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Oryza sativa
cluster # 1892 cluster # 1892       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1892#0 length = 3852 sequences # 1  
consensus_1892#1 length = 809 sequences # 1  

consensusID : consensus_1892#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3852
fasta sequence
                              [AGAAAACCGAATTAAAAGAGAAAAATCTCGAAGCCTAAGCCGCCTCCCTCCTGTCCCCATCCGCCGCTCCGGCGCTCGATGCCTCCCTCCTCCGCCGCCCCCGCCACCGCCGCCGACGCAGCCACCTCGGAGCCCGTACGCGCCCCTACCCGCGCCGCAAACCCCGTCGTGCGGCGGCTCTGCCGCCTCGGGCGCTAGCCGCAGCAGGGGGGCGCCCTCCGACCGCCGGTGGTGGGGGCGTCGGCGATGCCGCCGGCTCGGAAGAAGCGCGGGGCGGCCGCGGCAGCGGCCGCGGCGGCCGCTGCGGCGCAGTGGAAGGTGGGCGACCTCGTGCTCGCCAAGATGAAGGGCTTCCCGGCGTGGCCGGCCATGATAAGTGAGCCAGAGAAATGGGGCCTTTCTTCAGCTAAAAAGAAGCTGCTGGTCTACTTTTATGGAACTAAACAGATTGCTTTCTGCAACTATACTGACCTTGAGGCATTCACTGAAGAGAAAAGAAAATCTCTTCTTGCTAAGCGACATGGCAAAGGAGCAGATTTAGTTCGAGCAGTTAAGGAAATTGTGGAGATTTATGATTCTTTGAAGAATGAGAATAATAATAAGAGTGATACGTCTGGAACAGATGTGAAGCCAGATGTTGAAGATGCTGCCCACAATAGCAATTCTGACCGTGGAGGTCGTGGGGAAGGTTCTGATTTGGTCAATGATAACAAGCAAGACAGTCGACCTACATCTTCCATGGATCACAATGTGACCAAAAGCCCTGGCTCAAATATTCCCGCAGTGGAGAGTGGCCGCTGTGTTGTGAATTCTGCACCTGACGAGCCTTCTAGTTCATTCTCAAAGAAGAGTCAAAATGATGTTCAGCAAAATATTTCTTGCGCCCTTGGTAATCTTACATCTCCACGGAAGTTGAGAAGTTCATTAGGTGCTGATCTACGACCAACAGAGGATTCTTGTGGGCCAATGAATAGTATTAATCAACCATGTGTTAATGTGATCTCTGATAACAAGCAGGTGCATTCTTTTCAGCATACATGCATCGGTGACAACAAATCAAACTCAGATTCTCTTCCAGCTAGAGAGGATTCCAGTCAAGGTACCTGCAGTAAACCTGAAGATTCTACAGTGGTTGTTGATGATGAAAGTTTGAATTCTATTGATGATGTACAAGATATTCATCATATTGAGGCATCTAAAACAGAAGTCAAACAGAATGGAACAATCGATTCCATGAGCACTACTGTCACTTTCAAGAGAAAAAGAAAGCCGCACACAAATCACATTAGTAATCCTATTATTAGTGTGGCACCAAAAACAGATGAAGAATTGCAGCCCAAGTCTAGTGGAAATCTCGCAGATTCCCCGAATTCAGGGAATGAAGTCAACAAGTCAGATGGAGACGAACACTTACCATTGGTCAAAAGGGCAAGGGTCCGTATGGGAAGAGCTCTTCTGGAGGACACAATAGTTGATGAGTGTGTTATTTCTGATAACAAAACAGAGCTGGCTACACATGAAAATAGATGTGATAAACATGACTTGTATGCAGGACTAGGGAAGGATCATTCAGCTGACATGCCCCCTAGCATGGATCCTTCATCCAAAATAGACTTGATTATGCCATCAGGAGATGCTCAGACTGCTTGCAAGAATAAAGAATACCATCCAAAGGTTTTGTCATTGGATGGCGAAGCTGCTTTGCCTCCGTCTAAACGCCTTCATCGTGCCTTAGAAGCTATGTCTGCTAATGCAACTGAAACTATCTGTAGCTCTCTCGAAGTGCAAAAATCGGAGTCAATCCTGAAAGTGAAAGGTTGTGCAGCTTCAGGAGCAAGTTCCCCTTCCAATAACTCTCTGGATGCAATTGCCAAAGTTTCAAGATCTGTAATGACTAAAAGTCCTACTATTTCTTCAAGTGGACATTCTTTAGATACCCCAGATGGCGAAAAGCATATCTTACTTAAGGATATCCCCTCTACTATTCCTTTGGATTTGAAAAATGCTTGCAGTCAAAATTCACTAAAAGAGAAAGTTGTTGAAGAACTCCACATGGATGACAAAAACATCACGCTGACTGTTTGTAGTAGGGCTGATAACAATGTCTGTGGAAAAGCTCCAACCTATTCCATGGAGTCGAAAGCTAGTGGGAATGAATCCATGGAACCAAATGGTGACCCTGCTCATGATTTTGTCAAAAACGTTAATGGGTCTGCTGAACCAGTTAGCCAAGCAAATGTTGTTCCAAGCTCCAATGGAAACTATAATTCTGTGCCACATGATGATATTCGTTTGGCTAAACCAACTGTTATTGTGTCTGACAGGACAAGTGCATCTTCTTTGGTCACTAAAATTTCATGTATTCAATCGGATGCAAGTTCCCAGACATTTGAACCGCACGGTTCTTCAGCAATCGCACTGAAAGAACACAACCACAGAATGTACCTAAAGGGTAAGAGTCTATCTCCAGACATGATGCCTATGAAAGAACTAATTGCTGCTGCTCATACTCGAAGATTCTCGCATTCAAGTTCTTTCATAGACAGTTTTCTCTGCTCCAATGGTGTTCCTGAACCTTCGGTGAATGTACCTTCACTCAAGGAAGGGTCAAGTGGTCAATGTTCACCTTCCAATCATACAATAAGGTTCGCAGCAGATAGGATTCATACTCAACAAAATAGTGGTGCAATTCCTTTTGATAATATGCAACAGAAGGGCTTGAACAAATTATCAGGTCACGATGAAGCTAGTTCAGCACGGAGGGCCTTTGAAGCTTTCCTTGGTTCCTTAACAAGAACAAAAGAAAGTATAGGCCGTGCAACACGTCTTGCTCTGGAATGTGATAAGCAAGGCATTGCTGGTGAGGTAATGGATATCATCATCGAACACCTGGAAAAAGAATCTAATTTGTATAAAAGGGTGGACCTGTTCTTCCTTGTCGATTCAATAATACAATGCTGTCGCAACCAGAAAGGTGGGGTTGGCAATGCCTTTCCTTCACTTATCCAAGCAGTCCTACCCCGGATACTATATGCTTCTGCACCTCCTGGGAATTCTGCATGGGAGAATCGAAGGCAATGTCTTAAGGTTTTGAAGCTCTGGCTTGACAGGAAAACCCTTTCAGAATACATCATTCGCCATCACATTAAAGAGCTTGAAGCTCTCAATGAGGCATCATTTGGAACCTCTCGTCGTCCATCAGGGACAGAAAGAGCTCTGAATGACCCTCTGCGGGATAACGAGGGAATGCTTGTCGATGAGTATGGAAGCAACACTGGTTTTCATCTTCCAAATTTGATTGGCACAAAACTACTTGAAGATGAGGAAGGAAGCTCCTCTGAGGAGAGGAGCTTTGAAGCTGTTACCCCTGAACATGAAGCTACAGGTGCTAATGAGCAAGAAGCATCTCAAATGCATGTGGCGAAGCATCGACTTGTCCTGGAAGAAGTAGATGGTGACCATGAAATGGAGGATTTAGCCCCATCCTCAGAAGCAGAAGGGGAAGCTATCTCCTCATGCCAACCAGATTTAACTGTTGCTAGGTGTGCAACGACCAAGCAAAATGTTGATTCAGTTCCACCCTTACCTGATGACAAACCACCTTCTCCTCCTCCATTGCCATCATCTCCACCACCTTTGCCACGTCCACCCTGTCCTGTTTTTCAAGATTCGCAGGTGCAAGGAGCATTGGCAGCTGATCGAGTTCAACCAGATCCTCCAAGAACTACCTATAATATTCAAGAGCAACACCCTCATTCTGTTGCAAACAATAGAAGCAACATGGATCCTTGTGTAGTTTCATCACATCCTCCAGCGCCCTACAATTGTGGGTACGCTGGGCATGCAAATCAG]

[+] EMBL AK121027             [AGAAAACCGAATTAAAAGAGAAAAATCTCGAAGCCTAAGCCGCCTCCCTCCTGTCCCCATCCGCCGCTCCGGCGCTCGATGCCTCCCTCCTCCGCCGCCCCCGCCACCGCCGCCGACGCAGCCACCTCGGAGCCCGTACGCGCCCCTACCCGCGCCGCAAACCCCGTCGTGCGGCGGCTCTGCCGCCTCGGGCGCTAGCCGCAGCAGGGGGGCGCCCTCCGACCGCCGGTGGTGGGGGCGTCGGCGATGCCGCCGGCTCGGAAGAAGCGCGGGGCGGCCGCGGCAGCGGCCGCGGCGGCCGCTGCGGCGCAGTGGAAGGTGGGCGACCTCGTGCTCGCCAAGATGAAGGGCTTCCCGGCGTGGCCGGCCATGATAAGTGAGCCAGAGAAATGGGGCCTTTCTTCAGCTAAAAAGAAGCTGCTGGTCTACTTTTATGGAACTAAACAGATTGCTTTCTGCAACTATACTGACCTTGAGGCATTCACTGAAGAGAAAAGAAAATCTCTTCTTGCTAAGCGACATGGCAAAGGAGCAGATTTAGTTCGAGCAGTTAAGGAAATTGTGGAGATTTATGATTCTTTGAAGAATGAGAATAATAATAAGAGTGATACGTCTGGAACAGATGTGAAGCCAGATGTTGAAGATGCTGCCCACAATAGCAATTCTGACCGTGGAGGTCGTGGGGAAGGTTCTGATTTGGTCAATGATAACAAGCAAGACAGTCGACCTACATCTTCCATGGATCACAATGTGACCAAAAGCCCTGGCTCAAATATTCCCGCAGTGGAGAGTGGCCGCTGTGTTGTGAATTCTGCACCTGACGAGCCTTCTAGTTCATTCTCAAAGAAGAGTCAAAATGATGTTCAGCAAAATATTTCTTGCGCCCTTGGTAATCTTACATCTCCACGGAAGTTGAGAAGTTCATTAGGTGCTGATCTACGACCAACAGAGGATTCTTGTGGGCCAATGAATAGTATTAATCAACCATGTGTTAATGTGATCTCTGATAACAAGCAGGTGCATTCTTTTCAGCATACATGCATCGGTGACAACAAATCAAACTCAGATTCTCTTCCAGCTAGAGAGGATTCCAGTCAAGGTACCTGCAGTAAACCTGAAGATTCTACAGTGGTTGTTGATGATGAAAGTTTGAATTCTATTGATGATGTACAAGATATTCATCATATTGAGGCATCTAAAACAGAAGTCAAACAGAATGGAACAATCGATTCCATGAGCACTACTGTCACTTTCAAGAGAAAAAGAAAGCCGCACACAAATCACATTAGTAATCCTATTATTAGTGTGGCACCAAAAACAGATGAAGAATTGCAGCCCAAGTCTAGTGGAAATCTCGCAGATTCCCCGAATTCAGGGAATGAAGTCAACAAGTCAGATGGAGACGAACACTTACCATTGGTCAAAAGGGCAAGGGTCCGTATGGGAAGAGCTCTTCTGGAGGACACAATAGTTGATGAGTGTGTTATTTCTGATAACAAAACAGAGCTGGCTACACATGAAAATAGATGTGATAAACATGACTTGTATGCAGGACTAGGGAAGGATCATTCAGCTGACATGCCCCCTAGCATGGATCCTTCATCCAAAATAGACTTGATTATGCCATCAGGAGATGCTCAGACTGCTTGCAAGAATAAAGAATACCATCCAAAGGTTTTGTCATTGGATGGCGAAGCTGCTTTGCCTCCGTCTAAACGCCTTCATCGTGCCTTAGAAGCTATGTCTGCTAATGCAACTGAAACTATCTGTAGCTCTCTCGAAGTGCAAAAATCGGAGTCAATCCTGAAAGTGAAAGGTTGTGCAGCTTCAGGAGCAAGTTCCCCTTCCAATAACTCTCTGGATGCAATTGCCAAAGTTTCAAGATCTGTAATGACTAAAAGTCCTACTATTTCTTCAAGTGGACATTCTTTAGATACCCCAGATGGCGAAAAGCATATCTTACTTAAGGATATCCCCTCTACTATTCCTTTGGATTTGAAAAATGCTTGCAGTCAAAATTCACTAAAAGAGAAAGTTGTTGAAGAACTCCACATGGATGACAAAAACATCACGCTGACTGTTTGTAGTAGGGCTGATAACAATGTCTGTGGAAAAGCTCCAACCTATTCCATGGAGTCGAAAGCTAGTGGGAATGAATCCATGGAACCAAATGGTGACCCTGCTCATGATTTTGTCAAAAACGTTAATGGGTCTGCTGAACCAGTTAGCCAAGCAAATGTTGTTCCAAGCTCCAATGGAAACTATAATTCTGTGCCACATGATGATATTCGTTTGGCTAAACCAACTGTTATTGTGTCTGACAGGACAAGTGCATCTTCTTTGGTCACTAAAATTTCATGTATTCAATCGGATGCAAGTTCCCAGACATTTGAACCGCACGGTTCTTCAGCAATCGCACTGAAAGAACACAACCACAGAATGTACCTAAAGGGTAAGAGTCTATCTCCAGACATGATGCCTATGAAAGAACTAATTGCTGCTGCTCATACTCGAAGATTCTCGCATTCAAGTTCTTTCATAGACAGTTTTCTCTGCTCCAATGGTGTTCCTGAACCTTCGGTGAATGTACCTTCACTCAAGGAAGGGTCAAGTGGTCAATGTTCACCTTCCAATCATACAATAAGGTTCGCAGCAGATAGGATTCATACTCAACAAAATAGTGGTGCAATTCCTTTTGATAATATGCAACAGAAGGGCTTGAACAAATTATCAGGTCACGATGAAGCTAGTTCAGCACGGAGGGCCTTTGAAGCTTTCCTTGGTTCCTTAACAAGAACAAAAGAAAGTATAGGCCGTGCAACACGTCTTGCTCTGGAATGTGATAAGCAAGGCATTGCTGGTGAGGTAATGGATATCATCATCGAACACCTGGAAAAAGAATCTAATTTGTATAAAAGGGTGGACCTGTTCTTCCTTGTCGATTCAATAATACAATGCTGTCGCAACCAGAAAGGTGGGGTTGGCAATGCCTTTCCTTCACTTATCCAAGCAGTCCTACCCCGGATACTATATGCTTCTGCACCTCCTGGGAATTCTGCATGGGAGAATCGAAGGCAATGTCTTAAGGTTTTGAAGCTCTGGCTTGACAGGAAAACCCTTTCAGAATACATCATTCGCCATCACATTAAAGAGCTTGAAGCTCTCAATGAGGCATCATTTGGAACCTCTCGTCGTCCATCAGGGACAGAAAGAGCTCTGAATGACCCTCTGCGGGATAACGAGGGAATGCTTGTCGATGAGTATGGAAGCAACACTGGTTTTCATCTTCCAAATTTGATTGGCACAAAACTACTTGAAGATGAGGAAGGAAGCTCCTCTGAGGAGAGGAGCTTTGAAGCTGTTACCCCTGAACATGAAGCTACAGGTGCTAATGAGCAAGAAGCATCTCAAATGCATGTGGCGAAGCATCGACTTGTCCTGGAAGAAGTAGATGGTGACCATGAAATGGAGGATTTAGCCCCATCCTCAGAAGCAGAAGGGGAAGCTATCTCCTCATGCCAACCAGATTTAACTGTTGCTAGGTGTGCAACGACCAAGCAAAATGTTGATTCAGTTCCACCCTTACCTGATGACAAACCACCTTCTCCTCCTCCATTGCCATCATCTCCACCACCTTTGCCACGTCCACCCTGTCCTGTTTTTCAAGATTCGCAGGTGCAAGGAGCATTGGCAGCTGATCGAGTTCAACCAGATCCTCCAAGAACTACCTATAATATTCAAGAGCAACACCCTCATTCTGTTGCAAACAATAGAAGCAACATGGATCCTTGTGTAGTTTCATCACATCCTCCAGCGCCCTACAATTGTGGGTACGCTGGGCATGCAAATCAG]


>consensus_1892#0 AGAAAACCGAATTAAAAGAGAAAAATCTCGAAGCCTAAGCCGCCTCCCTCCTGTCCCCAT CCGCCGCTCCGGCGCTCGATGCCTCCCTCCTCCGCCGCCCCCGCCACCGCCGCCGACGCA GCCACCTCGGAGCCCGTACGCGCCCCTACCCGCGCCGCAAACCCCGTCGTGCGGCGGCTC TGCCGCCTCGGGCGCTAGCCGCAGCAGGGGGGCGCCCTCCGACCGCCGGTGGTGGGGGCG TCGGCGATGCCGCCGGCTCGGAAGAAGCGCGGGGCGGCCGCGGCAGCGGCCGCGGCGGCC GCTGCGGCGCAGTGGAAGGTGGGCGACCTCGTGCTCGCCAAGATGAAGGGCTTCCCGGCG TGGCCGGCCATGATAAGTGAGCCAGAGAAATGGGGCCTTTCTTCAGCTAAAAAGAAGCTG CTGGTCTACTTTTATGGAACTAAACAGATTGCTTTCTGCAACTATACTGACCTTGAGGCA TTCACTGAAGAGAAAAGAAAATCTCTTCTTGCTAAGCGACATGGCAAAGGAGCAGATTTA GTTCGAGCAGTTAAGGAAATTGTGGAGATTTATGATTCTTTGAAGAATGAGAATAATAAT AAGAGTGATACGTCTGGAACAGATGTGAAGCCAGATGTTGAAGATGCTGCCCACAATAGC AATTCTGACCGTGGAGGTCGTGGGGAAGGTTCTGATTTGGTCAATGATAACAAGCAAGAC AGTCGACCTACATCTTCCATGGATCACAATGTGACCAAAAGCCCTGGCTCAAATATTCCC GCAGTGGAGAGTGGCCGCTGTGTTGTGAATTCTGCACCTGACGAGCCTTCTAGTTCATTC TCAAAGAAGAGTCAAAATGATGTTCAGCAAAATATTTCTTGCGCCCTTGGTAATCTTACA TCTCCACGGAAGTTGAGAAGTTCATTAGGTGCTGATCTACGACCAACAGAGGATTCTTGT GGGCCAATGAATAGTATTAATCAACCATGTGTTAATGTGATCTCTGATAACAAGCAGGTG CATTCTTTTCAGCATACATGCATCGGTGACAACAAATCAAACTCAGATTCTCTTCCAGCT AGAGAGGATTCCAGTCAAGGTACCTGCAGTAAACCTGAAGATTCTACAGTGGTTGTTGAT GATGAAAGTTTGAATTCTATTGATGATGTACAAGATATTCATCATATTGAGGCATCTAAA ACAGAAGTCAAACAGAATGGAACAATCGATTCCATGAGCACTACTGTCACTTTCAAGAGA AAAAGAAAGCCGCACACAAATCACATTAGTAATCCTATTATTAGTGTGGCACCAAAAACA GATGAAGAATTGCAGCCCAAGTCTAGTGGAAATCTCGCAGATTCCCCGAATTCAGGGAAT GAAGTCAACAAGTCAGATGGAGACGAACACTTACCATTGGTCAAAAGGGCAAGGGTCCGT ATGGGAAGAGCTCTTCTGGAGGACACAATAGTTGATGAGTGTGTTATTTCTGATAACAAA ACAGAGCTGGCTACACATGAAAATAGATGTGATAAACATGACTTGTATGCAGGACTAGGG AAGGATCATTCAGCTGACATGCCCCCTAGCATGGATCCTTCATCCAAAATAGACTTGATT ATGCCATCAGGAGATGCTCAGACTGCTTGCAAGAATAAAGAATACCATCCAAAGGTTTTG TCATTGGATGGCGAAGCTGCTTTGCCTCCGTCTAAACGCCTTCATCGTGCCTTAGAAGCT ATGTCTGCTAATGCAACTGAAACTATCTGTAGCTCTCTCGAAGTGCAAAAATCGGAGTCA ATCCTGAAAGTGAAAGGTTGTGCAGCTTCAGGAGCAAGTTCCCCTTCCAATAACTCTCTG GATGCAATTGCCAAAGTTTCAAGATCTGTAATGACTAAAAGTCCTACTATTTCTTCAAGT GGACATTCTTTAGATACCCCAGATGGCGAAAAGCATATCTTACTTAAGGATATCCCCTCT ACTATTCCTTTGGATTTGAAAAATGCTTGCAGTCAAAATTCACTAAAAGAGAAAGTTGTT GAAGAACTCCACATGGATGACAAAAACATCACGCTGACTGTTTGTAGTAGGGCTGATAAC AATGTCTGTGGAAAAGCTCCAACCTATTCCATGGAGTCGAAAGCTAGTGGGAATGAATCC ATGGAACCAAATGGTGACCCTGCTCATGATTTTGTCAAAAACGTTAATGGGTCTGCTGAA CCAGTTAGCCAAGCAAATGTTGTTCCAAGCTCCAATGGAAACTATAATTCTGTGCCACAT GATGATATTCGTTTGGCTAAACCAACTGTTATTGTGTCTGACAGGACAAGTGCATCTTCT TTGGTCACTAAAATTTCATGTATTCAATCGGATGCAAGTTCCCAGACATTTGAACCGCAC GGTTCTTCAGCAATCGCACTGAAAGAACACAACCACAGAATGTACCTAAAGGGTAAGAGT CTATCTCCAGACATGATGCCTATGAAAGAACTAATTGCTGCTGCTCATACTCGAAGATTC TCGCATTCAAGTTCTTTCATAGACAGTTTTCTCTGCTCCAATGGTGTTCCTGAACCTTCG GTGAATGTACCTTCACTCAAGGAAGGGTCAAGTGGTCAATGTTCACCTTCCAATCATACA ATAAGGTTCGCAGCAGATAGGATTCATACTCAACAAAATAGTGGTGCAATTCCTTTTGAT AATATGCAACAGAAGGGCTTGAACAAATTATCAGGTCACGATGAAGCTAGTTCAGCACGG AGGGCCTTTGAAGCTTTCCTTGGTTCCTTAACAAGAACAAAAGAAAGTATAGGCCGTGCA ACACGTCTTGCTCTGGAATGTGATAAGCAAGGCATTGCTGGTGAGGTAATGGATATCATC ATCGAACACCTGGAAAAAGAATCTAATTTGTATAAAAGGGTGGACCTGTTCTTCCTTGTC GATTCAATAATACAATGCTGTCGCAACCAGAAAGGTGGGGTTGGCAATGCCTTTCCTTCA CTTATCCAAGCAGTCCTACCCCGGATACTATATGCTTCTGCACCTCCTGGGAATTCTGCA TGGGAGAATCGAAGGCAATGTCTTAAGGTTTTGAAGCTCTGGCTTGACAGGAAAACCCTT TCAGAATACATCATTCGCCATCACATTAAAGAGCTTGAAGCTCTCAATGAGGCATCATTT GGAACCTCTCGTCGTCCATCAGGGACAGAAAGAGCTCTGAATGACCCTCTGCGGGATAAC GAGGGAATGCTTGTCGATGAGTATGGAAGCAACACTGGTTTTCATCTTCCAAATTTGATT GGCACAAAACTACTTGAAGATGAGGAAGGAAGCTCCTCTGAGGAGAGGAGCTTTGAAGCT GTTACCCCTGAACATGAAGCTACAGGTGCTAATGAGCAAGAAGCATCTCAAATGCATGTG GCGAAGCATCGACTTGTCCTGGAAGAAGTAGATGGTGACCATGAAATGGAGGATTTAGCC CCATCCTCAGAAGCAGAAGGGGAAGCTATCTCCTCATGCCAACCAGATTTAACTGTTGCT AGGTGTGCAACGACCAAGCAAAATGTTGATTCAGTTCCACCCTTACCTGATGACAAACCA CCTTCTCCTCCTCCATTGCCATCATCTCCACCACCTTTGCCACGTCCACCCTGTCCTGTT TTTCAAGATTCGCAGGTGCAAGGAGCATTGGCAGCTGATCGAGTTCAACCAGATCCTCCA AGAACTACCTATAATATTCAAGAGCAACACCCTCATTCTGTTGCAAACAATAGAAGCAAC ATGGATCCTTGTGTAGTTTCATCACATCCTCCAGCGCCCTACAATTGTGGGTACGCTGGG CATGCAAATCAG



consensusID : consensus_1892#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 809
fasta sequence
                              [GTGTGCATACATGGCATCGCTGGAGAGGCGATTGATATTATCGTTGAACGCTTGGAGAAGGAGTCGAATTTATATAAGAGAGTGGACCTTTTCTTTCTTGTGGATTCAATAACTCAATACTCTCGTAACCAGAAAGGTGGAGCTGGAGATGTTTACCCGTCTCTTATCCAGGCAGTTCTACCTCGATTACTTTATGCTGCTGCACCTCCTGGAAATTCGGCATGGGAGAATCGAAGGCAATGTCTAAAGGTTTTGAAGCTTTGGCTTGAGAGGAAAACACTCCCAGAGTACATCATTCGCCACCATATTAGAGAACTTGAGGTTATCAATGAGGCATCTTTTGGAAGTTCTCGCCGTCCTTCAAGGACAGAAAGAGCTTTAAATGACCCGTTGCGTGACAACGAAGGAATGCTTGTTGATGAGTATGGCAGCAATGCTGGTTTTCAACTACCAAACTTAATTTCCACAAAAGTACTTGAAGATGAGGACGGAAGCTCCTCTGAAGATAGAAGTTTTGAAGCTGTTACACCTGAACATGATGCTCCTTGCACTGATGAGAAGGAAGAATCACAAATGCCCGCAGAAAAGCATCATCGCATCCTTGAAGAAGTTGATGGCGAGCTTGAGATGGAGGATGTAGCTCCACCATCTGATGTTGAAGCTAGCACCAGATGTCGGCCAGAACAAATTGATACCAAATGCAGAACATCTGATCGACATACTTTAGGTCCTCCCCTCCCTGATGATAGGCCTCCATCGCCCCCGCCATTGCCATCATCTCCTCCACCTGTTCCGCCACCACCACCTGC]

[+] EMBL CB629266             [GTGTGCATACATGGCATCGCTGGAGAGGCGATTGATATTATCGTTGAACGCTTGGAGAAGGAGTCGAATTTATATAAGAGAGTGGACCTTTTCTTTCTTGTGGATTCAATAACTCAATACTCTCGTAACCAGAAAGGTGGAGCTGGAGATGTTTACCCGTCTCTTATCCAGGCAGTTCTACCTCGATTACTTTATGCTGCTGCACCTCCTGGAAATTCGGCATGGGAGAATCGAAGGCAATGTCTAAAGGTTTTGAAGCTTTGGCTTGAGAGGAAAACACTCCCAGAGTACATCATTCGCCACCATATTAGAGAACTTGAGGTTATCAATGAGGCATCTTTTGGAAGTTCTCGCCGTCCTTCAAGGACAGAAAGAGCTTTAAATGACCCGTTGCGTGACAACGAAGGAATGCTTGTTGATGAGTATGGCAGCAATGCTGGTTTTCAACTACCAAACTTAATTTCCACAAAAGTACTTGAAGATGAGGACGGAAGCTCCTCTGAAGATAGAAGTTTTGAAGCTGTTACACCTGAACATGATGCTCCTTGCACTGATGAGAAGGAAGAATCACAAATGCCCGCAGAAAAGCATCATCGCATCCTTGAAGAAGTTGATGGCGAGCTTGAGATGGAGGATGTAGCTCCACCATCTGATGTTGAAGCTAGCACCAGATGTCGGCCAGAACAAATTGATACCAAATGCAGAACATCTGATCGACATACTTTAGGTCCTCCCCTCCCTGATGATAGGCCTCCATCGCCCCCGCCATTGCCATCATCTCCTCCACCTGTTCCGCCACCACCACCTGC]


>consensus_1892#1 GTGTGCATACATGGCATCGCTGGAGAGGCGATTGATATTATCGTTGAACGCTTGGAGAAG GAGTCGAATTTATATAAGAGAGTGGACCTTTTCTTTCTTGTGGATTCAATAACTCAATAC TCTCGTAACCAGAAAGGTGGAGCTGGAGATGTTTACCCGTCTCTTATCCAGGCAGTTCTA CCTCGATTACTTTATGCTGCTGCACCTCCTGGAAATTCGGCATGGGAGAATCGAAGGCAA TGTCTAAAGGTTTTGAAGCTTTGGCTTGAGAGGAAAACACTCCCAGAGTACATCATTCGC CACCATATTAGAGAACTTGAGGTTATCAATGAGGCATCTTTTGGAAGTTCTCGCCGTCCT TCAAGGACAGAAAGAGCTTTAAATGACCCGTTGCGTGACAACGAAGGAATGCTTGTTGAT GAGTATGGCAGCAATGCTGGTTTTCAACTACCAAACTTAATTTCCACAAAAGTACTTGAA GATGAGGACGGAAGCTCCTCTGAAGATAGAAGTTTTGAAGCTGTTACACCTGAACATGAT GCTCCTTGCACTGATGAGAAGGAAGAATCACAAATGCCCGCAGAAAAGCATCATCGCATC CTTGAAGAAGTTGATGGCGAGCTTGAGATGGAGGATGTAGCTCCACCATCTGATGTTGAA GCTAGCACCAGATGTCGGCCAGAACAAATTGATACCAAATGCAGAACATCTGATCGACAT ACTTTAGGTCCTCCCCTCCCTGATGATAGGCCTCCATCGCCCCCGCCATTGCCATCATCT CCTCCACCTGTTCCGCCACCACCACCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1892#0      AGAAAACCGAATTAAAAGAGAAAAATCTCGAAGCCTAAGCCGCCTCCCTCCTGTCCCCAT 60
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      CCGCCGCTCCGGCGCTCGATGCCTCCCTCCTCCGCCGCCCCCGCCACCGCCGCCGACGCA 120
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GCCACCTCGGAGCCCGTACGCGCCCCTACCCGCGCCGCAAACCCCGTCGTGCGGCGGCTC 180
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TGCCGCCTCGGGCGCTAGCCGCAGCAGGGGGGCGCCCTCCGACCGCCGGTGGTGGGGGCG 240
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TCGGCGATGCCGCCGGCTCGGAAGAAGCGCGGGGCGGCCGCGGCAGCGGCCGCGGCGGCC 300
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GCTGCGGCGCAGTGGAAGGTGGGCGACCTCGTGCTCGCCAAGATGAAGGGCTTCCCGGCG 360
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TGGCCGGCCATGATAAGTGAGCCAGAGAAATGGGGCCTTTCTTCAGCTAAAAAGAAGCTG 420
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      CTGGTCTACTTTTATGGAACTAAACAGATTGCTTTCTGCAACTATACTGACCTTGAGGCA 480
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TTCACTGAAGAGAAAAGAAAATCTCTTCTTGCTAAGCGACATGGCAAAGGAGCAGATTTA 540
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GTTCGAGCAGTTAAGGAAATTGTGGAGATTTATGATTCTTTGAAGAATGAGAATAATAAT 600
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AAGAGTGATACGTCTGGAACAGATGTGAAGCCAGATGTTGAAGATGCTGCCCACAATAGC 660
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AATTCTGACCGTGGAGGTCGTGGGGAAGGTTCTGATTTGGTCAATGATAACAAGCAAGAC 720
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AGTCGACCTACATCTTCCATGGATCACAATGTGACCAAAAGCCCTGGCTCAAATATTCCC 780
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GCAGTGGAGAGTGGCCGCTGTGTTGTGAATTCTGCACCTGACGAGCCTTCTAGTTCATTC 840
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TCAAAGAAGAGTCAAAATGATGTTCAGCAAAATATTTCTTGCGCCCTTGGTAATCTTACA 900
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TCTCCACGGAAGTTGAGAAGTTCATTAGGTGCTGATCTACGACCAACAGAGGATTCTTGT 960
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GGGCCAATGAATAGTATTAATCAACCATGTGTTAATGTGATCTCTGATAACAAGCAGGTG 1020
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      CATTCTTTTCAGCATACATGCATCGGTGACAACAAATCAAACTCAGATTCTCTTCCAGCT 1080
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AGAGAGGATTCCAGTCAAGGTACCTGCAGTAAACCTGAAGATTCTACAGTGGTTGTTGAT 1140
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GATGAAAGTTTGAATTCTATTGATGATGTACAAGATATTCATCATATTGAGGCATCTAAA 1200
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ACAGAAGTCAAACAGAATGGAACAATCGATTCCATGAGCACTACTGTCACTTTCAAGAGA 1260
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AAAAGAAAGCCGCACACAAATCACATTAGTAATCCTATTATTAGTGTGGCACCAAAAACA 1320
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GATGAAGAATTGCAGCCCAAGTCTAGTGGAAATCTCGCAGATTCCCCGAATTCAGGGAAT 1380
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GAAGTCAACAAGTCAGATGGAGACGAACACTTACCATTGGTCAAAAGGGCAAGGGTCCGT 1440
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATGGGAAGAGCTCTTCTGGAGGACACAATAGTTGATGAGTGTGTTATTTCTGATAACAAA 1500
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ACAGAGCTGGCTACACATGAAAATAGATGTGATAAACATGACTTGTATGCAGGACTAGGG 1560
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AAGGATCATTCAGCTGACATGCCCCCTAGCATGGATCCTTCATCCAAAATAGACTTGATT 1620
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATGCCATCAGGAGATGCTCAGACTGCTTGCAAGAATAAAGAATACCATCCAAAGGTTTTG 1680
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TCATTGGATGGCGAAGCTGCTTTGCCTCCGTCTAAACGCCTTCATCGTGCCTTAGAAGCT 1740
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATGTCTGCTAATGCAACTGAAACTATCTGTAGCTCTCTCGAAGTGCAAAAATCGGAGTCA 1800
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATCCTGAAAGTGAAAGGTTGTGCAGCTTCAGGAGCAAGTTCCCCTTCCAATAACTCTCTG 1860
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GATGCAATTGCCAAAGTTTCAAGATCTGTAATGACTAAAAGTCCTACTATTTCTTCAAGT 1920
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GGACATTCTTTAGATACCCCAGATGGCGAAAAGCATATCTTACTTAAGGATATCCCCTCT 1980
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ACTATTCCTTTGGATTTGAAAAATGCTTGCAGTCAAAATTCACTAAAAGAGAAAGTTGTT 2040
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GAAGAACTCCACATGGATGACAAAAACATCACGCTGACTGTTTGTAGTAGGGCTGATAAC 2100
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AATGTCTGTGGAAAAGCTCCAACCTATTCCATGGAGTCGAAAGCTAGTGGGAATGAATCC 2160
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATGGAACCAAATGGTGACCCTGCTCATGATTTTGTCAAAAACGTTAATGGGTCTGCTGAA 2220
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      CCAGTTAGCCAAGCAAATGTTGTTCCAAGCTCCAATGGAAACTATAATTCTGTGCCACAT 2280
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GATGATATTCGTTTGGCTAAACCAACTGTTATTGTGTCTGACAGGACAAGTGCATCTTCT 2340
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TTGGTCACTAAAATTTCATGTATTCAATCGGATGCAAGTTCCCAGACATTTGAACCGCAC 2400
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GGTTCTTCAGCAATCGCACTGAAAGAACACAACCACAGAATGTACCTAAAGGGTAAGAGT 2460
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      CTATCTCCAGACATGATGCCTATGAAAGAACTAATTGCTGCTGCTCATACTCGAAGATTC 2520
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      TCGCATTCAAGTTCTTTCATAGACAGTTTTCTCTGCTCCAATGGTGTTCCTGAACCTTCG 2580
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      GTGAATGTACCTTCACTCAAGGAAGGGTCAAGTGGTCAATGTTCACCTTCCAATCATACA 2640
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATAAGGTTCGCAGCAGATAGGATTCATACTCAACAAAATAGTGGTGCAATTCCTTTTGAT 2700
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AATATGCAACAGAAGGGCTTGAACAAATTATCAGGTCACGATGAAGCTAGTTCAGCACGG 2760
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AGGGCCTTTGAAGCTTTCCTTGGTTCCTTAACAAGAACAAAAGAAAGTATAGGCCGTGCA 2820
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ACACGTCTTGCTCTGGAATGTGATAAGCAAGGCATTGCTGGTGAGGTAATGGATATCATC 2880
consensus_1892#1      -----------------GTGTG-CATACATGGCATCGCTGGAGAGGCGATTGATATTATC 42
                                        ****  *  ** ***** ***** ****  ** ***** ***

consensus_1892#0      ATCGAACACCTGGAAAAAGAATCTAATTTGTATAAAAGGGTGGACCTGTTCTTCCTTGTC 2940
consensus_1892#1      GTTGAACGCTTGGAGAAGGAGTCGAATTTATATAAGAGAGTGGACCTTTTCTTTCTTGTG 102
                       * **** * **** ** ** ** ***** ***** ** ******** ***** ***** 

consensus_1892#0      GATTCAATAATACAATGCTGTCGCAACCAGAAAGGTGGGGTTGGCAATGCCTTTCCTTCA 3000
consensus_1892#1      GATTCAATAACTCAATACTCTCGTAACCAGAAAGGTGGAGCTGGAGATGTTTACCCGTCT 162
                      **********  **** ** *** ************** * ***  ***  *  ** ** 

consensus_1892#0      CTTATCCAAGCAGTCCTACCCCGGATACTATATGCTTCTGCACCTCCTGGGAATTCTGCA 3060
consensus_1892#1      CTTATCCAGGCAGTTCTACCTCGATTACTTTATGCTGCTGCACCTCCTGGAAATTCGGCA 222
                      ******** ***** ***** **  **** ****** ************* ***** ***

consensus_1892#0      TGGGAGAATCGAAGGCAATGTCTTAAGGTTTTGAAGCTCTGGCTTGACAGGAAAACCCTT 3120
consensus_1892#1      TGGGAGAATCGAAGGCAATGTCTAAAGGTTTTGAAGCTTTGGCTTGAGAGGAAAACACTC 282
                      *********************** ************** ******** ******** ** 

consensus_1892#0      TCAGAATACATCATTCGCCATCACATTAAAGAGCTTGAAGCTCTCAATGAGGCATCATTT 3180
consensus_1892#1      CCAGAGTACATCATTCGCCACCATATTAGAGAACTTGAGGTTATCAATGAGGCATCTTTT 342
                       **** ************** ** **** *** ***** * * ************* ***

consensus_1892#0      GGAACCTCTCGTCGTCCATCAGGGACAGAAAGAGCTCTGAATGACCCTCTGCGGGATAAC 3240
consensus_1892#1      GGAAGTTCTCGCCGTCCTTCAAGGACAGAAAGAGCTTTAAATGACCCGTTGCGTGACAAC 402
                      ****  ***** ***** *** ************** * ********  **** ** ***

consensus_1892#0      GAGGGAATGCTTGTCGATGAGTATGGAAGCAACACTGGTTTTCATCTTCCAAATTTGATT 3300
consensus_1892#1      GAAGGAATGCTTGTTGATGAGTATGGCAGCAATGCTGGTTTTCAACTACCAAACTTAATT 462
                      ** *********** *********** *****  ********** ** ***** ** ***

consensus_1892#0      GGCACAAAACTACTTGAAGATGAGGAAGGAAGCTCCTCTGAGGAGAGGAGCTTTGAAGCT 3360
consensus_1892#1      TCCACAAAAGTACTTGAAGATGAGGACGGAAGCTCCTCTGAAGATAGAAGTTTTGAAGCT 522
                        ******* **************** ************** ** ** ** *********

consensus_1892#0      GTTACCCCTGAACATGAAGCTACAGGTGCTAATGAGCAAGAAGCATCTCAAATGCATGTG 3420
consensus_1892#1      GTTACACCTGAACATGATGCTCCTTGCACTGATGAGAAGGAAGAATCACAAATGCCCGCA 582
                      ***** *********** *** *  *  ** ***** * **** *** *******  *  

consensus_1892#0      GCGAAGCATCGACTTGTCCTGGAAGAAGTAGATGGTGACCATGAAATGGAGGATTTAGCC 3480
consensus_1892#1      GAAAAGCATCATCGCATCCTTGAAGAAGTTGATGGCGAGCTTGAGATGGAGGATGTAGCT 642
                      *  *******  *   **** ******** ***** ** * *** ********* **** 

consensus_1892#0      CCATCCTCAGAAGCAGAAGGGGAAGCTATCTCCTCATGCCAACCAGATTTAACTGTTGCT 3540
consensus_1892#1      CCACCATCTGATGTTGAAG------CTAGCACCAGATGTCGGCCAGAACAAATTGATACC 696
                      *** * ** ** *  ****      *** * **  *** *  *****   ** ** * * 

consensus_1892#0      AGGTGTGCAACGACCAAGCAAAATGTTGATTCAGTTCCACCCTTACCTGATGACAAACCA 3600
consensus_1892#1      AAATGCAGAACATCTGATCGACATACT---TTAGGTCCTCCCCTCCCTGATGATAGGCCT 753
                      *  **   ***  *  * * * **  *   * ** *** *** * ******** *  ** 

consensus_1892#0      CCTTCTCCTCCTCCATTGCCATCATCTCCACCACCTTTGCCACGTCCACCCTGTCCTGTT 3660
consensus_1892#1      CCATCGCCCCCGCCATTGCCATCATCTCCTCCACCTGTTCCGCCACCACCACCTGC---- 809
                      ** ** ** ** ***************** ****** * ** *  *****   * *    

consensus_1892#0      TTTCAAGATTCGCAGGTGCAAGGAGCATTGGCAGCTGATCGAGTTCAACCAGATCCTCCA 3720
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      AGAACTACCTATAATATTCAAGAGCAACACCCTCATTCTGTTGCAAACAATAGAAGCAAC 3780
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      ATGGATCCTTGTGTAGTTTCATCACATCCTCCAGCGCCCTACAATTGTGGGTACGCTGGG 3840
consensus_1892#1      ------------------------------------------------------------
                                                                                  

consensus_1892#0      CATGCAAATCAG 3852
consensus_1892#1      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)