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Oryza sativa
cluster # 1925 cluster # 1925       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1925#0 length = 2080 sequences # 1  
consensus_1925#1 length = 1723 sequences # 1  

consensusID : consensus_1925#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2080
fasta sequence
                              [CCTAATCAGTCAGTTTCCTCATCCTCTTTGCATCCTCCGCGCCCTCGCGCTGATACTTGTAATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAGAGCCCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCAGAGTGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGAGATGGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTCTCCCTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATCACAGCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGTGTATATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGTGAGGGGTCCCAAGCCTTCTTTTCTCTTTGGGAACATAGCAGAGATGAGGAGAATCCAGCAATTGGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCATCAAATTATGTGGCAACTCTTTTCCCTTACTTCCTCCACTGGAGCAGGGTTTATGGTTCCATCTACCTGTATTCCACTGGAAGCATACAAGTTTTAAATGTTACTGATCCAAACATGGTGAAGGAGCTAGCCAACTGCAAATCTTTGGATCTTGGAAAACCTTGCTACTTGCAAAAAGAGCGTGGAGCTCTTCTTGGTATGGGAATTCTGACATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGATTGCACCTGAACTATTCATGGAAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGCAATGTCAATGTTGAACTCATGGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGATTGTGGTTGATGAGTTCTTGAGAACCTTTTCAGCTGATGTCATATCAAGGGCTTGTTTTGGAAGCAGCTTTAGTGAAGGCAAGGAGATTTTCATAAAAATACGACAACTTCAGAAAGCAATGGCAAAACAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAGCAATAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAAGAAATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCAAGGTTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTGCAAAAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGATGCTTCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTGTCAAGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGATCCAGGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGACATGAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGATGGCTCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTTCGCCAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGGGGTCCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACTCCTGCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAGACTGACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGATTCTTGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTTGCAACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTACACCGATTGAAGTGTTACTTATTTGTGGAATGAAACTTTTACTT]

[+] EMBL AK066943             [CCTAATCAGTCAGTTTCCTCATCCTCTTTGCATCCTCCGCGCCCTCGCGCTGATACTTGTAATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAGAGCCCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCAGAGTGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGAGATGGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTCTCCCTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATCACAGCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGTGTATATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGTGAGGGGTCCCAAGCCTTCTTTTCTCTTTGGGAACATAGCAGAGATGAGGAGAATCCAGCAATTGGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCATCAAATTATGTGGCAACTCTTTTCCCTTACTTCCTCCACTGGAGCAGGGTTTATGGTTCCATCTACCTGTATTCCACTGGAAGCATACAAGTTTTAAATGTTACTGATCCAAACATGGTGAAGGAGCTAGCCAACTGCAAATCTTTGGATCTTGGAAAACCTTGCTACTTGCAAAAAGAGCGTGGAGCTCTTCTTGGTATGGGAATTCTGACATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGATTGCACCTGAACTATTCATGGAAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGCAATGTCAATGTTGAACTCATGGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGATTGTGGTTGATGAGTTCTTGAGAACCTTTTCAGCTGATGTCATATCAAGGGCTTGTTTTGGAAGCAGCTTTAGTGAAGGCAAGGAGATTTTCATAAAAATACGACAACTTCAGAAAGCAATGGCAAAACAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAGCAATAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAAGAAATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCAAGGTTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTGCAAAAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGATGCTTCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTGTCAAGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGATCCAGGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGACATGAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGATGGCTCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTTCGCCAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGGGGTCCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACTCCTGCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAGACTGACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGATTCTTGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTTGCAACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTACACCGATTGAAGTGTTACTTATTTGTGGAATGAAACTTTTACTT]


>consensus_1925#0 CCTAATCAGTCAGTTTCCTCATCCTCTTTGCATCCTCCGCGCCCTCGCGCTGATACTTGT AATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAGAGC CCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCAGAG TGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGAGAT GGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTCTCC CTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATCACA GCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGTGTA TATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGTGAG GGGTCCCAAGCCTTCTTTTCTCTTTGGGAACATAGCAGAGATGAGGAGAATCCAGCAATT GGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCATCAAATTATGT GGCAACTCTTTTCCCTTACTTCCTCCACTGGAGCAGGGTTTATGGTTCCATCTACCTGTA TTCCACTGGAAGCATACAAGTTTTAAATGTTACTGATCCAAACATGGTGAAGGAGCTAGC CAACTGCAAATCTTTGGATCTTGGAAAACCTTGCTACTTGCAAAAAGAGCGTGGAGCTCT TCTTGGTATGGGAATTCTGACATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGAT TGCACCTGAACTATTCATGGAAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGC AATGTCAATGTTGAACTCATGGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGAT TGTGGTTGATGAGTTCTTGAGAACCTTTTCAGCTGATGTCATATCAAGGGCTTGTTTTGG AAGCAGCTTTAGTGAAGGCAAGGAGATTTTCATAAAAATACGACAACTTCAGAAAGCAAT GGCAAAACAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAGCAA TAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAAGAA ATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCAAGG TTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTGCAA AAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGATGCT TCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTGTCA AGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGATCCA GGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGACAT GAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGATGGC TCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTTCGC CAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGGGGT CCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACTCCT GCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAGACT GACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGATTCT TGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTTGCA ACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTACACC GATTGAAGTGTTACTTATTTGTGGAATGAAACTTTTACTT



consensusID : consensus_1925#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1723
fasta sequence
                              [CATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGATTGCACCTGAACTATTCATGGAAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGCAATGTCTATGTTGAACTCATGGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGATTGTGGTTGATGAGTTCTTGAGAACCTTTTCAGCTGATGTCATATCAAGGGCTTGCTCCGCGCCCTCGCGCTGATACTTGTAATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAGAGCCCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCAGAGTGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGAGATGGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTCTCCCTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATCACAGCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGTGTATATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGTGAGGGGTCCCAAGCCTTCTTTTCTCTTTGGAAACATACCAGAGATGAGGAGAATCCAGCAATTGGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCCAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAGCAATAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAAGAAATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCAAGGTTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTGCAAAAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGATGCTTCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTGTCAAGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGATCCAGGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGACATGAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGATGGCTCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTTCGCCAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGGGGTCCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACTCCTGCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAGACTGACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGATTCTTGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTTGCAACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTACACCGA]

[+] EMBL AK061990             [CATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGATTGCACCTGAACTATTCATGGAAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGCAATGTCTATGTTGAACTCATGGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGATTGTGGTTGATGAGTTCTTGAGAACCTTTTCAGCTGATGTCATATCAAGGGCTTGCTCCGCGCCCTCGCGCTGATACTTGTAATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAGAGCCCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCAGAGTGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGAGATGGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTCTCCCTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATCACAGCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGTGTATATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGTGAGGGGTCCCAAGCCTTCTTTTCTCTTTGGAAACATACCAGAGATGAGGAGAATCCAGCAATTGGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCCAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAGCAATAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAAGAAATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCAAGGTTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTGCAAAAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGATGCTTCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTGTCAAGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGATCCAGGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGACATGAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGATGGCTCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTTCGCCAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGGGGTCCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACTCCTGCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAGACTGACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGATTCTTGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTTGCAACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTACACCGA]


>consensus_1925#1 CATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGATTGCACCTGAACTATTCATGG AAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGCAATGTCTATGTTGAACTCAT GGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGATTGTGGTTGATGAGTTCTTGA GAACCTTTTCAGCTGATGTCATATCAAGGGCTTGCTCCGCGCCCTCGCGCTGATACTTGT AATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAGAGC CCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCAGAG TGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGAGAT GGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTCTCC CTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATCACA GCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGTGTA TATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGTGAG GGGTCCCAAGCCTTCTTTTCTCTTTGGAAACATACCAGAGATGAGGAGAATCCAGCAATT GGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCCAAAGTATGCTC ATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAGCAATAGAGGGATCTGGAATCTG GATAGTAGCATCCGTACCCTCATTTTAAACATATCAAAGAAATATGAACATGATTCATCG ACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCAAGGTTCTAAGGATGGTCCCTTT GCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTGCAAAAACATCTACTTCGCAGGG CATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGATGCTTCTAGCTTCACACCATGAA TGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTGTCAAGGGAGACCACTAGATTTT GACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGATCCAGGAGACACTCCGATTGTAC CCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGACATGAAACTTGGCGGCATCGAC ATACCGAAAGGAACTAACATCTGGATCCCGATCGCGATGGCTCACCGGGATCCTTCAGTA TGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTTCGCCAACGGCATAGCAGGGGCC TGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGGGGTCCGGACATGTGCCGGCCAG AATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACTCCTGCTGTCCAAGTTTGAATTC AAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAGACTGACCATCGAGCCTGGGAAA GGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGATTCTTGAAGGTTATATAAATGTT TCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTTGCAACAATGCTGCAACTCGAGT GTAAACAGTAGTATATTCTACAGTATGCAATTCTGTACACCGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1925#0      ------------------------------------------------------------
consensus_1925#1      CATCAAATGGTGATCTATGGGTACACCAGAGAAAAGTGATTGCACCTGAACTATTCATGG 60
                                                                                  

consensus_1925#0      ------------------------------------------------------------
consensus_1925#1      AAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGCTGCAATGTCTATGTTGAACTCAT 120
                                                                                  

consensus_1925#0      ------------------------------------------------------------
consensus_1925#1      GGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGAGATTGTGGTTGATGAGTTCTTGA 180
                                                                                  

consensus_1925#0      ---CCTAATCAGTCAGTTTCCTCATCCTCTTTGCATCCTCCGCGCCCTCGCGCTGATACT 57
consensus_1925#1      GAACCTTTTCAGCTGATGTC---ATATCAAGGGCTTGCTCCGCGCCCTCGCGCTGATACT 237
                         ***  ****    * **   **       ** * ***********************

consensus_1925#0      TGTAATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAG 117
consensus_1925#1      TGTAATCAATCAACTCATCAGCATGGTCTTCGCATGGAGCTGCTAGCTGCAGAGTCACAG 297
                      ************************************************************

consensus_1925#0      AGCCCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCA 177
consensus_1925#1      AGCCCAATTGTTGAGCTCGAAATGCCACGTGTTGTATGATCGTTACATGCTAACTGCTCA 357
                      ************************************************************

consensus_1925#0      GAGTGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGA 237
consensus_1925#1      GAGTGAGTGAGGCGCTTCTTTGCGGCTTTATGTCCTTTTCAGCTCCAAGCTTCACATGGA 417
                      ************************************************************

consensus_1925#0      GATGGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTC 297
consensus_1925#1      GATGGATCACCCAGCAAATATGCAGTATACAGTATATGGATATGCTATGAACATGTAGTC 477
                      ************************************************************

consensus_1925#0      TCCCTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATC 357
consensus_1925#1      TCCCTCTTCTCTCACACACACACCCAGATACGTACACACAAAAATGGAGCTATTCTCATC 537
                      ************************************************************

consensus_1925#0      ACAGCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGT 417
consensus_1925#1      ACAGCAATGGCTAGCACTTCTACCTCCGATCATCCTCTGTATCCTTCTGTTCTCCTATGT 597
                      ************************************************************

consensus_1925#0      GTATATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGT 477
consensus_1925#1      GTATATCATTCTATGGCTAAGACCAGAGCGGTTGAGGCAGAAACTGAGGAGCCAAGGAGT 657
                      ************************************************************

consensus_1925#0      GAGGGGTCCCAAGCCTTCTTTTCTCTTTGGGAACATAGCAGAGATGAGGAGAATCCAGCA 537
consensus_1925#1      GAGGGGTCCCAAGCCTTCTTTTCTCTTTGGAAACATACCAGAGATGAGGAGAATCCAGCA 717
                      ****************************** ****** **********************

consensus_1925#0      ATTGGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTCATCAAATTA 597
consensus_1925#1      ATTGGCCAAGTCAGCACATGAACAAGAAGCAGGGAGTACCGACATGTTTTC--------- 768
                      ***************************************************         

consensus_1925#0      TGTGGCAACTCTTTTCCCTTACTTCCTCCACTGGAGCAGGGTTTATGGTTCCATCTACCT 657
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      GTATTCCACTGGAAGCATACAAGTTTTAAATGTTACTGATCCAAACATGGTGAAGGAGCT 717
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      AGCCAACTGCAAATCTTTGGATCTTGGAAAACCTTGCTACTTGCAAAAAGAGCGTGGAGC 777
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      TCTTCTTGGTATGGGAATTCTGACATCAAATGGTGATCTATGGGTACACCAGAGAAAAGT 837
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      GATTGCACCTGAACTATTCATGGAAAGGGTTAAGGGAATGGTGAATTTGATGATGGAGGC 897
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      TGCAATGTCAATGTTGAACTCATGGAAAAATGAAGTTGAGGACAGAGGAGGCAGTGCAGA 957
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      GATTGTGGTTGATGAGTTCTTGAGAACCTTTTCAGCTGATGTCATATCAAGGGCTTGTTT 1017
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      TGGAAGCAGCTTTAGTGAAGGCAAGGAGATTTTCATAAAAATACGACAACTTCAGAAAGC 1077
consensus_1925#1      ------------------------------------------------------------
                                                                                  

consensus_1925#0      AATGGCAAAACAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAG 1137
consensus_1925#1      ----------CAAAGTATGCTCATTGGTGTTCCTGGAAGTAGGTATTTACCAACAAGGAG 818
                                **************************************************

consensus_1925#0      CAATAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAA 1197
consensus_1925#1      CAATAGAGGGATCTGGAATCTGGATAGTAGCATCCGTACCCTCATTTTAAACATATCAAA 878
                      ************************************************************

consensus_1925#0      GAAATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCA 1257
consensus_1925#1      GAAATATGAACATGATTCATCGACCTCAGTAAACAAGGATCTCCTGCACTCCATTATTCA 938
                      ************************************************************

consensus_1925#0      AGGTTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTG 1317
consensus_1925#1      AGGTTCTAAGGATGGTCCCTTTGCTTCATGCACGCCCGAGGATTTCATCGTCGACAACTG 998
                      ************************************************************

consensus_1925#0      CAAAAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGAT 1377
consensus_1925#1      CAAAAACATCTACTTCGCAGGGCATGAGACAACTTCGACCACGGCTGCTTGGTGTTTGAT 1058
                      ************************************************************

consensus_1925#0      GCTTCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTG 1437
consensus_1925#1      GCTTCTAGCTTCACACCATGAATGGCAGTCCCGTGCCCGGGTGGAATCCCTTGACATTTG 1118
                      ************************************************************

consensus_1925#0      TCAAGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGAT 1497
consensus_1925#1      TCAAGGGAGACCACTAGATTTTGACATTCTACGGAAGTTGAAAAAGCTGACAATGGTGAT 1178
                      ************************************************************

consensus_1925#0      CCAGGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGA 1557
consensus_1925#1      CCAGGAGACACTCCGATTGTACCCACCAGCCTCCTTCGTCGCCCGGGAAGCTCTGAATGA 1238
                      ************************************************************

consensus_1925#0      CATGAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGAT 1617
consensus_1925#1      CATGAAACTTGGCGGCATCGACATACCGAAAGGAACTAACATCTGGATCCCGATCGCGAT 1298
                      ************************************************************

consensus_1925#0      GGCTCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTT 1677
consensus_1925#1      GGCTCACCGGGATCCTTCAGTATGGGGTCCTAGTGCCGACAAATTCGATCCGGACAGGTT 1358
                      ************************************************************

consensus_1925#0      CGCCAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGG 1737
consensus_1925#1      CGCCAACGGCATAGCAGGGGCCTGCAAACCCCCTCATATGTACATGCCCTTCGGCGTTGG 1418
                      ************************************************************

consensus_1925#0      GGTCCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACT 1797
consensus_1925#1      GGTCCGGACATGTGCCGGCCAGAATCTAGCCATGGTTGAGCTCAAGGTTGTTCTGTCACT 1478
                      ************************************************************

consensus_1925#0      CCTGCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAG 1857
consensus_1925#1      CCTGCTGTCCAAGTTTGAATTCAAGCTTTCTCCAAACTATGTGCATTGCCCTGCGTTCAG 1538
                      ************************************************************

consensus_1925#0      ACTGACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGAT 1917
consensus_1925#1      ACTGACCATCGAGCCTGGGAAAGGTGTTCCATTAATTTTTAGAGAGCTCTGACTTGAGAT 1598
                      ************************************************************

consensus_1925#0      TCTTGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTT 1977
consensus_1925#1      TCTTGAAGGTTATATAAATGTTTCCCTTTTCCCCTTGTTATATTTGTTTGGTATGTGTTT 1658
                      ************************************************************

consensus_1925#0      GCAACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTAC 2037
consensus_1925#1      GCAACAATGCTGCAACTCGAGTGTAAACAGTAGTATATTCTACAGTATGCAATTCTGTAC 1718
                      ************************************************************

consensus_1925#0      ACCGATTGAAGTGTTACTTATTTGTGGAATGAAACTTTTACTT 2080
consensus_1925#1      ACCGA-------------------------------------- 1723
                      *****                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)