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Oryza sativa
cluster # 1997 cluster # 1997       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1997#0 length = 1889 sequences # 1  
consensus_1997#1 length = 1644 sequences # 1  

consensusID : consensus_1997#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1889
fasta sequence
                              [GAAGAGGCTCCCATGGTAAAAATGAATAAGGCAGAGGATGTCTTCAATGTTAAGAGGAAGATCGGAGGGGAGGTTTCAGGTTATACGCACTGTGAGCTGGATCTTTCTTTTCTGCTAGGATTAAGTTGTGGTATTATCCCTTTTGCGAACCACAATTTTGCTCGGAGGGTTCTTTACCAATCTGAAAAACATTCACAGCAAGCTATTGGATACTCTACAACAAATCCGCACATCAGAGTTGATACCCTTTCCCATCAACTTTACTATCCTCAGAGACCCCTTTTCAAAACAGTGATAGCTGACTGCATTGGTAGATCAGAATATACTTTTGGGAGAAAGGATGACTTTGCCAGACCAGAGTATTTCAATGGCCAAAATGCAATAGTGGCAGTGAATGTTCATCAGGGGTTTAATCAAGAAGATTCCCTGGTTATGAATAGGGCTTCTCTTGAGCGGGGTATGTTTAGGACTGAGCACTTCAGGAACTATAAGGCTGAAGTAGAGAACAAAGGTGGGCCAGGTGGCAACAAACGACTAAAAATGAAGGATAAGATTGACTTCGGTAAAATGCAAAGCAAGAGAGGACGTGTTGACAATCTTGACGATGATGGATTACCATATGTCGGTGCAAGTCTTCAGAGTGGTGACATTGTCATTGGAAAGGTCTCAGAATCTGGTGAAGATCATAGTATTAAGCTGAAGCATACTGAAAAGGGTATGGTGCAGAGGGTATTACTTTCAGCTAATGATGAGGGGAAGAACTTTGCAGTTGTTACTCTAAGACAGGTTCGATCACCTTGCCTTGGAGATAAATTTTCCAGCATGCATGGCCAGAAAGGTGTCGTTGGTTTTCTAGAATCTCAGGAGAATTTCCCATTTACTTACCAAGGAATAGTACCAGATATTGTGATAAATCCACATGCATTTCCTACCCGTCAAACTCCAGGCCAGCTTCTTGAAGCTGCTTTGGGGAAAGGAATTGCCCTCGGTGGTACAATGAGATATGCTACACCATTCACAACAGCATCGTTTGATGTGATCACAGACCAATTACACAAGGCTGGATTTTCAAGATGGGGAGCTGAAAGTGTTCTCAATGGCCGGACTGGTGAAAGGATGCACTCATTGATTTTCATGGGTCCTACTTTTTACCAGAGGCTGATACACATGGCAGAAGATAAGGTCAAGTTCAGGAACACGGGGCCAGTGCACCCCCTAACACGGCAACCTGTTGCTGACAGGAAGAGGTTTGGGGGAGTGAAGTTTGGAGAAATGGAGCGTGACTGCCTCCTCGCCCATGGTGCAGCAGCCAACCTCCATGAGCGGCTCTTCATGCTTAGTGACTTCTCGCAGATGCACGTCTGCCAGACGTGCGAACGTGTGGCGAATGTTATCATGAGGCCTGTCCCAGGAGGAAAGAAGATCCGGGGGCCATACTGTGGGTTCTGCCGCTCTTCTGAAAACATAGTAAGGATCAATGTGCCCTACGGCGCAAAGCTGCTCTATCAAGAGCTATTCAGCATGGGGATCTGCCTTAGATTTGAGACGGAAGTCTGCTAGAACTCCACATCTACTATCGACTCACCATGTATATATATCCTCGTTGTCCCTTGGAGATTCTGTTATGGGCATTAGTGTTGTAGCCACATGACTTCTCTTCCGGTTGGACGATGGCATAGCTAGGAGGGGTGAATCTGAAGTCAGGTGAAACCTTTCTTTTGCTATTTATTTGGGTGAAGACTCAATTCCCATCACCTGCCTTTGATGTCCTGTGACCAACCGATGGCATAGTTAGGGATGGGGTGAATCAGAGGTCAACTGAAAACCCTTTTGCTATAGTTCGATGTTTCACCTTGGCACTGTACTATGCATATTTGGATGAAAACTCA]

[+] EMBL AK058580             [GAAGAGGCTCCCATGGTAAAAATGAATAAGGCAGAGGATGTCTTCAATGTTAAGAGGAAGATCGGAGGGGAGGTTTCAGGTTATACGCACTGTGAGCTGGATCTTTCTTTTCTGCTAGGATTAAGTTGTGGTATTATCCCTTTTGCGAACCACAATTTTGCTCGGAGGGTTCTTTACCAATCTGAAAAACATTCACAGCAAGCTATTGGATACTCTACAACAAATCCGCACATCAGAGTTGATACCCTTTCCCATCAACTTTACTATCCTCAGAGACCCCTTTTCAAAACAGTGATAGCTGACTGCATTGGTAGATCAGAATATACTTTTGGGAGAAAGGATGACTTTGCCAGACCAGAGTATTTCAATGGCCAAAATGCAATAGTGGCAGTGAATGTTCATCAGGGGTTTAATCAAGAAGATTCCCTGGTTATGAATAGGGCTTCTCTTGAGCGGGGTATGTTTAGGACTGAGCACTTCAGGAACTATAAGGCTGAAGTAGAGAACAAAGGTGGGCCAGGTGGCAACAAACGACTAAAAATGAAGGATAAGATTGACTTCGGTAAAATGCAAAGCAAGAGAGGACGTGTTGACAATCTTGACGATGATGGATTACCATATGTCGGTGCAAGTCTTCAGAGTGGTGACATTGTCATTGGAAAGGTCTCAGAATCTGGTGAAGATCATAGTATTAAGCTGAAGCATACTGAAAAGGGTATGGTGCAGAGGGTATTACTTTCAGCTAATGATGAGGGGAAGAACTTTGCAGTTGTTACTCTAAGACAGGTTCGATCACCTTGCCTTGGAGATAAATTTTCCAGCATGCATGGCCAGAAAGGTGTCGTTGGTTTTCTAGAATCTCAGGAGAATTTCCCATTTACTTACCAAGGAATAGTACCAGATATTGTGATAAATCCACATGCATTTCCTACCCGTCAAACTCCAGGCCAGCTTCTTGAAGCTGCTTTGGGGAAAGGAATTGCCCTCGGTGGTACAATGAGATATGCTACACCATTCACAACAGCATCGTTTGATGTGATCACAGACCAATTACACAAGGCTGGATTTTCAAGATGGGGAGCTGAAAGTGTTCTCAATGGCCGGACTGGTGAAAGGATGCACTCATTGATTTTCATGGGTCCTACTTTTTACCAGAGGCTGATACACATGGCAGAAGATAAGGTCAAGTTCAGGAACACGGGGCCAGTGCACCCCCTAACACGGCAACCTGTTGCTGACAGGAAGAGGTTTGGGGGAGTGAAGTTTGGAGAAATGGAGCGTGACTGCCTCCTCGCCCATGGTGCAGCAGCCAACCTCCATGAGCGGCTCTTCATGCTTAGTGACTTCTCGCAGATGCACGTCTGCCAGACGTGCGAACGTGTGGCGAATGTTATCATGAGGCCTGTCCCAGGAGGAAAGAAGATCCGGGGGCCATACTGTGGGTTCTGCCGCTCTTCTGAAAACATAGTAAGGATCAATGTGCCCTACGGCGCAAAGCTGCTCTATCAAGAGCTATTCAGCATGGGGATCTGCCTTAGATTTGAGACGGAAGTCTGCTAGAACTCCACATCTACTATCGACTCACCATGTATATATATCCTCGTTGTCCCTTGGAGATTCTGTTATGGGCATTAGTGTTGTAGCCACATGACTTCTCTTCCGGTTGGACGATGGCATAGCTAGGAGGGGTGAATCTGAAGTCAGGTGAAACCTTTCTTTTGCTATTTATTTGGGTGAAGACTCAATTCCCATCACCTGCCTTTGATGTCCTGTGACCAACCGATGGCATAGTTAGGGATGGGGTGAATCAGAGGTCAACTGAAAACCCTTTTGCTATAGTTCGATGTTTCACCTTGGCACTGTACTATGCATATTTGGATGAAAACTCA]


>consensus_1997#0 GAAGAGGCTCCCATGGTAAAAATGAATAAGGCAGAGGATGTCTTCAATGTTAAGAGGAAG ATCGGAGGGGAGGTTTCAGGTTATACGCACTGTGAGCTGGATCTTTCTTTTCTGCTAGGA TTAAGTTGTGGTATTATCCCTTTTGCGAACCACAATTTTGCTCGGAGGGTTCTTTACCAA TCTGAAAAACATTCACAGCAAGCTATTGGATACTCTACAACAAATCCGCACATCAGAGTT GATACCCTTTCCCATCAACTTTACTATCCTCAGAGACCCCTTTTCAAAACAGTGATAGCT GACTGCATTGGTAGATCAGAATATACTTTTGGGAGAAAGGATGACTTTGCCAGACCAGAG TATTTCAATGGCCAAAATGCAATAGTGGCAGTGAATGTTCATCAGGGGTTTAATCAAGAA GATTCCCTGGTTATGAATAGGGCTTCTCTTGAGCGGGGTATGTTTAGGACTGAGCACTTC AGGAACTATAAGGCTGAAGTAGAGAACAAAGGTGGGCCAGGTGGCAACAAACGACTAAAA ATGAAGGATAAGATTGACTTCGGTAAAATGCAAAGCAAGAGAGGACGTGTTGACAATCTT GACGATGATGGATTACCATATGTCGGTGCAAGTCTTCAGAGTGGTGACATTGTCATTGGA AAGGTCTCAGAATCTGGTGAAGATCATAGTATTAAGCTGAAGCATACTGAAAAGGGTATG GTGCAGAGGGTATTACTTTCAGCTAATGATGAGGGGAAGAACTTTGCAGTTGTTACTCTA AGACAGGTTCGATCACCTTGCCTTGGAGATAAATTTTCCAGCATGCATGGCCAGAAAGGT GTCGTTGGTTTTCTAGAATCTCAGGAGAATTTCCCATTTACTTACCAAGGAATAGTACCA GATATTGTGATAAATCCACATGCATTTCCTACCCGTCAAACTCCAGGCCAGCTTCTTGAA GCTGCTTTGGGGAAAGGAATTGCCCTCGGTGGTACAATGAGATATGCTACACCATTCACA ACAGCATCGTTTGATGTGATCACAGACCAATTACACAAGGCTGGATTTTCAAGATGGGGA GCTGAAAGTGTTCTCAATGGCCGGACTGGTGAAAGGATGCACTCATTGATTTTCATGGGT CCTACTTTTTACCAGAGGCTGATACACATGGCAGAAGATAAGGTCAAGTTCAGGAACACG GGGCCAGTGCACCCCCTAACACGGCAACCTGTTGCTGACAGGAAGAGGTTTGGGGGAGTG AAGTTTGGAGAAATGGAGCGTGACTGCCTCCTCGCCCATGGTGCAGCAGCCAACCTCCAT GAGCGGCTCTTCATGCTTAGTGACTTCTCGCAGATGCACGTCTGCCAGACGTGCGAACGT GTGGCGAATGTTATCATGAGGCCTGTCCCAGGAGGAAAGAAGATCCGGGGGCCATACTGT GGGTTCTGCCGCTCTTCTGAAAACATAGTAAGGATCAATGTGCCCTACGGCGCAAAGCTG CTCTATCAAGAGCTATTCAGCATGGGGATCTGCCTTAGATTTGAGACGGAAGTCTGCTAG AACTCCACATCTACTATCGACTCACCATGTATATATATCCTCGTTGTCCCTTGGAGATTC TGTTATGGGCATTAGTGTTGTAGCCACATGACTTCTCTTCCGGTTGGACGATGGCATAGC TAGGAGGGGTGAATCTGAAGTCAGGTGAAACCTTTCTTTTGCTATTTATTTGGGTGAAGA CTCAATTCCCATCACCTGCCTTTGATGTCCTGTGACCAACCGATGGCATAGTTAGGGATG GGGTGAATCAGAGGTCAACTGAAAACCCTTTTGCTATAGTTCGATGTTTCACCTTGGCAC TGTACTATGCATATTTGGATGAAAACTCA



consensusID : consensus_1997#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1644
fasta sequence
                              [CTGAAAAGATATCGCAACAGGCTATTGGCTACTCCACTACGAATCCTCTCTTTAGAGTTGATACACATTCCCATCAGCTCTATTATCCACAGAGACCTCTGTTCAAAACTGTAGCTGCTGATTGTCTTGGTAAGAGAGACTATACATCTGGAAGCAAACATGACTTTGCCAGACCAGAGTATTTCAATGGCCAAAATGCAATAGTCTCAATCAGTGTCCATCAGGGATTTAACCAAGAGGATTCTTTGGTATTGAATAGGGCCTCTTTAGAGCGTGGCATGTTTCGAACACAACATTTTAAGAGCTATAAAGCACTGATAGAAAACAAAGAGATCACCAAACGATTAAAACACAAGGAAAATATCAATTTTGGAAAAACTCCTAGCAAGAAAGGCCTGGTTGACAGTTTAGATATTGATGGCTTACCATATATTGGAGCAAGTCTTCAGAGTAATGACATTATCATTGGAAAGGTCTCAGACTCTGGTGAAGATCATAGCATCAAGCTGCTACATACTGAAAAAGGAATAGTGGAGAAGGTTGTTCTTTCAGCTACTGATGATGGGACAAATTCTGCGTTTGTTACTCTAAGACAGACTCGCTCGCCACGCATTGGAGACAAGTTTGCCAGCATGCATGGCCAGAAAGGAGTCATTGGCTTCTTGGATTCCCAGGAGAACTTCCCTTTTACTCACCAAGGCATAGTTCCTGACATTGTGATCAATCCCCATGGCTTTCCAACTCGTCAGACTCCCGGCCAACTTCTTGAAGCTGCACTAGGCAAAGGAATCGCCCTCGGCGGTGCCACCCGGTATGCGACACCGTTCACAAGTCCATCTGTGGAAGTGATCACAGAGCAGCTGCACAAGGCTGGGTTCTCCAGGTGGGGAGGGGAGAGCGTGATCAACGGCCGCACCGGCGAGCGTGCGGCGTCGCCGGTGTTCACCGGACCGACGTTCTACCAGCGGCTCCACCACATGGCCGAGGACAAGGTCAAGTTCCGGAACACCGGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGAGGACCGCCGCCGGTACGGCGGCGTCAAGTTCGGCGAGATGGAGCGCGACTGCCTCCTCGCCCACGGCGCCGCCGCCAACCTCCACGAGCGCCTCTTCCTCCTCAGCGACGTGTCGCGCCTCCACGTCTGCCGCCGATGCCAGCGCGCCGCCGTCGTCGTGTCGCCCGCCGTCGCCGCCGACGGCGGCGGCGGCCGGAAGGTGAGGGGGCCGTACTGCAGGTTCTGCAGGTCGGCGGAGGAGGTGGTGAGGGTGAGCGTGCCTTATGGCGCCAAGATCCTCTACCAGGAGCTCTTCTCCATGGGCATCTGCCTCAAGTTCGACACCGAGCTCATCTAGAGTAGACTCTCAGCTTTGGACGGGAAACATCATGATTTATTCTTTTAAAAATGGGATTTTTATCATTTTTTAAGAACATTTTTAAGGACATTTTAGTCTGGTGAGGAGAGTTGACAATTTACTCCATTCATTTTATATTATAAGACGCTTTGGATTTGTCGTAATAAGTCTCTTGAATGTCATTAAAACCTGTATTGGGATATTATCCAATTGGGGCAATTGTGTTCTTACCCCTACTTTCATATCTAATTGTGATTTTACC]

[+] EMBL AK106914             [CTGAAAAGATATCGCAACAGGCTATTGGCTACTCCACTACGAATCCTCTCTTTAGAGTTGATACACATTCCCATCAGCTCTATTATCCACAGAGACCTCTGTTCAAAACTGTAGCTGCTGATTGTCTTGGTAAGAGAGACTATACATCTGGAAGCAAACATGACTTTGCCAGACCAGAGTATTTCAATGGCCAAAATGCAATAGTCTCAATCAGTGTCCATCAGGGATTTAACCAAGAGGATTCTTTGGTATTGAATAGGGCCTCTTTAGAGCGTGGCATGTTTCGAACACAACATTTTAAGAGCTATAAAGCACTGATAGAAAACAAAGAGATCACCAAACGATTAAAACACAAGGAAAATATCAATTTTGGAAAAACTCCTAGCAAGAAAGGCCTGGTTGACAGTTTAGATATTGATGGCTTACCATATATTGGAGCAAGTCTTCAGAGTAATGACATTATCATTGGAAAGGTCTCAGACTCTGGTGAAGATCATAGCATCAAGCTGCTACATACTGAAAAAGGAATAGTGGAGAAGGTTGTTCTTTCAGCTACTGATGATGGGACAAATTCTGCGTTTGTTACTCTAAGACAGACTCGCTCGCCACGCATTGGAGACAAGTTTGCCAGCATGCATGGCCAGAAAGGAGTCATTGGCTTCTTGGATTCCCAGGAGAACTTCCCTTTTACTCACCAAGGCATAGTTCCTGACATTGTGATCAATCCCCATGGCTTTCCAACTCGTCAGACTCCCGGCCAACTTCTTGAAGCTGCACTAGGCAAAGGAATCGCCCTCGGCGGTGCCACCCGGTATGCGACACCGTTCACAAGTCCATCTGTGGAAGTGATCACAGAGCAGCTGCACAAGGCTGGGTTCTCCAGGTGGGGAGGGGAGAGCGTGATCAACGGCCGCACCGGCGAGCGTGCGGCGTCGCCGGTGTTCACCGGACCGACGTTCTACCAGCGGCTCCACCACATGGCCGAGGACAAGGTCAAGTTCCGGAACACCGGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGAGGACCGCCGCCGGTACGGCGGCGTCAAGTTCGGCGAGATGGAGCGCGACTGCCTCCTCGCCCACGGCGCCGCCGCCAACCTCCACGAGCGCCTCTTCCTCCTCAGCGACGTGTCGCGCCTCCACGTCTGCCGCCGATGCCAGCGCGCCGCCGTCGTCGTGTCGCCCGCCGTCGCCGCCGACGGCGGCGGCGGCCGGAAGGTGAGGGGGCCGTACTGCAGGTTCTGCAGGTCGGCGGAGGAGGTGGTGAGGGTGAGCGTGCCTTATGGCGCCAAGATCCTCTACCAGGAGCTCTTCTCCATGGGCATCTGCCTCAAGTTCGACACCGAGCTCATCTAGAGTAGACTCTCAGCTTTGGACGGGAAACATCATGATTTATTCTTTTAAAAATGGGATTTTTATCATTTTTTAAGAACATTTTTAAGGACATTTTAGTCTGGTGAGGAGAGTTGACAATTTACTCCATTCATTTTATATTATAAGACGCTTTGGATTTGTCGTAATAAGTCTCTTGAATGTCATTAAAACCTGTATTGGGATATTATCCAATTGGGGCAATTGTGTTCTTACCCCTACTTTCATATCTAATTGTGATTTTACC]


>consensus_1997#1 CTGAAAAGATATCGCAACAGGCTATTGGCTACTCCACTACGAATCCTCTCTTTAGAGTTG ATACACATTCCCATCAGCTCTATTATCCACAGAGACCTCTGTTCAAAACTGTAGCTGCTG ATTGTCTTGGTAAGAGAGACTATACATCTGGAAGCAAACATGACTTTGCCAGACCAGAGT ATTTCAATGGCCAAAATGCAATAGTCTCAATCAGTGTCCATCAGGGATTTAACCAAGAGG ATTCTTTGGTATTGAATAGGGCCTCTTTAGAGCGTGGCATGTTTCGAACACAACATTTTA AGAGCTATAAAGCACTGATAGAAAACAAAGAGATCACCAAACGATTAAAACACAAGGAAA ATATCAATTTTGGAAAAACTCCTAGCAAGAAAGGCCTGGTTGACAGTTTAGATATTGATG GCTTACCATATATTGGAGCAAGTCTTCAGAGTAATGACATTATCATTGGAAAGGTCTCAG ACTCTGGTGAAGATCATAGCATCAAGCTGCTACATACTGAAAAAGGAATAGTGGAGAAGG TTGTTCTTTCAGCTACTGATGATGGGACAAATTCTGCGTTTGTTACTCTAAGACAGACTC GCTCGCCACGCATTGGAGACAAGTTTGCCAGCATGCATGGCCAGAAAGGAGTCATTGGCT TCTTGGATTCCCAGGAGAACTTCCCTTTTACTCACCAAGGCATAGTTCCTGACATTGTGA TCAATCCCCATGGCTTTCCAACTCGTCAGACTCCCGGCCAACTTCTTGAAGCTGCACTAG GCAAAGGAATCGCCCTCGGCGGTGCCACCCGGTATGCGACACCGTTCACAAGTCCATCTG TGGAAGTGATCACAGAGCAGCTGCACAAGGCTGGGTTCTCCAGGTGGGGAGGGGAGAGCG TGATCAACGGCCGCACCGGCGAGCGTGCGGCGTCGCCGGTGTTCACCGGACCGACGTTCT ACCAGCGGCTCCACCACATGGCCGAGGACAAGGTCAAGTTCCGGAACACCGGCCCGGTGC ACCCGCTGACGCGGCAGCCGGTGGAGGACCGCCGCCGGTACGGCGGCGTCAAGTTCGGCG AGATGGAGCGCGACTGCCTCCTCGCCCACGGCGCCGCCGCCAACCTCCACGAGCGCCTCT TCCTCCTCAGCGACGTGTCGCGCCTCCACGTCTGCCGCCGATGCCAGCGCGCCGCCGTCG TCGTGTCGCCCGCCGTCGCCGCCGACGGCGGCGGCGGCCGGAAGGTGAGGGGGCCGTACT GCAGGTTCTGCAGGTCGGCGGAGGAGGTGGTGAGGGTGAGCGTGCCTTATGGCGCCAAGA TCCTCTACCAGGAGCTCTTCTCCATGGGCATCTGCCTCAAGTTCGACACCGAGCTCATCT AGAGTAGACTCTCAGCTTTGGACGGGAAACATCATGATTTATTCTTTTAAAAATGGGATT TTTATCATTTTTTAAGAACATTTTTAAGGACATTTTAGTCTGGTGAGGAGAGTTGACAAT TTACTCCATTCATTTTATATTATAAGACGCTTTGGATTTGTCGTAATAAGTCTCTTGAAT GTCATTAAAACCTGTATTGGGATATTATCCAATTGGGGCAATTGTGTTCTTACCCCTACT TTCATATCTAATTGTGATTTTACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1997#0      GAAGAGGCTCCCATGGTAAAAATGAATAAGGCAGAGGATGTCTTCAATGTTAAGAGGAAG 60
consensus_1997#1      ------------------------------------------------------------
                                                                                  

consensus_1997#0      ATCGGAGGGGAGGTTTCAGGTTATACGCACTGTGAGCTGGATCTTTCTTTTCTGCTAGGA 120
consensus_1997#1      ------------------------------------------------------------
                                                                                  

consensus_1997#0      TTAAGTTGTGGTATTATCCCTTTTGCGAACCACAATTTTGCTCGGAGGGTTCTTTACCAA 180
consensus_1997#1      ------------------------------------------------------------
                                                                                  

consensus_1997#0      TCTGAAAAACATTCACAGCAAGCTATTGGATACTCTACAACAAATCCGCACATCAGAGTT 240
consensus_1997#1      -CTGAAAAGATATCGCAACAGGCTATTGGCTACTCCACTACGAATCCTCTCTTTAGAGTT 59
                       *******    ** ** ** ******** ***** ** ** ***** * * * ******

consensus_1997#0      GATACCCTTTCCCATCAACTTTACTATCCTCAGAGACCCCTTTTCAAAACAGTGATAGCT 300
consensus_1997#1      GATACACATTCCCATCAGCTCTATTATCCACAGAGACCTCTGTTCAAAACTGTAGCTGCT 119
                      ***** * ********* ** ** ***** ******** ** ******** **    ***

consensus_1997#0      GACTGCATTGGTAGATCAGAATATACTTTTGGGAGAAAGGATGACTTTGCCAGACCAGAG 360
consensus_1997#1      GATTGTCTTGGTAAGAGAGACTATACATCTGGAAGCAAACATGACTTTGCCAGACCAGAG 179
                      ** **  ******    *** ***** * *** ** **  ********************

consensus_1997#0      TATTTCAATGGCCAAAATGCAATAGTGGCAGTGAATGTTCATCAGGGGTTTAATCAAGAA 420
consensus_1997#1      TATTTCAATGGCCAAAATGCAATAGTCTCAATCAGTGTCCATCAGGGATTTAACCAAGAG 239
                      **************************  ** * * *** ******** ***** ***** 

consensus_1997#0      GATTCCCTGGTTATGAATAGGGCTTCTCTTGAGCGGGGTATGTTTAGGACTGAGCACTTC 480
consensus_1997#1      GATTCTTTGGTATTGAATAGGGCCTCTTTAGAGCGTGGCATGTTTCGAACACAACATTTT 299
                      *****  ****  ********** *** * ***** ** ****** * **  * ** ** 

consensus_1997#0      AGGAACTATAAGGCTGAAGTAGAGAACAAAGGTGGGCCAGGTGGCAACAAACGACTAAAA 540
consensus_1997#1      AAGAGCTATAAAGCACTGATAGAAAACAAAG-------AGAT--CACCAAACGATTAAAA 350
                      * ** ****** **     **** *******       ** *  ** ******* *****

consensus_1997#0      ATGAAGGATAAGATTGACTTCGGTAAAATGCAAAGCAAGAGAGGACGTGTTGACAATCTT 600
consensus_1997#1      CACAAGGAAAATATCAATTTTGGAAAAACTCCTAGCAAGAAAGGCCTGGTTGACAGTTTA 410
                         ***** ** **  * ** ** ****  *  ******* *** *  ******* * * 

consensus_1997#0      GACGATGATGGATTACCATATGTCGGTGCAAGTCTTCAGAGTGGTGACATTGTCATTGGA 660
consensus_1997#1      GATATTGATGGCTTACCATATATTGGAGCAAGTCTTCAGAGTAATGACATTATCATTGGA 470
                      **   ****** ********* * ** ***************  ******* ********

consensus_1997#0      AAGGTCTCAGAATCTGGTGAAGATCATAGTATTAAGCTGAAGCATACTGAAAAGGGTATG 720
consensus_1997#1      AAGGTCTCAGACTCTGGTGAAGATCATAGCATCAAGCTGCTACATACTGAAAAAGGAATA 530
                      *********** ***************** ** ******   *********** ** ** 

consensus_1997#0      GTGCAGAGGGTATTACTTTCAGCTAATGATGAGGGGAAGAACTTTGCAGTTGTTACTCTA 780
consensus_1997#1      GTGGAGAAGGTTGTTCTTTCAGCTACTGATGATGGGACAAATTCTGCGTTTGTTACTCTA 590
                      *** *** ***  * ********** ****** ****  ** * ***  ***********

consensus_1997#0      AGACAGGTTCGATCACCTTGCCTTGGAGATAAATTTTCCAGCATGCATGGCCAGAAAGGT 840
consensus_1997#1      AGACAGACTCGCTCGCCACGCATTGGAGACAAGTTTGCCAGCATGCATGGCCAGAAAGGA 650
                      ******  *** ** **  ** ******* ** *** ********************** 

consensus_1997#0      GTCGTTGGTTTTCTAGAATCTCAGGAGAATTTCCCATTTACTTACCAAGGAATAGTACCA 900
consensus_1997#1      GTCATTGGCTTCTTGGATTCCCAGGAGAACTTCCCTTTTACTCACCAAGGCATAGTTCCT 710
                      *** **** **  * ** ** ******** ***** ****** ******* ***** ** 

consensus_1997#0      GATATTGTGATAAATCCACATGCATTTCCTACCCGTCAAACTCCAGGCCAGCTTCTTGAA 960
consensus_1997#1      GACATTGTGATCAATCCCCATGGCTTTCCAACTCGTCAGACTCCCGGCCAACTTCTTGAA 770
                      ** ******** ***** ****  ***** ** ***** ***** ***** *********

consensus_1997#0      GCTGCTTTGGGGAAAGGAATTGCCCTCGGTGGTACAATGAGATATGCTACACCATTCACA 1020
consensus_1997#1      GCTGCACTAGGCAAAGGAATCGCCCTCGGCGGTGCCACCCGGTATGCGACACCGTTCACA 830
                      *****  * ** ******** ******** *** * *   * ***** ***** ******

consensus_1997#0      ACAGCATCGTTTGATGTGATCACAGACCAATTACACAAGGCTGGATTTTCAAGATGGGGA 1080
consensus_1997#1      AGTCCATCTGTGGAAGTGATCACAGAGCAGCTGCACAAGGCTGGGTTCTCCAGGTGGGGA 890
                      *   ****  * ** *********** **  * *********** ** ** ** ******

consensus_1997#0      GCTGAAAGTGTTCTCAATGGCCGGACTGGTGAAAGGATGCACTCATTGATTTTCATGGGT 1140
consensus_1997#1      GGGGAGAGCGTGATCAACGGCCGCACCGGCGAGCGTGCGGCGTCGCCGGTGTTCACCGGA 950
                      *  ** ** **  **** ***** ** ** **  *   *   **   * * ****  ** 

consensus_1997#0      CCTACTTTTTACCAGAGGCTGATACACATGGCAGAAGATAAGGTCAAGTTCAGGAACACG 1200
consensus_1997#1      CCGACGTTCTACCAGCGGCTCCACCACATGGCCGAGGACAAGGTCAAGTTCCGGAACACC 1010
                      ** ** ** ****** ****    ******** ** ** ************ ******* 

consensus_1997#0      GGGCCAGTGCACCCCCTAACACGGCAACCTGTTGCTGACAGGAAGAGGTTTGGGGGAGTG 1260
consensus_1997#1      GGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGAGGACCGCCGCCGGTACGGCGGCGTC 1070
                      ** ** ******** ** ** ***** ** ** *  *** *     ***  ** ** ** 

consensus_1997#0      AAGTTTGGAGAAATGGAGCGTGACTGCCTCCTCGCCCATGGTGCAGCAGCCAACCTCCAT 1320
consensus_1997#1      AAGTTCGGCGAGATGGAGCGCGACTGCCTCCTCGCCCACGGCGCCGCCGCCAACCTCCAC 1130
                      ***** ** ** ******** ***************** ** ** ** *********** 

consensus_1997#0      GAGCGGCTCTTCATGCTTAGTGACTTCTCGCAGATGCACGTCTGCCAGACGTGCGAACGT 1380
consensus_1997#1      GAGCGCCTCTTCCTCCTCAGCGACGTGTCGCGCCTCCACGTCTGCCGCCGATGCCAGCGC 1190
                      ***** ****** * ** ** *** * ****   * **********     *** * ** 

consensus_1997#0      GTGGCGAATGTTATCATGAGGCCTGTCCCAG------------GAGGAAAGAAGATCCGG 1428
consensus_1997#1      GCCGCCGTCGTCGTGTCGCCCGCCGTCGCCGCCGACGGCGGCGGCGGCCGGAAGGTGAGG 1250
                      *  **    **  *   *    * *** * *            * **   **** *  **

consensus_1997#0      GGGCCATACTGTGGGTTCTGCCGCTCTTCTGAAAACATAGTAAGGATCAATGTGCCCTAC 1488
consensus_1997#1      GGGCCGTACTGCAGGTTCTGCAGGTCGGCGGAGGAGGTGGTGAGGGTGAGCGTGCCTTAT 1310
                      ***** *****  ******** * **  * **  *  * ** *** * *  ***** ** 

consensus_1997#0      GGCGCAAAGCTGCTCTATCAAGAGCTATTCAGCATGGGGATCTGCCTTAGATTTGAGACG 1548
consensus_1997#1      GGCGCCAAGATCCTCTACCAGGAGCTCTTCTCCATGGGCATCTGCCTCAAGTTCGACACC 1370
                      ***** *** * ***** ** ***** ***  ****** ******** *  ** ** ** 

consensus_1997#0      GAAGTCTGCTAGAACTCCACATCTACTATCGACTCACCATGTATATATATCCTCGTTGTC 1608
consensus_1997#1      GAGCTCATCTAGAG-------TAGACTCTCAGCTT----TGGACGGGAAACATCATGATT 1419
                      **  **  *****        *  *** **  **     ** *     * * ** *  * 

consensus_1997#0      CCTTGGAGATTCTGTTATGGGCATTAGTGTTGTAGCCACATGACTTCTCTTCCGGTTGGA 1668
consensus_1997#1      T-------ATTCTTTTAAAAATGGGATTTTTATCATTTTTTAAGAACATTTTTAAGGACA 1472
                              ***** ***        * * ** *       * *   *  **        *

consensus_1997#0      CGATGGCATAGCTAGGAGGGGTGAATCTGAAGTCAGGTGAAACCTTTCTTTTGCTATT-T 1727
consensus_1997#1      TTTTAGTCTGGTGAGGAGAGTTGA---------CAATTTACTCCATTCATTTTATATTAT 1523
                         * *  * *  ***** * ***         **  * *  ** *** ***  **** *

consensus_1997#0      ATTTGGGTGAAGACTCAATTCCCATCACCTGCCTTTGATGTCCTGTGACCAACCGATGGC 1787
consensus_1997#1      AAGACGCTTTGGATTTG--TCGTAATAAGTCTCTTGAATGTCATTAAAACCTGTATTGGG 1581
                      *    * *   ** *    **  *  *  *  ***  ***** *   * *      *** 

consensus_1997#0      ATAGTTAGGGATGGGGTGAATCAGAGGTCAACTGAAAACCCTTTTGCTATAGTTCGATGT 1847
consensus_1997#1      ATATTATCCAATTGGGGCAATTGTGTTCTTACCCCTA---CTTTCATATCTAATTGTGAT 1638
                      *** *     ** ***  ***         **    *   ****         * *   *

consensus_1997#0      TTCACCTTGGCACTGTACTATGCATATTTGGATGAAAACTCA 1889
consensus_1997#1      TTTACC------------------------------------ 1644
                      ** ***                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)