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Oryza sativa
cluster # 1956 cluster # 1956       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1956#0 length = 1500 sequences # 2  
consensusID : consensus_1956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1500
fasta sequence 
                              [TGACACACACACTTGGGGCGCGCGGACGATATGGCCATGGACATGGCGCGGCGGCGGCGCGCGTCGGGCTCGTCGACTTCGCGTGCCTGAGGCCGCCGCCGCGGCTGCGCATCCCGGTGGCCGGGCTGCTCGAGCACTTCAAGCTCATCGGCTGCTTCGACGACGGCAGCGTGGAGTTCATGACCAAGGTGATCGAGGCGAGCGGCATGGGCAACGAGACCTACTTCCCGCCGTCGCTGCACCACATCCCGCCGGCGGCGACGCACGGCGAGGCCATCCGCGAGGCGCACATGCTCTTCTTCCCGGCGCTCGACGACCTCTTCGCCAAGACCGGCGTGCCGCCGTCGTCCGTCGGCGCCGTCGTCGTCAACTGCAGCGGGTTCTGCGCCGCGCCGTCGCTGTCCGCCATCATCGCCAACCGCTACGGCATGCCCAGCGACGTCAGGACCTGCAACCTCTCCGGCATGGGCTGCGCCGCGGGCGCCATCGGCGTCGACGTCGCCGCGGGCCTCCTCCGCGCGCACGCCGCCATGTCCTACGCCGTCGTCGTCAGCGCCGAGATCGTCACCGTCGGCTGGTACAGCGGCAAGGACAAGAGCAAGCTCCTCCTCAACTGCTACTTCCGCACCGGCTGCTCCGCCGCGCTCGTCACCACCAAACGCGGCGGCGGCGGCGTCAAGTACCGGCTCGTCAGCGTGACGCGCACCAACCAGACGGCCAACGACCGAAGCTACCGCTCGGGGTACCGCGACGAGGACGACGAGGGCATCACCGGCTTCACCCTCGGCCACGGCGTCGGGCGCATGGTGAGCGAGCTCCTCCGCGCGCACCTCCTCACCCTCAGCCTGTCCATCCTGCCATGGCGCGAGAAGCTCCGCTACGTCGCCGCGCTGCTCCGCCACCGCCGCCACGACAAGAAGGCCGGCTCCGGCGGCGGCATCCCGATGCCGGACTTCAGGGCGGCGGCGGAGCACTTCTGCCTGCCGTCGTCGGGGAGGCCGATGATCTGGAGGCTGGGGCAGGGGCTGGGGCTGGGCGAGGGGGAGATGGAGGCGGCGCTGATGGCGTTCCACCGGTTCGGGAACCAGTCGGCGGCGTCGCTGTGGTACCAGCTGGCGTACATGGAGGCGAAGGGGAGGGTCCGGCGAGGCGACACGGTGTGGCAGCTCGCCGTCGGCAGCGGCCT-CAAGGCGAACAGTTTGGTGTGGGAGCGCGTCGCCGACGACGACCACTTCGCCACGGAGCGCCACGGGAGGACCACGCTGGGCCCATGGGCCGACTGCATCCACAAGTACCCCGTCACTGAAGGGTAGCACGCATGCATACACATGGAAGATTAGAAATTAAGTTATGGTTTGTTCTAATAATAAGCCACGAGTAAGATTTCATGTGTAATCTCGTGTGTGGTTTCTTATATAATTTAGTGTTTGAATATTTCCACCACTTTACTGGAAATAAAGGCTATATATATATACTTTACCTTAAAAAAAAAAAAAAAAA]

[+] EMBL AK108633             [TGACACACACACTTGGGGCGCGCGGACGATATGGCCATGGACATGGCGCGGCGGCGGCGCGCGTCGGGCTCGTCGACTTCGCGTGCCTGAGGCCGCCGCCGCGGCTGCGCATCCCGGTGGCCGGGCTGCTCGAGCACTTCAAGCTCATCGGCTGCTTCGACGACGGCAGCGTGGAGTTCATGACCAAGGTGATCGAGGCGAGCGGCATGGGCAACGAGACCTACTTCCCGCCGTCGCTGCACCACATCCCGCCGGCGGCGACGCACGGCGAGGCCATCCGCGAGGCGCACATGCTCTTCTTCCCGGCGCTCGACGACCTCTTCGCCAAGACCGGCGTGCCGCCGTCGTCCGTCGGCGCCGTCGTCGTCAACTGCAGCGGGTTCTGCGCCGCGCCGTCGCTGTCCGCCATCATCGCCAACCGCTACGGCATGCCCAGCGACGTCAGGACCTGCAACCTCTCCGGCATGGGCTGCGCCGCGGGCGCCATCGGCGTCGACGTCGCCGCGGGCCTCCTCCGCGCGCACGCCGCCATGTCCTACGCCGTCGTCGTCAGCGCCGAGATCGTCACCGTCGGCTGGTACAGCGGCAAGGACAAGAGCAAGCTCCTCCTCAACTGCTACTTCCGCACCGGCTGCTCCGCCGCGCTCGTCACCACCAAACGCGGCGGCGGCGGCGTCAAGTACCGGCTCGTCAGCGTGACGCGCACCAACCAGACGGCCAACGACCGAAGCTACCGCTCGGGGTACCGCGACGAGGACGACGAGGGCATCACCGGCTTCACCCTCGGCCACGGCGTCGGGCGCATGGTGAGCGAGCTCCTCCGCGCGCACCTCCTCACCCTCAGCCTGTCCATCCTGCCATGGCGCGAGAAGCTCCGCTACGTCGCCGCGCTGCTCCGCCACCGCCGCCACGACAAGAAGGCCGGCTCCGGCGGCGGCATCCCGATGCCGGACTTCAGGGCGGCGGCGGAGCACTTCTGCCTGCCGTCGTCGGGGAGGCCGATGATCTGGAGGCTGGGGCAGGGGCTGGGGCTGGGCGAGGGGGAGATGGAGGCGGCGCTGATGGCGTTCCACCGGTTCGGGAACCAGTCGGCGGCGTCGCTGTGGTACCAGCTGGCGTACATGGAGGCGAAGGGGAGGGTCCGGCGAGGCGACACGGTGTGGCAGCTCGCCGTCGGCAGCGGCCT CAAGGCGAACAGTTTGGTGTGGGAGCGCGTCGCCGACGACGACCACTTCGCCACGGAGCGCCACGGGAGGACCACGCTGGGCCCATGGGCCGACTGCATCCACAAGTACCCCGTCACTGAAGGGTAGCACGCATGCATACACATGGAAGATTAGAAATTAAGTTATGGTTTGTTCTAATAATAAGCCACGAGTAAGATTTCATGTGTAATCTCGTGTGTGGTTTCTTATATAATTTAGTGTTTGAATATTTCCACCACTTTACTGGAAATAAAGGCTATATATATAT                           ]
[+] EMBL AU029540             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGCGCTGATGGCGTTCCACCGGTTCGGGANCCAGTCGGCGGCGTCGCTGTGGTACCAGCTGGCGTACATGGAGGCGAAGGGGAGGGTCCGGCGAGGCGACACGGTGTGGCAGCTCGCCGTCGGCAGCGGCCTACAAGGCGAACAGTTTGGTGTGGGAGCGC TCGCCGACGACGACCACTTCGCCACGGAGCGCCACGGGAGGACCACGCTGGGCCCATGGGCCGACTACATCCACAAGTACCCCGTCACTGAAGGGTAGCACGCATGCATACACATGGAAGATTAGAAATTAAGTTATGGTTTGTTCTAATAATAAGCCCCGAGTAAGATTTCATGTGTAATCTCGTGTGTGGTTTCTTATATAATTTAGTGTTTGAATATTTCCACCACTTTACTGGAAATAAAGGCTATATATATATACTTTACCTTAAAAAAAAAAAAAAAAA]




>consensus_1956#0
TGACACACACACTTGGGGCGCGCGGACGATATGGCCATGGACATGGCGCGGCGGCGGCGC
GCGTCGGGCTCGTCGACTTCGCGTGCCTGAGGCCGCCGCCGCGGCTGCGCATCCCGGTGG
CCGGGCTGCTCGAGCACTTCAAGCTCATCGGCTGCTTCGACGACGGCAGCGTGGAGTTCA
TGACCAAGGTGATCGAGGCGAGCGGCATGGGCAACGAGACCTACTTCCCGCCGTCGCTGC
ACCACATCCCGCCGGCGGCGACGCACGGCGAGGCCATCCGCGAGGCGCACATGCTCTTCT
TCCCGGCGCTCGACGACCTCTTCGCCAAGACCGGCGTGCCGCCGTCGTCCGTCGGCGCCG
TCGTCGTCAACTGCAGCGGGTTCTGCGCCGCGCCGTCGCTGTCCGCCATCATCGCCAACC
GCTACGGCATGCCCAGCGACGTCAGGACCTGCAACCTCTCCGGCATGGGCTGCGCCGCGG
GCGCCATCGGCGTCGACGTCGCCGCGGGCCTCCTCCGCGCGCACGCCGCCATGTCCTACG
CCGTCGTCGTCAGCGCCGAGATCGTCACCGTCGGCTGGTACAGCGGCAAGGACAAGAGCA
AGCTCCTCCTCAACTGCTACTTCCGCACCGGCTGCTCCGCCGCGCTCGTCACCACCAAAC
GCGGCGGCGGCGGCGTCAAGTACCGGCTCGTCAGCGTGACGCGCACCAACCAGACGGCCA
ACGACCGAAGCTACCGCTCGGGGTACCGCGACGAGGACGACGAGGGCATCACCGGCTTCA
CCCTCGGCCACGGCGTCGGGCGCATGGTGAGCGAGCTCCTCCGCGCGCACCTCCTCACCC
TCAGCCTGTCCATCCTGCCATGGCGCGAGAAGCTCCGCTACGTCGCCGCGCTGCTCCGCC
ACCGCCGCCACGACAAGAAGGCCGGCTCCGGCGGCGGCATCCCGATGCCGGACTTCAGGG
CGGCGGCGGAGCACTTCTGCCTGCCGTCGTCGGGGAGGCCGATGATCTGGAGGCTGGGGC
AGGGGCTGGGGCTGGGCGAGGGGGAGATGGAGGCGGCGCTGATGGCGTTCCACCGGTTCG
GGAACCAGTCGGCGGCGTCGCTGTGGTACCAGCTGGCGTACATGGAGGCGAAGGGGAGGG
TCCGGCGAGGCGACACGGTGTGGCAGCTCGCCGTCGGCAGCGGCCTCAAGGCGAACAGTT
TGGTGTGGGAGCGCGTCGCCGACGACGACCACTTCGCCACGGAGCGCCACGGGAGGACCA
CGCTGGGCCCATGGGCCGACTGCATCCACAAGTACCCCGTCACTGAAGGGTAGCACGCAT
GCATACACATGGAAGATTAGAAATTAAGTTATGGTTTGTTCTAATAATAAGCCACGAGTA
AGATTTCATGTGTAATCTCGTGTGTGGTTTCTTATATAATTTAGTGTTTGAATATTTCCA
CCACTTTACTGGAAATAAAGGCTATATATATATACTTTACCTTAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)