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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1917 cluster # 1917       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1917#0 length = 813 sequences # 2  

consensusID : consensus_1917#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 813
fasta sequence
                              [AAGATTTCTCCACCTCAAGCACCTTACTGTTTTTCTTCACACAGTCCCTAGGGTCGTTTCCCCAACATATGATTATCTTTCTTTAGCTTATTTTCTTGATGCATCTCCTGCCTTGGAGACTTTCACTTTGAAGGTAAGTAAAGTTTTCACGTGTAAGTAAATTTTAATATGCGGAAATATATATCTATCATATATAGTGGAACTATTTGTTGAAATATTCTCTGCTGGTTCATATGCAGGTATCACAGACTCGCATGGAGCATGACGTGATTTCTGAAGATTCATCACATCTAAGGCAGATGCCAGGACACCATCATGACACCATCAAGAATGTGAAGATCATGGTCGAGCTAACTTGTCATATTCTTGAGAATGCAACATCACTTGAAGGTCTTACACTAGACACAATATTTGATGGAAATAATAATCCTGCAGATAGGCTATCTGTTCACGAAGTTGGTCGTTGTGGCCGCATACATAGCCCTATGGTCATGGAAGCCAAAAACGCGCTCTTGGCTATCGAGAGATACATCGTCGGGAAAGTCCCCTCTACAGTGAAGCTGGATGTTCTAAAACCCTGCAGCTGGTGCCATACAAATTCAAGTGTTGAGTGATACGGATTGTCCAATATTTAATCGTGAGCTGTTGCTTAGGTGTGGCTTTTTCTTGAGCTACTGAATCTACCCGTTG-TTTGAGGTTTG-ATTA-TTTTCATGGGTA-TGTGCTTTGTT--TTAAG-TGGCACAAGTGT-ATTGTCCTGTGATTGTCATTACATGGGCTGGTTCAATTATACTATTATCAAAACCATTCTTTCAAAAA]

[+] EMBL BE039652             [AAGATTTCTCCACCTCAAGCACCTTACTGTTTTTCTTCACACAGTCCCTAGGGTCGTTTCCCCAACATATGATTATCTTTCTTTAGCTTATTTTCTTGATGCATCTCCTGCCTTGGAGACTTTCACTTTGAAGGTAAGTAAAGTTTTCACGTGTAAGTAAATTTTAATATGCGGAAATATATATCTATCATATATAGTGGAACTATTTGTTGAAATATTCTCTGCTGGTTCATATGCAGGTATCACAGACTCGCATGGAGCATGACGTGATTTCTGAAGATTCATCACATCTAAGGCAGATGCCAGGACACCATCATGACACCATCAAGAATGTGAAGATCATGGTCGAGCTAACTTGTCATATTCTTGAGAATGCAACATCACTTGAAGGTCTTACACTAGACACAATATTTGATGGAAATAATAATCCTGCAGATAGGCTATCTGTTCACGAAGTTGGTCGTTGTGGCCGCATACATAGCCCTATGGTCATGGAAGCCAAAAACGCGCTCTTGGCTATCGAGAGATACATCGTCGGGAAAGTCCCCTCTACAGTGAAGCTGGATGTTCTAAAACCCTGCAGCTGGTGCCATACAAATTCAAGTGTTGAGTGATACGGATTGTCCAATATTTAATCGTGAGCTGTTGCTTAGGTGTGGCTTTTTCTTGAGCTACTGAATCTACCCGTTG TTTGAGGTTTG ATTA TTTTCATGGGTA TGTGCTTTGTT  TTAAG TGGCACAAGTGT ATTGTC                                                              ]
[+] EMBL BM421130             [                                                                                                                                                                                                                                                                                                             GCCA GACACCATCATGACACCATCAAGAATGTGAAGATCATGGTCGAGCTAACTTGTCATATTCTTGAGAATGCAACATCACTTGAAGGTCTTACACTAGACAC ATATTTGATGGAAATAATAATCCTGCAGATAGGCTATCTGTTCACGAAGTTGGTCGTTGTGGCCGCATACATAGCCCTATGGTCATGGAAGCCNAAAACGCGCTCTTGGCTATCGAGAGATACATCGTCGGGAAAGTCCCCTCTACAGTGAAGCTGGATGTTCTAAAACCCTGCAGCTGGTGCCATACAAATTCAAGTGTTGAGTGATACGGATTGTCCAATATTTAATCGTGAGCTGTTGCTTAGGTGTGGCTTTTTCTTGAGCTACTGAATCTACCCGTTGTTTTGAGTTCTGTATTATTTTTCATGGGTATTGTGCTTTGTTTCTTAAGTTGTCACAAGTGTCATTGTTCTGTGATTGTCATTACATGGGCTGGTTCAATTATACTATTATCAAAACCATTCTTTCAAAAA]


>consensus_1917#0 AAGATTTCTCCACCTCAAGCACCTTACTGTTTTTCTTCACACAGTCCCTAGGGTCGTTTC CCCAACATATGATTATCTTTCTTTAGCTTATTTTCTTGATGCATCTCCTGCCTTGGAGAC TTTCACTTTGAAGGTAAGTAAAGTTTTCACGTGTAAGTAAATTTTAATATGCGGAAATAT ATATCTATCATATATAGTGGAACTATTTGTTGAAATATTCTCTGCTGGTTCATATGCAGG TATCACAGACTCGCATGGAGCATGACGTGATTTCTGAAGATTCATCACATCTAAGGCAGA TGCCAGGACACCATCATGACACCATCAAGAATGTGAAGATCATGGTCGAGCTAACTTGTC ATATTCTTGAGAATGCAACATCACTTGAAGGTCTTACACTAGACACAATATTTGATGGAA ATAATAATCCTGCAGATAGGCTATCTGTTCACGAAGTTGGTCGTTGTGGCCGCATACATA GCCCTATGGTCATGGAAGCCAAAAACGCGCTCTTGGCTATCGAGAGATACATCGTCGGGA AAGTCCCCTCTACAGTGAAGCTGGATGTTCTAAAACCCTGCAGCTGGTGCCATACAAATT CAAGTGTTGAGTGATACGGATTGTCCAATATTTAATCGTGAGCTGTTGCTTAGGTGTGGC TTTTTCTTGAGCTACTGAATCTACCCGTTGTTTGAGGTTTGATTATTTTCATGGGTATGT GCTTTGTTTTAAGTGGCACAAGTGTATTGTCCTGTGATTGTCATTACATGGGCTGGTTCA ATTATACTATTATCAAAACCATTCTTTCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)