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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2048 cluster # 2048       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2048#0 length = 663 sequences # 2  

consensusID : consensus_2048#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 663
fasta sequence
                              [TTTTTTTAGTACTCCAATATAAGAAAACAATCTAGTGAAAAATGCAAGTTTATTGTTTTGATCTAAGATAACATTTCTTCATAAATGTAATTTGCACATACTGACATAAAAACCATACATGCATTCTTTTCAGAGTACGCGGGAGGTGGCCATGCATCGACCTCCGGGGATGTATATAGTTTTGGAATAGTTCTGCTGGAGATGTTGGCGGGCAAAAGGCCAACGGATGCTCTATTCAAGGATGGACTCGACATCGTCAACTTTGTGGAGAGAAACTTCCCACACCAAATATTTGAAGTTCTTGATCCTTCTATCATTGAAGAACTCAAGGAGAAACCTCAAGGAAGTATGGAAGTAACTGAAAATGCAGTCAACCAATGTGTGGTGTCTCTTCTGCAGGTAGCGCTTGCTTGTACGCGCCCACTTGCTTAGAGGGAACGGCCTTCCGAACCTTCGACGACGACCGCGAACCACACTTCAGGAACCTTCGGAACGACGGGAGCTAAGCGAAGCACACAAGCAAAGCTACAAACCGGCGAGAAGGCGGCGGAGAGCGCGGACGTCGGATGGGAAGCGGTCACCGTCGCCGTCGACGCCGGTGCGCCACCGCGCCGTCTCCTCGCCGTCGCCTCTCGAGTCGCCAGCCGCACACCGTCGCCTCTT]

[+] EMBL CF333288             [TTTTTTTAGTACTCCAATATAAGAAAACAATCTAGTGAAAAATGCAAGTTTATTGTTTTGATCTAAGATAACATTTCTTCATAAATGTAATTTGCACATACTGACATAAAAACCATACATGCATTCTTTTCAGAGTACGCGGGAGGTGGCCATGCATCGACCTCCGGGGATGTATATAGTTTTGGAATAGTTCTGCTGGAGATGTTGGCGGGCAAAAGGCCAACGGATGCTCTATTCAAGGATGGACTCGACATCGTCAACTTTGTGGAGAGAAACTTCCCACACCAAATATTTGAAGTTCTTGATCCTTCTATCATTGAAGAACTCAAGGAGAAACCTCAAGGAAGTATGGAAGTAACTGAAAATGCAGTCAACCAATGTGTGGTGTCTCTTCTGCAGGTAGCGCTTGCTTGTACGCGCCCACTTGCTTAGAGGGAACGGCCTTCCGAACCTTCGACGACGACCGCGAACCACACTTCAGGAACCTTCGGAACGACGGGAGCTAAGCGAAGCACACAAGCAAAGCTA                                                                                                                                       ]
[-] EMBL CF333287             [                                                                                                                                                                                    TTTGGAATAGTTCTGCTGGAGATGTTGGCGGGCAAAAGGCCAACGGATGCTCTATTCAAGGATGGACTCGACATCGTCAACTNTGTGGAGAGAAACTTCCCACACCAAATATTTGAAGTTCTTGATCCTTCTATCATTGAAGAACTCAAGGAGAAACCTCAAGGAAGTATGGAAGTAACTGAAAATGCAGTCAACCAATGTGTGGTGTCTCTTCTGCAGGTAGCGCTTGCTTGTACGCGCCCACTTGCTTAGAGGGAACGGCCTTCCGAACCTTCGACGACGACCGCGAACCACACTTCAGGAACCTTCGGAACGACGGGAGCTAAGCGAAGCACACAAGCAAAGCTACAAACCGGCGAGAAGGCGGCGGAGAGCGCGGACGTCGGATGGGAAGCGGTCACCGTCGCCGTCGACGCCGGTGCGCCACCGCGCCGTCTCCTCGCCGTCGCCTCTCGAGTCGCCAGCCGCACACCGTCGCCTCTT]


>consensus_2048#0 TTTTTTTAGTACTCCAATATAAGAAAACAATCTAGTGAAAAATGCAAGTTTATTGTTTTG ATCTAAGATAACATTTCTTCATAAATGTAATTTGCACATACTGACATAAAAACCATACAT GCATTCTTTTCAGAGTACGCGGGAGGTGGCCATGCATCGACCTCCGGGGATGTATATAGT TTTGGAATAGTTCTGCTGGAGATGTTGGCGGGCAAAAGGCCAACGGATGCTCTATTCAAG GATGGACTCGACATCGTCAACTTTGTGGAGAGAAACTTCCCACACCAAATATTTGAAGTT CTTGATCCTTCTATCATTGAAGAACTCAAGGAGAAACCTCAAGGAAGTATGGAAGTAACT GAAAATGCAGTCAACCAATGTGTGGTGTCTCTTCTGCAGGTAGCGCTTGCTTGTACGCGC CCACTTGCTTAGAGGGAACGGCCTTCCGAACCTTCGACGACGACCGCGAACCACACTTCA GGAACCTTCGGAACGACGGGAGCTAAGCGAAGCACACAAGCAAAGCTACAAACCGGCGAG AAGGCGGCGGAGAGCGCGGACGTCGGATGGGAAGCGGTCACCGTCGCCGTCGACGCCGGT GCGCCACCGCGCCGTCTCCTCGCCGTCGCCTCTCGAGTCGCCAGCCGCACACCGTCGCCT CTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)