cluster # 1908

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Oryza sativa
cluster # 1908 cluster # 1908 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1908#0 length = 1073 sequences # 2

consensusID : consensus_1908#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1073
fasta sequence

                              [AGGCTAGTTTCTTCTCGTCGGCGAAGGCATCGTTCGGATTTCACGGCGAGGTCGCCATGGGATGCGCGTCGTCGAAGCAGTTCAAGCGGCCGCCGGGGTACGAGGAGCCGGCCGTCCTCGCCGCCCAAACCACCTTTACGGTGAACGAGGTGGAGGCGCTGCGCGAGCTGTACAACAAGATGAGCTATTCCATCATCAAGGACGGCCTCATCCACAAGGAGGAGTTTCAGCTTGCCTTGTTCAGGAACAGCAGAAAGGCGAATCTCTTCGCAGACAGGGTGTTTGATTTGTTTGATCTGAAGAGAAATGGGGTAATCGAATTTGGGGAGTTTGTACGGTCGCTCAGTGTGTTCCACCCAAAAGCGCCTAAATCAGAGAAGACTGCGTTTGCATTCAAGCTCTATGATCTAAGAGGGACAGGATATATTGAGAAAGAAGAGCTCAGGGAGATGGTCTTGGCACTTCTAGATGAATCAGACCTACATCTTTCCGAATGCGCTGTCGAGGCAATTGTCGATAATACATTCAGTCAAGCAGACTCAAATGGAGATGGCAGGATAGACCCTGAGGAATGGGAAGAATTTGTTAAGGCGAACCCGGCATCACTAAGGAACATGTCACTTCCCTATTTGCAGGACATTACCATGGCGTTCCCGAGCTTTGTAATGCATTCAGAAGCCCATGACTGAAAATACAGATCCCATTGGAACGTATTACAAGCAACCAAAAGTTCTCCATTGTTGCTGAAGCTCGAGGCAGCTCAATTTGTTGGATGCGCCGGAGTTCAGAAGCAGGCTGCAACTGAAATGCGTTGACCGTCATCGCATGAGTGAATGACGCCATGAACAACAGAATGGCATCTGATAATAAGTATCAGAGTGGCTTTTCTTCTGCTTATGCGAGGGATACAGAGGGCCCAGCAGCAAGATTGTTCAACGAAGCAACACAAGCAAAATTAAGCACTCTGACCTGCTGAAATGCCTTCTTTTTTTCCCGTCTTGTATGTATAGTTGTGAGTCAGAAGTGACACTGGTGACCATTGACCTATAGTTGAAGAGATGCAGGAGTGTTCA]

[+] EMBL AK101368             [AGGCTAGTTTCTTCTCGTCGGCGAAGGCATCGTTCGGATTTCACGGCGAGGTCGCCATGGGATGCGCGTCGTCGAAGCAGTTCAAGCGGCCGCCGGGGTACGAGGAGCCGGCCGTCCTCGCCGCCCAAACCACCTTTACGGTGAACGAGGTGGAGGCGCTGCGCGAGCTGTACAACAAGATGAGCTATTCCATCATCAAGGACGGCCTCATCCACAAGGAGGAGTTTCAGCTTGCCTTGTTCAGGAACAGCAGAAAGGCGAATCTCTTCGCAGACAGGGTGTTTGATTTGTTTGATCTGAAGAGAAATGGGGTAATCGAATTTGGGGAGTTTGTACGGTCGCTCAGTGTGTTCCACCCAAAAGCGCCTAAATCAGAGAAGACTGCGTTTGCATTCAAGCTCTATGATCTAAGAGGGACAGGATATATTGAGAAAGAAGAGCTCAGGGAGATGGTCTTGGCACTTCTAGATGAATCAGACCTACATCTTTCCGAATGCGCTGTCGAGGCAATTGTCGATAATACATTCAGTCAAGCAGACTCAAATGGAGATGGCAGGATAGACCCTGAGGAATGGGAAGAATTTGTTAAGGCGAACCCGGCATCACTAAGGAACATGTCACTTCCCTATTTGCAGGACATTACCATGGCGTTCCCGAGCTTTGTAATGCATTCAGAAGCCCATGACTGAAAATACAGATCCCATTGGAACGTATTACAAGCAACCAAAAGTTCTCCATTGTTGCTGAAGCTCGAGGCAGCTCAATTTGTTGGATGCGCCGGAGTTCAGAAGCAGGCTGCAACTGAAATGCGTTGACCGTCATCGCATGAGTGAATGACGCCATGAACAACAGAATGGCATCTGATAATAAGTATCAGAGTGGCTTTTCTTCTGCTTATGCGAGGGATACAGAGGGCCCAGCAGCAAGATTGTTCAACGAAGCAACACAAGCAAAATTAAGCACTCTGACCTGCTGAAATGCCTTCTTTTTTTCCCGTCTTGTATGTATAGTTGTGAGTCAGAAGTGACACTGGTGACCATTGACCTATAGTTGAAGAGATGCAGGAGTGTTCA]
[+] EMBL C27482               [                                                                                                                                                                                                                                                                                                                                                                                               GCNTTTNCNTTCAAGCTCTATGATCTAAGAGGGACAGGATATATTGAGAAAGAAGAGCTCAGGGAGATGGTCTTGGCACTTCTAGATGANTCAAACCTACATCTTTCCGAATGCCCTGTCGAGGCAATTNTCGATAATACATTCAGTCAAGCAGACTCAAATGGAGATGGCAGGATAGACCCTGAGGAATGGGAAGANTTTNTNAAGGCGAACCCGGCATCACTAAGGAACATGTCACTTCCCTATTTGCAGGACATTACCATGGCGTTCCCGAGCTTTGTAATGCATTCAGAAG CCATGACTGAAAATNCAGNTCCCATTGGGACGGTTTTCAAGNAACCAAAAGTTCTCC                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_1908#0
AGGCTAGTTTCTTCTCGTCGGCGAAGGCATCGTTCGGATTTCACGGCGAGGTCGCCATGG
GATGCGCGTCGTCGAAGCAGTTCAAGCGGCCGCCGGGGTACGAGGAGCCGGCCGTCCTCG
CCGCCCAAACCACCTTTACGGTGAACGAGGTGGAGGCGCTGCGCGAGCTGTACAACAAGA
TGAGCTATTCCATCATCAAGGACGGCCTCATCCACAAGGAGGAGTTTCAGCTTGCCTTGT
TCAGGAACAGCAGAAAGGCGAATCTCTTCGCAGACAGGGTGTTTGATTTGTTTGATCTGA
AGAGAAATGGGGTAATCGAATTTGGGGAGTTTGTACGGTCGCTCAGTGTGTTCCACCCAA
AAGCGCCTAAATCAGAGAAGACTGCGTTTGCATTCAAGCTCTATGATCTAAGAGGGACAG
GATATATTGAGAAAGAAGAGCTCAGGGAGATGGTCTTGGCACTTCTAGATGAATCAGACC
TACATCTTTCCGAATGCGCTGTCGAGGCAATTGTCGATAATACATTCAGTCAAGCAGACT
CAAATGGAGATGGCAGGATAGACCCTGAGGAATGGGAAGAATTTGTTAAGGCGAACCCGG
CATCACTAAGGAACATGTCACTTCCCTATTTGCAGGACATTACCATGGCGTTCCCGAGCT
TTGTAATGCATTCAGAAGCCCATGACTGAAAATACAGATCCCATTGGAACGTATTACAAG
CAACCAAAAGTTCTCCATTGTTGCTGAAGCTCGAGGCAGCTCAATTTGTTGGATGCGCCG
GAGTTCAGAAGCAGGCTGCAACTGAAATGCGTTGACCGTCATCGCATGAGTGAATGACGC
CATGAACAACAGAATGGCATCTGATAATAAGTATCAGAGTGGCTTTTCTTCTGCTTATGC
GAGGGATACAGAGGGCCCAGCAGCAAGATTGTTCAACGAAGCAACACAAGCAAAATTAAG
CACTCTGACCTGCTGAAATGCCTTCTTTTTTTCCCGTCTTGTATGTATAGTTGTGAGTCA
GAAGTGACACTGGTGACCATTGACCTATAGTTGAAGAGATGCAGGAGTGTTCA

clustalw multiple alignements is not computed in this case