cluster # 2112

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Oryza sativa
cluster # 2112 cluster # 2112 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2112#0 length = 794 sequences # 2

consensusID : consensus_2112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 794
fasta sequence

                              [CCCTTTTTTTTTTTGCAGCATATCATCCTGCTGAAGCTAAATCCAATGCAAGATCCTGTTTGGAGCTGCTTTCTGAAAATGTACCTATTGTAAACTGGCCCTTTCAACATACTGCCAATGAATGCATACACGGTTGGCCTGATGTTGGGGGCCTGACAAACTTGCATAATTGATCTACCGCGATGGTGACATAACTGAAGCTGTTTCACCTGCAAAATCAGGAGCACTATTCATCTTGATAGGATGCAGGGATCTTGTCAGGCAAAACTCAAGATGCTTGCAGAATGTGTTGTTCAACTGTTGTCCAAGCTTGTGTGCCTCCTACTTGATGGAGCCTAATGCAAATAAAGGACGCCAGCACTAATAA-AATTATATGTTCCA-TGAAAAAAAC-AAACAAGCAAAAACCAAAATAAGCCTCATGGTACCAAAAACTAGCATTGTTTTGCTTATTCATAAGCTTATTCGAATCACTTATTAACAAATAAAAAATCATTTGTGAGTAAAACTTTTATATATGTGGCCTTAGCGACTCAAAAGCAAATGATGTAAAATAAACTATGATGAAAAAACCAAAAAATCAAGTTCTAAAATTCAAATTTTGGATTATAAGCATAAGCATAAGCCAAACAATGAGGGCCATAAAAAATGTAAAGGCAAATTGTGAGCCAGTGACCTGTCTTTTGCATACTCTGTCTTGGTCTATCCACAACCTACAACCTAAAATTATGCAACTGAAGCAATCCAGCATTAAAACCAAAGATTGAAAATACAGCACCATTATTTACTTATCTGCA]

[+] EMBL CB667687             [CCCTTTTTTTTTTTGCAGCATATCATCCTGCTGAAGCTAAATCCAATGCAAGATCCTGTTTGGAGCTGCTTTCTGAAAATGTACCTATTGTAAACTGGCCCTTTCAACATACTGCCAATGAATGCATACACGGTTGGCCTGATGTTGGGGGCCTGACAAACTTGCATAATTGATCTACCGCGATGGTGACATAACTGAAGCTGTTTCACCTGCAAAATCAGGAGCACTATTCATCTTGATAGGATGCAGGGATCTTGTCAGGCAAAACTCAAGATGCTTGCAGAATGTGTTGTTCAACTGTTGTCCAAGCTTGTGTGCCTCCTACTTGATGGAGCCTAATGCAAATAAAGGACGCCAGCACTAATAA AATTATATGTTCCA TGAAAAAAAC AAACAAGCAAAAACCAAAATAAGCCTCATGGTACCAAAAACTAGCATTGTTTTGCTTATTCATAAGCTTATTCGAATCACTTATTAACAAATAAAAAATCATTTGTGAGTAAAACTTTTATATATGTGGCCTTAGCGACTCAAAAGCAAATGATGTAAAATAAACTATGATGAAAAAACCAAAAAATCAAGTTCTAAAATTCAAATTTTGGATTATAAGCATAAGCATAAGCCAAACAATGAGGGCCATAAAAAATGTAAAGGCAAATTGTGAGCCAGTGACCTGTCTTTTGCATACTCTGTCTTGGTCTATCCACAACCTACAACCTAAAATTATGCAACTGAAGCAATCCAGCATTAAAACCAAAGATTGAAAATACAGCACCATTATTTACTTATCTGCA]
[-] EMBL BI812193             [    TTTTTTTTTTGCAGTATATCATCCTGCTGAAGCTAAATCCAATGCAAGATCCTG TTGGAGCTGCTTTCTGAAAATGTACGTA TGTAAACTGGCCCTTTCAGCATACTGCCAATGAATGCATACACGGTTGGCCTGATGTTGGGGGCCTGACAGACTTGCATAATTGATCTACCGTGATGGTGACATAACTGAAGTTGTTTCAGCTGCAAAATCAGGAGCACTATTCATCTTGATAGTATGCAGGGATCTTGTCAGGCAAGACTCAAGATGCTTGCAGAATGTG TGTCCAACTGTTGTCCAAGCTTGTGTGCCTCCTACTTGATGGAGCCTAATGCAAATAAAGGATGCCAGCACTAATAACAATTATATGTTCCAGTGAAAAAAACAAAACAAGCAAAAACCAAAATAAGCCTCATGGTACGAAAAACTAGCATGGTTTCG TTATTCATAAGCTTATTCGAAT                                                                                                                                                                                                                                                                                                                                      ]




>consensus_2112#0
CCCTTTTTTTTTTTGCAGCATATCATCCTGCTGAAGCTAAATCCAATGCAAGATCCTGTT
TGGAGCTGCTTTCTGAAAATGTACCTATTGTAAACTGGCCCTTTCAACATACTGCCAATG
AATGCATACACGGTTGGCCTGATGTTGGGGGCCTGACAAACTTGCATAATTGATCTACCG
CGATGGTGACATAACTGAAGCTGTTTCACCTGCAAAATCAGGAGCACTATTCATCTTGAT
AGGATGCAGGGATCTTGTCAGGCAAAACTCAAGATGCTTGCAGAATGTGTTGTTCAACTG
TTGTCCAAGCTTGTGTGCCTCCTACTTGATGGAGCCTAATGCAAATAAAGGACGCCAGCA
CTAATAAAATTATATGTTCCATGAAAAAAACAAACAAGCAAAAACCAAAATAAGCCTCAT
GGTACCAAAAACTAGCATTGTTTTGCTTATTCATAAGCTTATTCGAATCACTTATTAACA
AATAAAAAATCATTTGTGAGTAAAACTTTTATATATGTGGCCTTAGCGACTCAAAAGCAA
ATGATGTAAAATAAACTATGATGAAAAAACCAAAAAATCAAGTTCTAAAATTCAAATTTT
GGATTATAAGCATAAGCATAAGCCAAACAATGAGGGCCATAAAAAATGTAAAGGCAAATT
GTGAGCCAGTGACCTGTCTTTTGCATACTCTGTCTTGGTCTATCCACAACCTACAACCTA
AAATTATGCAACTGAAGCAATCCAGCATTAAAACCAAAGATTGAAAATACAGCACCATTA
TTTACTTATCTGCA

clustalw multiple alignements is not computed in this case