACATACTATGTTGCAGAACTCCACTCATCAGTGGTTACTGTTAAAGTTGC
CCGAACTGAAGGATCATGGAAGAGACCAAATCGCAACTTAAAAATAAATATATTGCTTGG
AGGAGGTGCTATGGTAAGTACGCACGGCATTGATGGGGAAGATTTACATCTAACAATGCC
TACTGAATCTGAAGTGTCAAGTCTAGTGGCAACAAGTGAACTTGAGCTCAAAAAACGTTT
TGAGATGGTTCGACCTATTCCAGACATAGATAAGCCATTAGGGAAGGAAGTGGCTGAACT
TTCTGAAATACCTATTGATTTGAACGGCGAGGACTGGTTGGTTAAAGTTGTACCCCAGAT
CGGTGGTCGTATTATCTCAATGACACATCTTCCATCTGATTCTCAATGGCTACACAGCAC
AAATAGGATCAATGGGTATGAGGAATATAATGCGGCTGAAGATACTGCTGGCTGCACAGA
AGAGTACAAAGTCATTAGGAGGTATCGCGAGCAATCAGGAAAAGAGGAATCTATTTGTTT
GGAAGGAGATATTGGGGGTGGTTTGGTTCTTCAGCGCCAAATATCCATTTGTAAGGAAAA
CCCAAAGATTGTTAAGATCGACTCCAGTATTCGAGCAAAACAGGGAGCTGATCATTCTGG
TGGGTTTTCAGGGTTGGCCTGTTTGAGGGTTCGTCCTAGTTTCATTCTTCAGTACCCTAC
AGAGGTTTCTGTTGTGTTTACAGCAAGCAACGGTATAAAGCGAGAAATACTTCCAGATTC
TGGAGAATTGACATTTGAGGGAGTTCTTCGTCCCAATGGGGAATGGATGCTAGTTGACAA
ACGTACGAATCTGAGCCTGGTAAATTGCTTCGATCTCAGTCAGGTTAGTATATGTAAGTT
GCATTGGGGAACTGATCATTTGAACATGGAACTGTGGTCGGAGCAAAGAGCAGTTTCTAA
GGACACACCGTTAAGAATTTGCCACCATTATGAGGTGAGAAAAATAAACTAAATCCTTGA
ATGCACATGGAGCAGAAATAGGATGACTATCAAGGGACTTGTTTCCTGAACTATTTTACC
CAATAAATGTAAACTGAACCGAGTAATGCCACAGTAAAGGTGTATCACCATTTT

consensusID : consensus_1888#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence 
                              [GACTCGCCTCCTCCCACCCCCACCTCTTCCGAGGCAGCCCACGATCGCGCCTCCGTCTCATCCGCGATCCCGGCCGAGCCGATCCGCTTGCAGGCGGCGGCGGCGGGAGGGTGGTGGGGGTGTCGGCGGCGGGGAGGACGGCATCATCCGCCGCGGCGCCCGCGGAGATGGAGTGGGTGCGGGTGCTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGGGGCCGCGCGGGCGGCGGCCGCGCCCAGCTTCTCGTTCGCGGAGCCGCGGCGGAGGGAGGCGGCGCGGGAGGGCGCGGATACCCCCGCCGTCGTGCCGGCGTGCCACGTGGTCGGGGACGCCCAGAAGGTTCTGATTAAGCTTCCTGCTGGGACGTCTTTCTATGGCACAGGAGAAGCAAGTGGCCCGCTCGAGAGGACTGGGAAAAGAGTTTTTACTTGGAACACAGATGCATGGGGTTTTGGGCCAGGAACCACTTCATTATATCAGTCACACCCTTGGGTTTTGGCTGTCCTCCCTGATGGAAAGGCACTAAGTGTCCTTGCTGACACTACACAGCGTTGTGAAATTGACTTGCGAGAAGAATCTACTATAAACGTTTTCTGCTCCATCTGCTTATCCTATAGTTACTTTCGGGCCATTCAATACACCATCAAAAGTTATGTCATCCTTGTCCCATGCGATT]

[+] EMBL CB684041             [GACTCGCCTCCTCCCACCCCCACCTCTTCCGAGGCAGCCCACGATCGCGCCTCCGTCTCATCCGCGATCCCGGCCGAGCCGATCCGCTTGCAGGCGGCGGCGGCGGGAGGGTGGTGGGGGTGTCGGCGGCGGGGAGGACGGCATCATCCGCCGCGGCGCCCGCGGAGATGGAGTGGGTGCGGGTGCTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGGGGCCGCGCGGGCGGCGGCCGCGCCCAGCTTCTCGTTCGCGGAGCCGCGGCGGAGGGAGGCGGCGCGGGAGGGCGCGGATACCCCCGCCGTCGTGCCGGCGTGCCACGTGGTCGGGGACGCCCAGAAGGTTCTGATTAAGCTTCCTGCTGGGACGTCTTTCTATGGCACAGGAGAAGCAAGTGGCCCGCTCGAGAGGACTGGGAAAAGAGTTTTTACTTGGAACACAGATGCATGGGGTTTTGGGCCAGGAACCACTTCATTATATCAGTCACACCCTTGGGTTTTGGCTGTCCTCCCTGATGGAAAGGCACTAAGTGTCCTTGCTGACACTACACAGCGTTGTGAAATTGACTTGCGAGAAGAATCTACTATAAACGTTTTCTGCTCCATCTGCTTATCCTATAGTTACTTTCGGGCCATTCAATACACCATCAAAAGTTATGTCATCCTTGTCCCATGCGATT]




>consensus_1888#1
GACTCGCCTCCTCCCACCCCCACCTCTTCCGAGGCAGCCCACGATCGCGCCTCCGTCTCA
TCCGCGATCCCGGCCGAGCCGATCCGCTTGCAGGCGGCGGCGGCGGGAGGGTGGTGGGGG
TGTCGGCGGCGGGGAGGACGGCATCATCCGCCGCGGCGCCCGCGGAGATGGAGTGGGTGC
GGGTGCTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGGGGCCGCGCGGGCGGCGGCCG
CGCCCAGCTTCTCGTTCGCGGAGCCGCGGCGGAGGGAGGCGGCGCGGGAGGGCGCGGATA
CCCCCGCCGTCGTGCCGGCGTGCCACGTGGTCGGGGACGCCCAGAAGGTTCTGATTAAGC
TTCCTGCTGGGACGTCTTTCTATGGCACAGGAGAAGCAAGTGGCCCGCTCGAGAGGACTG
GGAAAAGAGTTTTTACTTGGAACACAGATGCATGGGGTTTTGGGCCAGGAACCACTTCAT
TATATCAGTCACACCCTTGGGTTTTGGCTGTCCTCCCTGATGGAAAGGCACTAAGTGTCC
TTGCTGACACTACACAGCGTTGTGAAATTGACTTGCGAGAAGAATCTACTATAAACGTTT
TCTGCTCCATCTGCTTATCCTATAGTTACTTTCGGGCCATTCAATACACCATCAAAAGTT
ATGTCATCCTTGTCCCATGCGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1888#0      ------------------------------------------------------------
consensus_1888#1      GACTCGCCTCCTCCCACCCCCACCTCTTCCGAGGCAGCCCACGATCGCGCCTCCGTCTCA 60
                                                                                  

consensus_1888#0      ---------------------TTCCGCTTCCGGGAGACGGCGGCGACACGCAGGCGGCG- 38
consensus_1888#1      TCCGCGATCCCGGCCGAGCCGATCCGCTTGCAGGCGGCGGCGGCGGGAGGGTGGTGGGGG 120
                                            ******* * ** * ********  * *  ** ** * 

consensus_1888#0      ---CGACGACGAGGATGGCGGCGTC---------GGGGAAGGAAGCGATGGTGTGGGTGC 86
consensus_1888#1      TGTCGGCGGCGGGGAGGACGGCATCATCCGCCGCGGCGCCCGCGGAGATGGAGTGGGTGC 180
                         ** ** ** *** * **** **         ** *   *  * ***** ********

consensus_1888#0      GGATACTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGAGGCCGCGCGGGCGGCGGCGG 146
consensus_1888#1      GGGTGCTGGAGGAGGGGGTGTTCCGGTTCGACGCGTCGGGGGCCGCGCGGGCGGCGGCCG 240
                      ** * ********************************** ****************** *

consensus_1888#0      GGCCCAGCCTCTCGTTCGCCGTGCCGCGGCGGCGAGAGGAGCCGCGCGCCGGAGGGGACC 206
consensus_1888#1      CGCCCAGCTTCTCGTTCGCGGAGCCGCGGCGGAGGGAGGCGGCGCGGGAGGGCGCGGATA 300
                       ******* ********** * ********** * **** * **** *  ** * ***  

consensus_1888#0      GCCCGGCGATCGTGCCGGTGTGCGAGGTGGTGGGAGATGTCCAGCGCGTCGTGGTTGAGC 266
consensus_1888#1      CCCCCGCCGTCGTGCCGGCGTGCCACGTGGTCGGGGACGCCCAGAAGGTTCTGATTAAGC 360
                       *** **  ********* **** * ***** ** ** * ****   **  ** ** ***

consensus_1888#0      TTCCTTCTGGGACATCTTTCTATGGTACTGGAGAATCAAGTGGGCCACTTGAGAGAACTG 326
consensus_1888#1      TTCCTGCTGGGACGTCTTTCTATGGCACAGGAGAAGCAAGTGGCCCGCTCGAGAGGACTG 420
                      ***** ******* *********** ** ****** ******* ** ** ***** ****

consensus_1888#0      GAAAGCTGGTTATTACTTGGAACACGGATGCATGGGATTATGGTCCAGGAACCACATCAC 386
consensus_1888#1      GGAAAAGAGTTTTTACTTGGAACACAGATGCATGGGGTTTTGGGCCAGGAACCACTTCAT 480
                      * **    *** ************* ********** ** *** *********** *** 

consensus_1888#0      TATATCAGTCACACCCTTGGGTACTGGCTGTTCTTCCTGATGGGAAGGCATTGGGAGTCC 446
consensus_1888#1      TATATCAGTCACACCCTTGGGTTTTGGCTGTCCTCCCTGATGGAAAGGCACTAAGTGTCC 540
                      **********************  ******* ** ******** ****** *  * ****

consensus_1888#0      TTGCTGACACTACTTGCCGCTGTGAGATTGACTTACGGCAAGAATCTACTATGAA-ATTT 505
consensus_1888#1      TTGCTGACACTACACAGCGTTGTGAAATTGACTTGCGAGAAGAATCTACTATAAACGTTT 600
                      *************    ** ***** ******** **  ************* **  ***

consensus_1888#0      TCTGCTTCATGCACTTACCCTGTCATACTGTTTGGACCTTTTAATACACCCTCTGAAGTT 565
consensus_1888#1      TCTGCTCCATCTGCTTATCCTATAGTTACTTTCGGGCCATTCAATACACCATCAAAAGTT 660
                      ****** ***   **** *** *  *    ** ** ** ** ******** **  *****

consensus_1888#0      ACCACATCCTTGTCTCATGCAATTGGAACTGTGTCCATGCCACCAAAATGGTCACTCGGA 625
consensus_1888#1      ATGTCATCCTTGTCCCATGCGATT------------------------------------ 684
                      *   ********** ***** ***                                    

consensus_1888#0      TACCATCAATGTCGTTATAGCTATGACTCTTCTGAGAAAGTACTGCAGGTTGTTAAAACA 685
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TTTAGAGAAAGAGGCATTCCTTGTGATGTTGTATGGATGGATATTGATTACATGGATGGT 745
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TTTAGGTGCTTTACGTTTAGCCATCGTTTCCCTGATCCGAAATGTATGGTTGATGATCTC 805
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CATTCGGTTGGCTGCAAAGCAATATGGATGCTTGACCCAGGAATCAAGAATGAGAGCGGT 865
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TACTTTGTGTTTGATAGCGGTTTAGAAAGTGATGTTTGGGTTCAAAAGGAAGACAAGCAG 925
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CCGTTCGTTGGAGAAGTATGGCCTGGTGATTGTGTTTTCCCTGATTTTACTTGTGAAAGA 985
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GCCCGCTCCTGGTGGTCTGGCTTAGTAAGGCAGTTCGTCTCTAATAGCGTTGATGGATTA 1045
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TGGAATGATATGAATGAACCTGCTGTTTTTAATACTGCCACCAAAACAATGCCAGAAAGC 1105
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      AATATCCATAGAGGAGATGCTAATATTGGTGGTCTCCAGAATCATCCGTACTACCATAAC 1165
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GTCTATGGAATGCTCATGGCAAAATCTACTTATGAGGGAATGAAATTGGCCAATCCAACT 1225
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      AAACGGCCATTTGTTCTTACTCGAGCTGGTTTTATAGGACAACAACGCTATGCTGCTATG 1285
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TGGACTGGTGATAATGTATCAAACTGGGAACATCTCCACATGAGTATAGCCATGGTTCTT 1345
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CAGTTGGGTCTTAGTGGTCAACCATTTGCAGGCCCAGATATTGGTGGGTTTGCTGGGAAT 1405
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GCTACTCCAAAACTTTTTGGAAGATGGATGGGAGTGGGTGCATTGTTTCCATTTTCTCGT 1465
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GGCCATTCTGATAAAGGAAGCTTGGACCATGAGCCGTGGTCCTTTGGGGAAGAGTGTGAG 1525
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GAGGTTTGTCGCCTTGCTTTACTAAGACGGTACCGGCTATTACCACACATTTATACTCTA 1585
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TTTTACCTTTCTCATACGAACGGAACTCCTGTTGCTGCTCCAGTTTACTTCGCAGATCCA 1645
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CAAGATTTAGAGTTAAGGAAAATTGAGACCTCATTTCTCTTGGGATCACTTCTAGTTTGT 1705
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GCAAGCACTTGTCCTGATAAAGGAGCTCATGAATCTTCACAGAAGCTGCCAAAGGGAATT 1765
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TGGTTGCCTTTTGATTTTGGAGATTCACACCCTGATCTGCCGATGATGTATTTACGAGGT 1825
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GGAGCAGTACTTCCCATAGGCCTTCCTCTCAATCATGTTGGTGAAGCAAAATTGGATGAT 1885
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      AATTTGTCATTGATTATTGCATTAGATGAAAATGGAAAAGCTGAAGGTGTCCTCTTTGAA 1945
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GATGATGGGGATGGATATGAGTTCCTTCAAGGGAATTATCTTTTGACATACTATGTTGCA 2005
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GAACTCCACTCATCAGTGGTTACTGTTAAAGTTGCCCGAACTGAAGGATCATGGAAGAGA 2065
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CCAAATCGCAACTTAAAAATAAATATATTGCTTGGAGGAGGTGCTATGGTAAGTACGCAC 2125
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GGCATTGATGGGGAAGATTTACATCTAACAATGCCTACTGAATCTGAAGTGTCAAGTCTA 2185
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GTGGCAACAAGTGAACTTGAGCTCAAAAAACGTTTTGAGATGGTTCGACCTATTCCAGAC 2245
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      ATAGATAAGCCATTAGGGAAGGAAGTGGCTGAACTTTCTGAAATACCTATTGATTTGAAC 2305
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GGCGAGGACTGGTTGGTTAAAGTTGTACCCCAGATCGGTGGTCGTATTATCTCAATGACA 2365
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CATCTTCCATCTGATTCTCAATGGCTACACAGCACAAATAGGATCAATGGGTATGAGGAA 2425
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TATAATGCGGCTGAAGATACTGCTGGCTGCACAGAAGAGTACAAAGTCATTAGGAGGTAT 2485
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CGCGAGCAATCAGGAAAAGAGGAATCTATTTGTTTGGAAGGAGATATTGGGGGTGGTTTG 2545
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      GTTCTTCAGCGCCAAATATCCATTTGTAAGGAAAACCCAAAGATTGTTAAGATCGACTCC 2605
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      AGTATTCGAGCAAAACAGGGAGCTGATCATTCTGGTGGGTTTTCAGGGTTGGCCTGTTTG 2665
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      AGGGTTCGTCCTAGTTTCATTCTTCAGTACCCTACAGAGGTTTCTGTTGTGTTTACAGCA 2725
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      AGCAACGGTATAAAGCGAGAAATACTTCCAGATTCTGGAGAATTGACATTTGAGGGAGTT 2785
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CTTCGTCCCAATGGGGAATGGATGCTAGTTGACAAACGTACGAATCTGAGCCTGGTAAAT 2845
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      TGCTTCGATCTCAGTCAGGTTAGTATATGTAAGTTGCATTGGGGAACTGATCATTTGAAC 2905
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      ATGGAACTGTGGTCGGAGCAAAGAGCAGTTTCTAAGGACACACCGTTAAGAATTTGCCAC 2965
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      CATTATGAGGTGAGAAAAATAAACTAAATCCTTGAATGCACATGGAGCAGAAATAGGATG 3025
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      ACTATCAAGGGACTTGTTTCCTGAACTATTTTACCCAATAAATGTAAACTGAACCGAGTA 3085
consensus_1888#1      ------------------------------------------------------------
                                                                                  

consensus_1888#0      ATGCCACAGTAAAGGTGTATCACCATTTT 3114
consensus_1888#1      -----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)