cluster # 1910

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Oryza sativa
cluster # 1910 cluster # 1910 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1910#0 length = 591 sequences # 2

consensusID : consensus_1910#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 591
fasta sequence

                              [TTTTCTTCTACATTCGTCTTAGTCGAACATTCTTCTTTCATTCAAAAATGGCAGCAGTTTTGGCAAATAATTTCCACAATCTAAACACTAATCAATGGATTGGAGAGAACGTTCCAAATCAACTTGTAAATGTTACTGCGCAAATTGCAAGACCATGTCCAGTCGTTCCACCTGTCGTTGTTTCTTATGTGTATGGTTCACCAGTTGGTTGGAACGCAGTGCTTGTTGGCTTATTATCATCATTACTTCTTTTGGTCTTTTTGCTAACATCACTTTACTATTTGGTATTTCGTCGCCGTTATTTCAGCGATGTATCCGATCGTACATCGGGTATTCTCGTTGACAAAGAAGCAGCTGCAAAAATACCTGTTTCATCTGCATCTCANACTGCTACGACAACATTCATCAATGAACCAGGNCAAGAAACAAAAGTCTCAACATATACTGAACAAGCTTCAGGACCCGTACCGGCTGGTGATTTTGTTGTAAGTATGCCCGCAGTTGGTAATGGACATACACCATCACCTACAAACGGTCTTTTGGTCAATGGGTACA-CCGATCCNAGTGAAC-TCATTTACTTCAACATGAACA]

[+] EMBL CA756136             [TTTTCTTCTACATTCGTCTTAGTCGAACATTCTTCTTTCATTCAAAAATGGCAGCAGTTTTGGCAAATAATTTCCACAATCTAAACACTAATCAATGGATTGGAGAGAACGTTCCAAATCAACTTGTAAATGTTACTGCGCAAATTGCAAGACCATGTCCAGTCGTTCCACCTGTCGTTGTTTCTTATGTGTATGGTTCACCAGTTGGTTGGAACGCAGTGCTTGTTGGCTTATTATCATCATTACTTCTTTTGGTCTTTTTGCTAACATCACTTTACTATTTGGTATTTCGTCGCCGTTATTTCAGCGATGTATCCGATCGTACATCGGGTATTCTCGTTGACAAAGAAGCAGCTGCAAAAATACCTGTTTCATCTGCATCTCANACTGCTACGACAACATTCATCAATGAACCAGGNCAAGAAACAAAAGTCTCAACATATACTGAACAAGCTTCAGGACCCGTACCGGCTGGTGATTTTGTTGTAAGTATGCCCGCAGTTGGTAATGGACATACACCATCACCTACAAACGGTCTTTTGGTCAATGGGTACA CCGATCCNAGTGAAC TCATTTACTTCAACATGAACA]
[+] EMBL CA756139             [TTTTCTTCTACATTCGTCTTAGTCGAACATTCTTCTTTCATTCAAAAATGGCAGCAGTTTTGGCAAATAATTTCCACAATCTAAACACTAATCAATGGATTGGAGAGAACGTTCCAAATCAACTTGTAAATGTTACTGCGCAAATTGCAAGACCATGTCCAGTCGTTCCACCTGTCGTTGTTTCTTATGTGTATGGTTCACCAGTTGGTTGGAACGCAGTGCTTGTTGGCTTATTATCATCATTACTTCTTTTGGTCTTTTTGCTAACATCACTTTACTATTTGGTATTTCGTCGCCGTTATTTCAGCGATGTATCCGATCGTACATCGGGTATTCTCGTTGACAAAGAAGCAGCTGCAAAAATACCTGTTTCATCTGCATCTCANACTGCTACGACNACATTCATCAATGAACCAGGCAAAGAAACAAAAGTCTCAACATATACTGAACAAGCTTCAGGACCCGTACCGGCTGGTGATTTTGTTGTAAGTATGCCCGCAGTTGGTAATGGACATACACCATCACCTACNAACGGTCTTTTGGTCAATGGTAACACCCGATCC AGTGAACTTCATTTACTTCAc        ]




>consensus_1910#0
TTTTCTTCTACATTCGTCTTAGTCGAACATTCTTCTTTCATTCAAAAATGGCAGCAGTTT
TGGCAAATAATTTCCACAATCTAAACACTAATCAATGGATTGGAGAGAACGTTCCAAATC
AACTTGTAAATGTTACTGCGCAAATTGCAAGACCATGTCCAGTCGTTCCACCTGTCGTTG
TTTCTTATGTGTATGGTTCACCAGTTGGTTGGAACGCAGTGCTTGTTGGCTTATTATCAT
CATTACTTCTTTTGGTCTTTTTGCTAACATCACTTTACTATTTGGTATTTCGTCGCCGTT
ATTTCAGCGATGTATCCGATCGTACATCGGGTATTCTCGTTGACAAAGAAGCAGCTGCAA
AAATACCTGTTTCATCTGCATCTCANACTGCTACGACAACATTCATCAATGAACCAGGNC
AAGAAACAAAAGTCTCAACATATACTGAACAAGCTTCAGGACCCGTACCGGCTGGTGATT
TTGTTGTAAGTATGCCCGCAGTTGGTAATGGACATACACCATCACCTACAAACGGTCTTT
TGGTCAATGGGTACACCGATCCNAGTGAACTCATTTACTTCAACATGAACA

clustalw multiple alignements is not computed in this case