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Oryza sativa
cluster # 2053 cluster # 2053       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2053#0 length = 2095 sequences # 2  

consensusID : consensus_2053#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2095
fasta sequence
                              [AGTGTACTAGGTAGACACACTAGCTAGCTAGAGTGATCCAGCTAGCATGGAGGCCTCAGCCATGGAGGAGGCCCTCTCGAAGAAGACGACGAGCAAGGGAGGCCTCAGGACCATACCATTCATCATCTCGAACGAGGTGTTCGAGAAGGTGGCCACGTTCGGGCTGCACGCCAACATGATCCTCTACCTCACCGAGAGGTACCACATGACGGCGGCCACCGGCACCGTCGTGCTCTACTTCTGGAACGCGCTCTCCAACTTCCTCCCCATCTTCGGCGCCGTCCTCTCCGACTCCTGCCTCGGCCGCTTCCGCGTCATCGCCCTCGGCTCCGTCGTCAGCCTCGCCGGGATGTGCCTGCTGTGGCTGACGGCGATACTGCCGGCGGACAGGAGGACGCCGGAGTGCGAGGCGAGGCGGGATGACTGTCAGCTGGTGCCGTGGCAGCTGCCGCTGCTGTTCGCGTCGTTCGTTCTCATGTCGGTTGGGTCGGGTGGCATCCGGCCGTGCGCGCTGGCGTTCGGGGCGGACCAGCTGGACCGGCGCGACAACAGCGCCCGGAACGTGCGTACGCTGCAGACCTTCTTCAACTGGTACTACACCGTGCTGGGCCTCTCCATCGTGCTCGCCTCCACCGTCATCGTGTACATCCAGCAGGCCAAGGGGTGGGTCATCGGCTTCGCCGTGCCCGTCGTGCTCATGCTCACCGCGCTCACGCTGCTCCTCCTCGGCTCGCCCTTCTACCTCAAGGCGGAGGCCGACAGGAGCGTGCTCGTCGGCCTCGTGCAGGTGCTCGTCGCCAGCTACAGGAAGAGGAGGGGTCCCTTGCCGCCGGAGACGGCCGACGCGTCGCGCTTCCACAACCGGGCCGGGTACAAGCCGAGGACTCCGTCGAACAGGTTGAGGTGGTTGAACCGTGCGTGCGCGCTGGGGGACAACCCGGACAAGGAGGTGAACCCCGACGACGGCTCGGCGCGCGACCCGTGGACGCTGTGCACGGTGCAGCAGGTGGAGGACGTCAAGGCCGCCGTCCGCGTGCTGCCGATATGGTC-GACGGGGTTCATG-CCCGGCGTGATCATCGGCCAGCAGATGTTCCCCGTGCTGCAGGCGAAGACGATGGAGCGGCGGGTGGGCGGGCTGGA-GATCCCCGCGGCGTCGTTCGGCGTCTTCAGCATCCTCACGCTCACCGTCTGGGTGGCCGTCTACGACCGCGCGCTCGTCCGCCCGCTGTCGCGGCTCACCGGCCACGCGCGCGGCGTCACCCTGCGGCAGCGGATGGGCATCGGCCTGGCGCTCTTCGCCGTGGCCATGGCCGTGGCCGCGCGCACCGAGGCCGCCCGCCGCGCCGAGGCGCTGGCCGAGGGTCTCCGCGACTACGGCCCGCAGTCGGGCCGCGCCGTGCGCATGTCCGCCATGCGGCTGGTGCCGCAGCACTGCATCACGGGACTCGCCGAGGCGCTGAACCTGATCGGGCAGATCGAGTTCTACTACTCCGAGTTCCCCAAGACCATGTCCAGCATCGGCGTCTCGCTGCTGGCGCTCGGCATGGGGTTCGGCAGCGTGGCCGGGAGCGCCATCGTCGGGGCCATCAACGCCGGCACCAGGAGCGGCGGCGGCCGCGACAGCTGGCTCTCCAGCAACCTCAACAGGGGGCACTACGACTACTACTACCTCGTCCTCGCCGCGCTGTGCGTTGCCAACCTCGCCTACTTCGTGTGGTGCGGATGGGCGTACGGCGAGGAGGGCCAGAACCGGGTGACCGCGGAGGAGGAAGCGGTGGAAGACACCAAGACCAAGGAAGAACAGCAGCAGAAACTGCAAAACCTTTTTAGTGAGGCAGGCTGCTGCTGTGTCTGCTTCAGCTTTCTACTTCTCTAGTTCTCTCTTGTGAAAATTGTAGTAATATTTACATGTATATGTTGGTGCAAAAATGGATGGTTCGACCTCGAATCCTATCAGCCCTCCGGATCCAAAGATCCTACAGGGCACAGGCTGCTACCTGCAACGTTAAAATGCTAGTAGTAGCAGCAGTTTTTTTTTTTCTGTTACTTGGATGGGTTGCATATAAGTAGTGATAAAAACGGTGACAGAAATTTT]

[+] EMBL AK069522             [AGTGTACTAGGTAGACACACTAGCTAGCTAGAGTGATCCAGCTAGCATGGAGGCCTCAGCCATGGAGGAGGCCCTCTCGAAGAAGACGACGAGCAAGGGAGGCCTCAGGACCATACCATTCATCATCTCGAACGAGGTGTTCGAGAAGGTGGCCACGTTCGGGCTGCACGCCAACATGATCCTCTACCTCACCGAGAGGTACCACATGACGGCGGCCACCGGCACCGTCGTGCTCTACTTCTGGAACGCGCTCTCCAACTTCCTCCCCATCTTCGGCGCCGTCCTCTCCGACTCCTGCCTCGGCCGCTTCCGCGTCATCGCCCTCGGCTCCGTCGTCAGCCTCGCCGGGATGTGCCTGCTGTGGCTGACGGCGATACTGCCGGCGGACAGGAGGACGCCGGAGTGCGAGGCGAGGCGGGATGACTGTCAGCTGGTGCCGTGGCAGCTGCCGCTGCTGTTCGCGTCGTTCGTTCTCATGTCGGTTGGGTCGGGTGGCATCCGGCCGTGCGCGCTGGCGTTCGGGGCGGACCAGCTGGACCGGCGCGACAACAGCGCCCGGAACGTGCGTACGCTGCAGACCTTCTTCAACTGGTACTACACCGTGCTGGGCCTCTCCATCGTGCTCGCCTCCACCGTCATCGTGTACATCCAGCAGGCCAAGGGGTGGGTCATCGGCTTCGCCGTGCCCGTCGTGCTCATGCTCACCGCGCTCACGCTGCTCCTCCTCGGCTCGCCCTTCTACCTCAAGGCGGAGGCCGACAGGAGCGTGCTCGTCGGCCTCGTGCAGGTGCTCGTCGCCAGCTACAGGAAGAGGAGGGGTCCCTTGCCGCCGGAGACGGCCGACGCGTCGCGCTTCCACAACCGGGCCGGGTACAAGCCGAGGACTCCGTCGAACAGGTTGAGGTGGTTGAACCGTGCGTGCGCGCTGGGGGACAACCCGGACAAGGAGGTGAACCCCGACGACGGCTCGGCGCGCGACCCGTGGACGCTGTGCACGGTGCAGCAGGTGGAGGACGTCAAGGCCGCCGTCCGCGTGCTGCCGATATGGTC GACGGGGTTCATG CCCGGCGTGATCATCGGCCAGCAGATGTTCCCCGTGCTGCAGGCGAAGACGATGGAGCGGCGGGTGGGCGGGCTGGA GATCCCCGCGGCGTCGTTCGGCGTCTTCAGCATCCTCACGCTCACCGTCTGGGTGGCCGTCTACGACCGCGCGCTCGTCCGCCCGCTGTCGCGGCTCACCGGCCACGCGCGCGGCGTCACCCTGCGGCAGCGGATGGGCATCGGCCTGGCGCTCTTCGCCGTGGCCATGGCCGTGGCCGCGCGCACCGAGGCCGCCCGCCGCGCCGAGGCGCTGGCCGAGGGTCTCCGCGACTACGGCCCGCAGTCGGGCCGCGCCGTGCGCATGTCCGCCATGCGGCTGGTGCCGCAGCACTGCATCACGGGACTCGCCGAGGCGCTGAACCTGATCGGGCAGATCGAGTTCTACTACTCCGAGTTCCCCAAGACCATGTCCAGCATCGGCGTCTCGCTGCTGGCGCTCGGCATGGGGTTCGGCAGCGTGGCCGGGAGCGCCATCGTCGGGGCCATCAACGCCGGCACCAGGAGCGGCGGCGGCCGCGACAGCTGGCTCTCCAGCAACCTCAACAGGGGGCACTACGACTACTACTACCTCGTCCTCGCCGCGCTGTGCGTTGCCAACCTCGCCTACTTCGTGTGGTGCGGATGGGCGTACGGCGAGGAGGGCCAGAACCGGGTGACCGCGGAGGAGGAAGCGGTGGAAGACACCAAGACCAAGGAAGAACAGCAGCAGAAACTGCAAAACCTTTTTAGTGAGGCAGGCTGCTGCTGTGTCTGCTTCAGCTTTCTACTTCTCTAGTTCTCTCTTGTGAAAATTGTAGTAATATTTACATGTATATGTTGGTGCAAAAATGGATGGTTCGACCTCGAATCCTATCAGCCCTCCGGATCCAAAGATCCTACAGGGCACAGGCTGCTACCTGCAACGTTAAAATGCTAGTAGTAGCAGCAGTTTTTTTTTTTCTGTTACTTGGATGGGTTGCATATAAGTAGTGATAAAAACGGTGACAGAAATTTT]
[-] EMBL BU667073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGCGTGCTGCCGATATGGTCTGACGGGGTTCATGTCCCGGCGTGATCATCGGCCAGCAGATGTTCCCCGTGCTTCAGGCGAAGACGATGGAGCGGCGGGT GGCGGTCTGGAGGATCCCCGCGGCGTCGTTCGGCGTCTTCAGCATCCTCACGCTCACCGTCTGGGTGGCCGTCTACGACCGCGCGCTCGTCCGCCCGCTGTC CGGCTCACCGGCCACGCGCGCGGCGTCACCCTGCGGCAGCGGATGGGCATCGGCCTGGCGCTCTTCGCCGTGGCCATGGCCGTGGCCGCGCGCACCGAGGCCGCCCGCCGCGCCGAGGCGTTGGCCGAGGGTCTCCGCGACTACGGCCCGCAGTC GGCCGCGCCGTGCGCATGTCCGCCATGCGGCTGGTACCGCAGCACTGCATCACGGGACTCGCCGAGGCGCTGAACCTGATCGGGCAGATCGAGTTCTACTACTCCGAGTTCCCCAAGACCATGTCCAGCATCGGCGTCTCGCTGCTGGCGCTCGGCATGGGGTTCGGCAGCGTGGCCGGGAGCGCCATCGTCGGGGCCATCAACGCCGGCACCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_2053#0 AGTGTACTAGGTAGACACACTAGCTAGCTAGAGTGATCCAGCTAGCATGGAGGCCTCAGC CATGGAGGAGGCCCTCTCGAAGAAGACGACGAGCAAGGGAGGCCTCAGGACCATACCATT CATCATCTCGAACGAGGTGTTCGAGAAGGTGGCCACGTTCGGGCTGCACGCCAACATGAT CCTCTACCTCACCGAGAGGTACCACATGACGGCGGCCACCGGCACCGTCGTGCTCTACTT CTGGAACGCGCTCTCCAACTTCCTCCCCATCTTCGGCGCCGTCCTCTCCGACTCCTGCCT CGGCCGCTTCCGCGTCATCGCCCTCGGCTCCGTCGTCAGCCTCGCCGGGATGTGCCTGCT GTGGCTGACGGCGATACTGCCGGCGGACAGGAGGACGCCGGAGTGCGAGGCGAGGCGGGA TGACTGTCAGCTGGTGCCGTGGCAGCTGCCGCTGCTGTTCGCGTCGTTCGTTCTCATGTC GGTTGGGTCGGGTGGCATCCGGCCGTGCGCGCTGGCGTTCGGGGCGGACCAGCTGGACCG GCGCGACAACAGCGCCCGGAACGTGCGTACGCTGCAGACCTTCTTCAACTGGTACTACAC CGTGCTGGGCCTCTCCATCGTGCTCGCCTCCACCGTCATCGTGTACATCCAGCAGGCCAA GGGGTGGGTCATCGGCTTCGCCGTGCCCGTCGTGCTCATGCTCACCGCGCTCACGCTGCT CCTCCTCGGCTCGCCCTTCTACCTCAAGGCGGAGGCCGACAGGAGCGTGCTCGTCGGCCT CGTGCAGGTGCTCGTCGCCAGCTACAGGAAGAGGAGGGGTCCCTTGCCGCCGGAGACGGC CGACGCGTCGCGCTTCCACAACCGGGCCGGGTACAAGCCGAGGACTCCGTCGAACAGGTT GAGGTGGTTGAACCGTGCGTGCGCGCTGGGGGACAACCCGGACAAGGAGGTGAACCCCGA CGACGGCTCGGCGCGCGACCCGTGGACGCTGTGCACGGTGCAGCAGGTGGAGGACGTCAA GGCCGCCGTCCGCGTGCTGCCGATATGGTCGACGGGGTTCATGCCCGGCGTGATCATCGG CCAGCAGATGTTCCCCGTGCTGCAGGCGAAGACGATGGAGCGGCGGGTGGGCGGGCTGGA GATCCCCGCGGCGTCGTTCGGCGTCTTCAGCATCCTCACGCTCACCGTCTGGGTGGCCGT CTACGACCGCGCGCTCGTCCGCCCGCTGTCGCGGCTCACCGGCCACGCGCGCGGCGTCAC CCTGCGGCAGCGGATGGGCATCGGCCTGGCGCTCTTCGCCGTGGCCATGGCCGTGGCCGC GCGCACCGAGGCCGCCCGCCGCGCCGAGGCGCTGGCCGAGGGTCTCCGCGACTACGGCCC GCAGTCGGGCCGCGCCGTGCGCATGTCCGCCATGCGGCTGGTGCCGCAGCACTGCATCAC GGGACTCGCCGAGGCGCTGAACCTGATCGGGCAGATCGAGTTCTACTACTCCGAGTTCCC CAAGACCATGTCCAGCATCGGCGTCTCGCTGCTGGCGCTCGGCATGGGGTTCGGCAGCGT GGCCGGGAGCGCCATCGTCGGGGCCATCAACGCCGGCACCAGGAGCGGCGGCGGCCGCGA CAGCTGGCTCTCCAGCAACCTCAACAGGGGGCACTACGACTACTACTACCTCGTCCTCGC CGCGCTGTGCGTTGCCAACCTCGCCTACTTCGTGTGGTGCGGATGGGCGTACGGCGAGGA GGGCCAGAACCGGGTGACCGCGGAGGAGGAAGCGGTGGAAGACACCAAGACCAAGGAAGA ACAGCAGCAGAAACTGCAAAACCTTTTTAGTGAGGCAGGCTGCTGCTGTGTCTGCTTCAG CTTTCTACTTCTCTAGTTCTCTCTTGTGAAAATTGTAGTAATATTTACATGTATATGTTG GTGCAAAAATGGATGGTTCGACCTCGAATCCTATCAGCCCTCCGGATCCAAAGATCCTAC AGGGCACAGGCTGCTACCTGCAACGTTAAAATGCTAGTAGTAGCAGCAGTTTTTTTTTTT CTGTTACTTGGATGGGTTGCATATAAGTAGTGATAAAAACGGTGACAGAAATTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)