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Oryza sativa
cluster # 1913 cluster # 1913       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1913#0 length = 3098 sequences # 1  
 consensus_1913#1 length = 714 sequences # 1  
consensusID : consensus_1913#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3098
fasta sequence 
                              [GCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTTCTCCGATCGCGGCGGAATGGACGGCGGCGCGGCCACGAACGCATCTGGAGTCGCCGCGGCGGCAGCGGCGGCGGGGAACGGCGTGCAGGCGGGGGGCGGGGGCGAGAGGGCGGAGGACGCGTCGAAGCAGAACCTGGCGCTGATGATGGCCTCGATCCAGAGGACGCTGGGGCTCCTCCACCAGCTCAACCTCAACGTCTCCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGGAGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCGTCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCTGCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGCATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATACGCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATGGTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTAAGGATTTTTATTTATGCTTTGCTTTAGGTATGATTTGTGAATTAACAACTCAAATTTCCTTGTATCAACTGTTTCTTACCAATAGATCTGTATGTATTCTCGTATTGTGTGCCACATCATTTGTTCAGCTTACCTAATGATTGAAGTAATAACCCTGTAATCTATCATCCTACATGAGCATAAATTATCTGCAGCTCAGCTAGCTCAAGGGAAAAATGGTTGCTTATTAGGTGCTGCATGCTGAGTAGTTGTGTTTACCTTATTTTGGTTTATCCAAAGAGTAGCACCATCTGGACTAGGAATGCCATGCCTCATCTATCAGTCAATAGACTATTATGCAACTGACAATTAATAGTAAATCTGTAAGCTTATATCTTATCATTCGTCTGATCTGATAACCATTTCCTCATTCTGGTCCTACTGGATACTGCTGTGTACTCCATTCATTTGCTAATCCAGTTGGCAGTTGCCCCTAGATTCTTTCTGCAATGTAGTCTATGGTCCTATATAGTACATAGGATAGATTGCCTTCTGGTTTGTTAAACAGAGAAACGGTTGTCTTATGCTGTGTTGGCTGGTCGATTTCCCTTTCGAAGTCAGCTAGTTGAAATTAGGAAATTCATCTGTATACTTGGGGCGCTTCAATGTCTAATCTTTCCTATTTATGATTTTGACTATTATCACCAGTTTATCACATGAATGCAATTAATTCAGGTACTTAAATCGTTTGGTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATGGAATTTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGACTGCATTAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTATATAAGCATATATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGATCGTATGATGTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGATCATTTTCTCATATTTCTTCTTTGATGGCTGTACTACCCTCAGTCTTTGGATTGTTCCAAGCATGGGAGCTTTTTAAATTAACGAGTCACGCCTGCCCAGATAAGTCCCAAAAGCTATGTATCCAAATCATTTAGTCCAAATCATTTAGTCGTTGTGCATCAGTAATCAAGTCAAAGATGCTATTGGTTTCAAACTCCCAGTACAACACGTCCATGGATGAAGATGAGAGTGCAAGACCCTGTTTGTTCCACTGAGTTTCATCTCTAGGAATTCCATACAAATCTTTGTTTTAATTATTACTAGTATTACGTAAATCATGTGTTCCAGATATGTAGTAAATTGATGTACTACCATGCGTGGTGCTCATCTTTTGAATGATCTGCAACTTATCTGGAGTTGACACCTAATCGCATCTAAAGTTGAATATCCAAATTGAAACTGCGTGCTTGGAGTCTTTCAGTCTCTTATTGGAGTGTATCAAGCATCCACTGAGAAAAGCCTCTGTATATTCTAACTCATCCAAGGTAATGTCACACGAGTAAGTGATAAGCAATCCACGTGGACAACGGCTTGATGACAGAACCCTTGCATTCACATCACAGGGTGTACAAGTGGCTACAATTCTGTGACTAGGATTGCAATTTGCTTATAATATGTTGGGCTCATGAGTTGTCACATTTGAGTGGAACCCATATCGGTTAGATGGAAGCAATGCTAACCACCCTCAAGATAACACGACAAGCGCCTGTGATATTCTGGAGCTAGCAAGCTCAACTCAATATTTTTTCCTCTCCATTTTTCTTTTTCAGAGTTTCATACTCTTGGCTGCTTGGCTAGTGCCCATCGAACATAGAATTTGTGTTCAACGATTCTGATCGTCACTGTGTCTGAACAGTGACATGTAATTATGCCATGGAGCCCACACAACAGTTGAAGACGAAAGAAAGAGACCTGATCGTTCGCCAGAGAAAGCAACCTAATTCGTCCGGGGTTACGTACGTGCCCAAGAAACAGTGGGTGATACCATCGCCATTAATTACTGTAAGTAAATAAGTTGCTTAATTGATAAGTGAAATTTTGGTTTTGGATCACCATTTTAGTTTGTGGCCTTGTGGGTGAGCTAGCATGTACTGGATTGTTGACACGTTGGAGCTGGTCGCTGTCAGGATGGAAAAGAAGTATGCCGGGTAAATTATTACTATCACTTCTACCTAGGATAAACGAAGGATTAACATGGTGGCTGTCATTGTCCTGGGTGGGTCTTGTCTTTGACTAAAACTGCTACTGCTTGTATCCGGATTGATTACTCAGCCTTGCACTCTTCAGCCTTCTCACAAAATTCTAGCTTTAGTCATAAAAAATGGCCTTCTGATCTTGCAGAAAAATGCGACTACTCATCAGTCGTTTATCCTGTAAGCGCAGCAAGCTGAAGG]

[+] EMBL AK121125             [GCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTTCTCCGATCGCGGCGGAATGGACGGCGGCGCGGCCACGAACGCATCTGGAGTCGCCGCGGCGGCAGCGGCGGCGGGGAACGGCGTGCAGGCGGGGGGCGGGGGCGAGAGGGCGGAGGACGCGTCGAAGCAGAACCTGGCGCTGATGATGGCCTCGATCCAGAGGACGCTGGGGCTCCTCCACCAGCTCAACCTCAACGTCTCCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGGAGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCGTCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCTGCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGCATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATACGCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATGGTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTAAGGATTTTTATTTATGCTTTGCTTTAGGTATGATTTGTGAATTAACAACTCAAATTTCCTTGTATCAACTGTTTCTTACCAATAGATCTGTATGTATTCTCGTATTGTGTGCCACATCATTTGTTCAGCTTACCTAATGATTGAAGTAATAACCCTGTAATCTATCATCCTACATGAGCATAAATTATCTGCAGCTCAGCTAGCTCAAGGGAAAAATGGTTGCTTATTAGGTGCTGCATGCTGAGTAGTTGTGTTTACCTTATTTTGGTTTATCCAAAGAGTAGCACCATCTGGACTAGGAATGCCATGCCTCATCTATCAGTCAATAGACTATTATGCAACTGACAATTAATAGTAAATCTGTAAGCTTATATCTTATCATTCGTCTGATCTGATAACCATTTCCTCATTCTGGTCCTACTGGATACTGCTGTGTACTCCATTCATTTGCTAATCCAGTTGGCAGTTGCCCCTAGATTCTTTCTGCAATGTAGTCTATGGTCCTATATAGTACATAGGATAGATTGCCTTCTGGTTTGTTAAACAGAGAAACGGTTGTCTTATGCTGTGTTGGCTGGTCGATTTCCCTTTCGAAGTCAGCTAGTTGAAATTAGGAAATTCATCTGTATACTTGGGGCGCTTCAATGTCTAATCTTTCCTATTTATGATTTTGACTATTATCACCAGTTTATCACATGAATGCAATTAATTCAGGTACTTAAATCGTTTGGTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATGGAATTTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGACTGCATTAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTATATAAGCATATATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGATCGTATGATGTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGATCATTTTCTCATATTTCTTCTTTGATGGCTGTACTACCCTCAGTCTTTGGATTGTTCCAAGCATGGGAGCTTTTTAAATTAACGAGTCACGCCTGCCCAGATAAGTCCCAAAAGCTATGTATCCAAATCATTTAGTCCAAATCATTTAGTCGTTGTGCATCAGTAATCAAGTCAAAGATGCTATTGGTTTCAAACTCCCAGTACAACACGTCCATGGATGAAGATGAGAGTGCAAGACCCTGTTTGTTCCACTGAGTTTCATCTCTAGGAATTCCATACAAATCTTTGTTTTAATTATTACTAGTATTACGTAAATCATGTGTTCCAGATATGTAGTAAATTGATGTACTACCATGCGTGGTGCTCATCTTTTGAATGATCTGCAACTTATCTGGAGTTGACACCTAATCGCATCTAAAGTTGAATATCCAAATTGAAACTGCGTGCTTGGAGTCTTTCAGTCTCTTATTGGAGTGTATCAAGCATCCACTGAGAAAAGCCTCTGTATATTCTAACTCATCCAAGGTAATGTCACACGAGTAAGTGATAAGCAATCCACGTGGACAACGGCTTGATGACAGAACCCTTGCATTCACATCACAGGGTGTACAAGTGGCTACAATTCTGTGACTAGGATTGCAATTTGCTTATAATATGTTGGGCTCATGAGTTGTCACATTTGAGTGGAACCCATATCGGTTAGATGGAAGCAATGCTAACCACCCTCAAGATAACACGACAAGCGCCTGTGATATTCTGGAGCTAGCAAGCTCAACTCAATATTTTTTCCTCTCCATTTTTCTTTTTCAGAGTTTCATACTCTTGGCTGCTTGGCTAGTGCCCATCGAACATAGAATTTGTGTTCAACGATTCTGATCGTCACTGTGTCTGAACAGTGACATGTAATTATGCCATGGAGCCCACACAACAGTTGAAGACGAAAGAAAGAGACCTGATCGTTCGCCAGAGAAAGCAACCTAATTCGTCCGGGGTTACGTACGTGCCCAAGAAACAGTGGGTGATACCATCGCCATTAATTACTGTAAGTAAATAAGTTGCTTAATTGATAAGTGAAATTTTGGTTTTGGATCACCATTTTAGTTTGTGGCCTTGTGGGTGAGCTAGCATGTACTGGATTGTTGACACGTTGGAGCTGGTCGCTGTCAGGATGGAAAAGAAGTATGCCGGGTAAATTATTACTATCACTTCTACCTAGGATAAACGAAGGATTAACATGGTGGCTGTCATTGTCCTGGGTGGGTCTTGTCTTTGACTAAAACTGCTACTGCTTGTATCCGGATTGATTACTCAGCCTTGCACTCTTCAGCCTTCTCACAAAATTCTAGCTTTAGTCATAAAAAATGGCCTTCTGATCTTGCAGAAAAATGCGACTACTCATCAGTCGTTTATCCTGTAAGCGCAGCAAGCTGAAGG]




>consensus_1913#0
GCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTTCTCCGATCGCGGCGGAATGG
ACGGCGGCGCGGCCACGAACGCATCTGGAGTCGCCGCGGCGGCAGCGGCGGCGGGGAACG
GCGTGCAGGCGGGGGGCGGGGGCGAGAGGGCGGAGGACGCGTCGAAGCAGAACCTGGCGC
TGATGATGGCCTCGATCCAGAGGACGCTGGGGCTCCTCCACCAGCTCAACCTCAACGTCT
CCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGG
AGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCG
TCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCT
GCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGC
ATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATAC
GCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATG
GTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTAAGGATTTTTA
TTTATGCTTTGCTTTAGGTATGATTTGTGAATTAACAACTCAAATTTCCTTGTATCAACT
GTTTCTTACCAATAGATCTGTATGTATTCTCGTATTGTGTGCCACATCATTTGTTCAGCT
TACCTAATGATTGAAGTAATAACCCTGTAATCTATCATCCTACATGAGCATAAATTATCT
GCAGCTCAGCTAGCTCAAGGGAAAAATGGTTGCTTATTAGGTGCTGCATGCTGAGTAGTT
GTGTTTACCTTATTTTGGTTTATCCAAAGAGTAGCACCATCTGGACTAGGAATGCCATGC
CTCATCTATCAGTCAATAGACTATTATGCAACTGACAATTAATAGTAAATCTGTAAGCTT
ATATCTTATCATTCGTCTGATCTGATAACCATTTCCTCATTCTGGTCCTACTGGATACTG
CTGTGTACTCCATTCATTTGCTAATCCAGTTGGCAGTTGCCCCTAGATTCTTTCTGCAAT
GTAGTCTATGGTCCTATATAGTACATAGGATAGATTGCCTTCTGGTTTGTTAAACAGAGA
AACGGTTGTCTTATGCTGTGTTGGCTGGTCGATTTCCCTTTCGAAGTCAGCTAGTTGAAA
TTAGGAAATTCATCTGTATACTTGGGGCGCTTCAATGTCTAATCTTTCCTATTTATGATT
TTGACTATTATCACCAGTTTATCACATGAATGCAATTAATTCAGGTACTTAAATCGTTTG
GTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATGGAAT
TTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGACTGCAT
TAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTATATAAGCATAT
ATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGATCGTATGATGT
AGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGATCATTTTCTCATATTT
CTTCTTTGATGGCTGTACTACCCTCAGTCTTTGGATTGTTCCAAGCATGGGAGCTTTTTA
AATTAACGAGTCACGCCTGCCCAGATAAGTCCCAAAAGCTATGTATCCAAATCATTTAGT
CCAAATCATTTAGTCGTTGTGCATCAGTAATCAAGTCAAAGATGCTATTGGTTTCAAACT
CCCAGTACAACACGTCCATGGATGAAGATGAGAGTGCAAGACCCTGTTTGTTCCACTGAG
TTTCATCTCTAGGAATTCCATACAAATCTTTGTTTTAATTATTACTAGTATTACGTAAAT
CATGTGTTCCAGATATGTAGTAAATTGATGTACTACCATGCGTGGTGCTCATCTTTTGAA
TGATCTGCAACTTATCTGGAGTTGACACCTAATCGCATCTAAAGTTGAATATCCAAATTG
AAACTGCGTGCTTGGAGTCTTTCAGTCTCTTATTGGAGTGTATCAAGCATCCACTGAGAA
AAGCCTCTGTATATTCTAACTCATCCAAGGTAATGTCACACGAGTAAGTGATAAGCAATC
CACGTGGACAACGGCTTGATGACAGAACCCTTGCATTCACATCACAGGGTGTACAAGTGG
CTACAATTCTGTGACTAGGATTGCAATTTGCTTATAATATGTTGGGCTCATGAGTTGTCA
CATTTGAGTGGAACCCATATCGGTTAGATGGAAGCAATGCTAACCACCCTCAAGATAACA
CGACAAGCGCCTGTGATATTCTGGAGCTAGCAAGCTCAACTCAATATTTTTTCCTCTCCA
TTTTTCTTTTTCAGAGTTTCATACTCTTGGCTGCTTGGCTAGTGCCCATCGAACATAGAA
TTTGTGTTCAACGATTCTGATCGTCACTGTGTCTGAACAGTGACATGTAATTATGCCATG
GAGCCCACACAACAGTTGAAGACGAAAGAAAGAGACCTGATCGTTCGCCAGAGAAAGCAA
CCTAATTCGTCCGGGGTTACGTACGTGCCCAAGAAACAGTGGGTGATACCATCGCCATTA
ATTACTGTAAGTAAATAAGTTGCTTAATTGATAAGTGAAATTTTGGTTTTGGATCACCAT
TTTAGTTTGTGGCCTTGTGGGTGAGCTAGCATGTACTGGATTGTTGACACGTTGGAGCTG
GTCGCTGTCAGGATGGAAAAGAAGTATGCCGGGTAAATTATTACTATCACTTCTACCTAG
GATAAACGAAGGATTAACATGGTGGCTGTCATTGTCCTGGGTGGGTCTTGTCTTTGACTA
AAACTGCTACTGCTTGTATCCGGATTGATTACTCAGCCTTGCACTCTTCAGCCTTCTCAC
AAAATTCTAGCTTTAGTCATAAAAAATGGCCTTCTGATCTTGCAGAAAAATGCGACTACT
CATCAGTCGTTTATCCTGTAAGCGCAGCAAGCTGAAGG

consensusID : consensus_1913#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 714
fasta sequence 
                              [AACGTCTCCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGGAGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCGTCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCTGCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGCATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATACGCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATGGTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTACTTAAATCGTTTGGTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATGGAATTTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGACTGCATTAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTATATAAGCATATATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGATCGTATGATGTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGA]

[+] EMBL CB663085             [AACGTCTCCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGGAGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCGTCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCTGCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGCATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATACGCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATGGTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTACTTAAATCGTTTGGTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATGGAATTTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGACTGCATTAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTATATAAGCATATATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGATCGTATGATGTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGA]




>consensus_1913#1
AACGTCTCCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTG
GTGGCGGAGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATG
GAGGTCGTCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTC
AACAGCTGCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTG
CGGAAGCATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGG
GAGATACGCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTG
CCTAATGGTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTACTT
AAATCGTTTGGTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCT
ACCATGGAATTTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATAC
AAGACTGCATTAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTAT
ATAAGCATATATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGAT
CGTATGATGTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1913#0      GCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTTCTCCGATCGCGGCGGAATGG 60
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ACGGCGGCGCGGCCACGAACGCATCTGGAGTCGCCGCGGCGGCAGCGGCGGCGGGGAACG 120
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      GCGTGCAGGCGGGGGGCGGGGGCGAGAGGGCGGAGGACGCGTCGAAGCAGAACCTGGCGC 180
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TGATGATGGCCTCGATCCAGAGGACGCTGGGGCTCCTCCACCAGCTCAACCTCAACGTCT 240
consensus_1913#1      -----------------------------------------------------AACGTCT 7
                                                                           *******

consensus_1913#0      CCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGG 300
consensus_1913#1      CCTCCTTCAGCTCCGCCTCCCAGCTACCCCTCCTCCAGCGCCTGAACTCGCTGGTGGCGG 67
                      ************************************************************

consensus_1913#0      AGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCG 360
consensus_1913#1      AGCTCGACACGATGCAGAAGCACGCCGAGGGATGCAACATCCAGGTCCCCATGGAGGTCG 127
                      ************************************************************

consensus_1913#0      TCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCT 420
consensus_1913#1      TCAATTTGATCGATGACGGGAAGAATCCTGACGAGTTCACCCGAGACGTGCTCAACAGCT 187
                      ************************************************************

consensus_1913#0      GCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGC 480
consensus_1913#1      GCATCGCAAAGAACCAGGTCACTAAGGGCAAGACCGATGCTTTCAAGAGCCTGCGGAAGC 247
                      ************************************************************

consensus_1913#0      ATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATAC 540
consensus_1913#1      ATCTTCTTGAGGAGCTGGAGCAAGCTTTTCCTGAGGATGTAGAAGCATACAGGGAGATAC 307
                      ************************************************************

consensus_1913#0      GCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATG 600
consensus_1913#1      GCGCTACTGCTGCTGCTGAATCAAAACAGCTGGCTCAGTCCCAAAGCGCCTTGCCTAATG 367
                      ************************************************************

consensus_1913#0      GTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTAAGGATTTTTA 660
consensus_1913#1      GTGATGTTAAAGTGAAACCGGAGCATTGAGAGGACCCAACTGCAAAGGTACTTAAATCGT 427
                      **************************************************   *  *   

consensus_1913#0      TTTATGCTTTGCTTTAGGTATGATTTGTGAATTAACAACTCAAATTTCCTTGTATCAACT 720
consensus_1913#1      TTGGTGATTTCTCCTAAA-GTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATG 486
                      **  ** ***    **    ***  **   * **  *     *  * *   *   * *  

consensus_1913#0      GTTTCTTACCAATAGATCTGTATGTATTCTCGTATTGTGTGCCACATCATTTGTTCA-GC 779
consensus_1913#1      GAATTT--GCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGA 544
                      *  * *   * ** *     *     **   *    *   *  * ** **   * ** * 

consensus_1913#0      TTACCTAATGATTGAAGTAATAACCCTGTAATCTATCATCCTACATGAGCATAAATTATC 839
consensus_1913#1      CTGCATTAAATTAGAAGTAA--ACCTTG-ATCTTGACATCAGCCTGGAATATTATGTATA 601
                       * * * *   * *******  *** ** *   *  ****   *  **  ** *  *** 

consensus_1913#0      TGCAGCTCAGCTAGCTCAAGGGAAAAATGGTTGCTTATTAGGTGCTGCATGCTGAGTAGT 899
consensus_1913#1      TAAGCATATATGAGATGCAGAGTATCTTTAGGACGTAACAG-TGACTTGTAGCGAGCGAT 660
                      *     *     ** *  ** * *   *     * **  ** **     *   ***   *

consensus_1913#0      TGTGTT-TACCTTATTTTGGTTTATCCAAAGAGTAGCACCATCTGGACTAGGAATGCCAT 958
consensus_1913#1      CGTATGATGTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGA------ 714
                       ** *  *    *   *  ******    * **       *     * * *  *      

consensus_1913#0      GCCTCATCTATCAGTCAATAGACTATTATGCAACTGACAATTAATAGTAAATCTGTAAGC 1018
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TTATATCTTATCATTCGTCTGATCTGATAACCATTTCCTCATTCTGGTCCTACTGGATAC 1078
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TGCTGTGTACTCCATTCATTTGCTAATCCAGTTGGCAGTTGCCCCTAGATTCTTTCTGCA 1138
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ATGTAGTCTATGGTCCTATATAGTACATAGGATAGATTGCCTTCTGGTTTGTTAAACAGA 1198
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      GAAACGGTTGTCTTATGCTGTGTTGGCTGGTCGATTTCCCTTTCGAAGTCAGCTAGTTGA 1258
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AATTAGGAAATTCATCTGTATACTTGGGGCGCTTCAATGTCTAATCTTTCCTATTTATGA 1318
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TTTTGACTATTATCACCAGTTTATCACATGAATGCAATTAATTCAGGTACTTAAATCGTT 1378
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TGGTGATTTCTCCTAAAGTGACGTGGATACTATGATGGTGAGCTACTGAGCTACCATGGA 1438
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ATTTGCTATGGTCTAATGGAACTTAAGGGGACGGAAGATATATTATGAATACAAGACTGC 1498
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ATTAAATTAGAAGTAAACCTTGATCTTGACATCAGCCTGGAATATTATGTATATAAGCAT 1558
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ATATGAGATGCAGAGTATCTTTAGGACGTAACAGTGACTTGTAGCGAGCGATCGTATGAT 1618
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      GTAGTCCATATGTTTATTTTGAAAGATATGTGAGAATAATTTGAGATCATTTTCTCATAT 1678
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TTCTTCTTTGATGGCTGTACTACCCTCAGTCTTTGGATTGTTCCAAGCATGGGAGCTTTT 1738
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TAAATTAACGAGTCACGCCTGCCCAGATAAGTCCCAAAAGCTATGTATCCAAATCATTTA 1798
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      GTCCAAATCATTTAGTCGTTGTGCATCAGTAATCAAGTCAAAGATGCTATTGGTTTCAAA 1858
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      CTCCCAGTACAACACGTCCATGGATGAAGATGAGAGTGCAAGACCCTGTTTGTTCCACTG 1918
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AGTTTCATCTCTAGGAATTCCATACAAATCTTTGTTTTAATTATTACTAGTATTACGTAA 1978
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ATCATGTGTTCCAGATATGTAGTAAATTGATGTACTACCATGCGTGGTGCTCATCTTTTG 2038
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AATGATCTGCAACTTATCTGGAGTTGACACCTAATCGCATCTAAAGTTGAATATCCAAAT 2098
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TGAAACTGCGTGCTTGGAGTCTTTCAGTCTCTTATTGGAGTGTATCAAGCATCCACTGAG 2158
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AAAAGCCTCTGTATATTCTAACTCATCCAAGGTAATGTCACACGAGTAAGTGATAAGCAA 2218
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TCCACGTGGACAACGGCTTGATGACAGAACCCTTGCATTCACATCACAGGGTGTACAAGT 2278
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      GGCTACAATTCTGTGACTAGGATTGCAATTTGCTTATAATATGTTGGGCTCATGAGTTGT 2338
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      CACATTTGAGTGGAACCCATATCGGTTAGATGGAAGCAATGCTAACCACCCTCAAGATAA 2398
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      CACGACAAGCGCCTGTGATATTCTGGAGCTAGCAAGCTCAACTCAATATTTTTTCCTCTC 2458
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      CATTTTTCTTTTTCAGAGTTTCATACTCTTGGCTGCTTGGCTAGTGCCCATCGAACATAG 2518
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AATTTGTGTTCAACGATTCTGATCGTCACTGTGTCTGAACAGTGACATGTAATTATGCCA 2578
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TGGAGCCCACACAACAGTTGAAGACGAAAGAAAGAGACCTGATCGTTCGCCAGAGAAAGC 2638
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AACCTAATTCGTCCGGGGTTACGTACGTGCCCAAGAAACAGTGGGTGATACCATCGCCAT 2698
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TAATTACTGTAAGTAAATAAGTTGCTTAATTGATAAGTGAAATTTTGGTTTTGGATCACC 2758
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ATTTTAGTTTGTGGCCTTGTGGGTGAGCTAGCATGTACTGGATTGTTGACACGTTGGAGC 2818
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TGGTCGCTGTCAGGATGGAAAAGAAGTATGCCGGGTAAATTATTACTATCACTTCTACCT 2878
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      AGGATAAACGAAGGATTAACATGGTGGCTGTCATTGTCCTGGGTGGGTCTTGTCTTTGAC 2938
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      TAAAACTGCTACTGCTTGTATCCGGATTGATTACTCAGCCTTGCACTCTTCAGCCTTCTC 2998
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      ACAAAATTCTAGCTTTAGTCATAAAAAATGGCCTTCTGATCTTGCAGAAAAATGCGACTA 3058
consensus_1913#1      ------------------------------------------------------------
                                                                                  

consensus_1913#0      CTCATCAGTCGTTTATCCTGTAAGCGCAGCAAGCTGAAGG 3098
consensus_1913#1      ----------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)