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Oryza sativa
cluster # 2119 cluster # 2119       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2119#0 length = 1885 sequences # 2  

consensusID : consensus_2119#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1885
fasta sequence
                              [TCCATCTTTGGAGAACTTCTACCTTGTGACTCCACGAAAGTGCTTGGTGATGACTTTTCCAGGTGGATGCTGTTGGAGAGAGTCCTGTTTACATTAGATGGTCTTGAATGTAATAAGATTGGAGTTGGCTATGAAGCTTTCAGGAGCCAGCCTAACTTTTGTTCATCGCCACTTGACAGCTGCTTGGGCGATCAGCTTTCCAAATTTTGGGAGATTGACAAAAACAGGGTAAACAATAGCCAACCACCCCAATACGTTGTTCTGGGAAAGTTTGAAAGGATCAACCAATATCCGAATGCAGGAGTTCATACCTTTTCTGTGGGAATCCCAGAAGTTCTCAATACCAATTTGATGATAGAGCTGAGTGCTGATGACATAGAATATGTCTATCAGAGAAGCTCAGGGAAGATAATTAGCATTAACATCTCTTCGTTTGAAGCCTTAAGTCAAGTTGGCAGTGCTAGAGTCAAAACCAAGAATATTGGAAGACTTGAAGCTTCATATAGCTTGACGTTTGACTGCTTAAGCGGCATCAATCCCGTTGAGGAGCAGTACTTTATCATGAAGCCTGATGAAAAGCTTATTCGGACATTTGATTTGCGTTCGTCAACAGACCAAGCATCGAACTATACATGTCAAGCTATTTTGAAGGCGTCAGATTTCAGTGAACTTGACAGAAAAGAATCCCAATTCTCAACCACAGCTACAGTTCTTAACAATGGAACACAGATTGGTTCGTCCGAAAACCACACAAAGGGTGGCATCTGGGGTTTCTTTGAAGCCATCAAAGCCTGGTGCGCCAAAATGTGGCACATGCTGATTAATTTCTTCACTGGTACAACATGCAGCACGAGATGCTGGAGCTTCCTCAAGTTCGTCATCCACGGCCTGCTACTTGTCGCAGTCCTGTGGCTTCTGCACCGGAAAGGGCTCTTCGATCCACTGTACTATTGGTGGGACGGCGTGGTCGGGTCGGAGGCGCAGGAGCGCGCGCGCCGGAGGCACAAGAGAGCTCACAGCCACAGGCACTCCCACCACCACGACGCGCACAAGAGGCACAAGACCGAGCTTGCCGGCCACCGCCGCCACCACGTCCTCCACATACATGACGACGACGACCCGGTGGCGGCGGCGGCGGCGGCGGAGCACGTCATCCTCCGCCGGCACGGCAGGCACGAGGCGGCGCTCGGCGTGCAGCACAGGGACGGGCTCAAGCTCAACAAGCACCGGCGCCACGGTGGCAAGGCGGTTGCGCTACTGCCGCCGGGGGAGATCATCGTCCGGGACGGTGGCGGCTGCGGCGGCGTGGAGCACGGTGATCGGAGGCACCACGCGTGGCACTGACGCCGACGCCGGTCGCCGGCGCGGTTTAAAATGGCGTTGACATACTGACAAGTGCACATTATGATCGATGTTGTAAATGTTGCTGCTGACGCACGGAACCATTGTATTGTGTGAATGCTGATGTTTCATCTGATGCTTCCTCCCGGTGTGGCGGTGTAGTCTTGGAAGTTAACCCGAGTGTGGTTTCTGGAATCTGGTGGGTACGTTAGAATTGGAGTGTGAGAGTCAAGCTTTTGTTGGTTGTTGCGA-CAGTGCGACACTGACGTTTCCTCCTCTCGCCGTAGATTGCTGTCTGTTTGCGTGTGATTTACTGGACTTGTGGGGCAGGTTAGAGGCAGAGCA-CCGTGAGGTGTTCATTTCTGACGAAGTACTAGGAGGAGAGTAGGTACAGGGGCACAGTCAAGGAAAAGCAGAACATAGGCCTTGCTTTTCAATAGTAAAGGGTTATGACTAAATGGCTTCTTCATTTTTAAATAGTGTTGTTAACCTTCAAATTGTTTGATCATTCATCTTGCTAAAATAACATGTAATTATTATTTAA]

[+] EMBL AK064676             [TCCATCTTTGGAGAACTTCTACCTTGTGACTCCACGAAAGTGCTTGGTGATGACTTTTCCAGGTGGATGCTGTTGGAGAGAGTCCTGTTTACATTAGATGGTCTTGAATGTAATAAGATTGGAGTTGGCTATGAAGCTTTCAGGAGCCAGCCTAACTTTTGTTCATCGCCACTTGACAGCTGCTTGGGCGATCAGCTTTCCAAATTTTGGGAGATTGACAAAAACAGGGTAAACAATAGCCAACCACCCCAATACGTTGTTCTGGGAAAGTTTGAAAGGATCAACCAATATCCGAATGCAGGAGTTCATACCTTTTCTGTGGGAATCCCAGAAGTTCTCAATACCAATTTGATGATAGAGCTGAGTGCTGATGACATAGAATATGTCTATCAGAGAAGCTCAGGGAAGATAATTAGCATTAACATCTCTTCGTTTGAAGCCTTAAGTCAAGTTGGCAGTGCTAGAGTCAAAACCAAGAATATTGGAAGACTTGAAGCTTCATATAGCTTGACGTTTGACTGCTTAAGCGGCATCAATCCCGTTGAGGAGCAGTACTTTATCATGAAGCCTGATGAAAAGCTTATTCGGACATTTGATTTGCGTTCGTCAACAGACCAAGCATCGAACTATACATGTCAAGCTATTTTGAAGGCGTCAGATTTCAGTGAACTTGACAGAAAAGAATCCCAATTCTCAACCACAGCTACAGTTCTTAACAATGGAACACAGATTGGTTCGTCCGAAAACCACACAAAGGGTGGCATCTGGGGTTTCTTTGAAGCCATCAAAGCCTGGTGCGCCAAAATGTGGCACATGCTGATTAATTTCTTCACTGGTACAACATGCAGCACGAGATGCTGGAGCTTCCTCAAGTTCGTCATCCACGGCCTGCTACTTGTCGCAGTCCTGTGGCTTCTGCACCGGAAAGGGCTCTTCGATCCACTGTACTATTGGTGGGACGGCGTGGTCGGGTCGGAGGCGCAGGAGCGCGCGCGCCGGAGGCACAAGAGAGCTCACAGCCACAGGCACTCCCACCACCACGACGCGCACAAGAGGCACAAGACCGAGCTTGCCGGCCACCGCCGCCACCACGTCCTCCACATACATGACGACGACGACCCGGTGGCGGCGGCGGCGGCGGCGGAGCACGTCATCCTCCGCCGGCACGGCAGGCACGAGGCGGCGCTCGGCGTGCAGCACAGGGACGGGCTCAAGCTCAACAAGCACCGGCGCCACGGTGGCAAGGCGGTTGCGCTACTGCCGCCGGGGGAGATCATCGTCCGGGACGGTGGCGGCTGCGGCGGCGTGGAGCACGGTGATCGGAGGCACCACGCGTGGCACTGACGCCGACGCCGGTCGCCGGCGCGGTTTAAAATGGCGTTGACATACTGACAAGTGCACATTATGATCGATGTTGTAAATGTTGCTGCTGACGCACGGAACCATTGTATTGTGTGAATGCTGATGTTTCATCTGATGCTTCCTCCCGGTGTGGCGGTGTAGTCTTGGAAGTTAACCCGAGTGTGGTTTCTGGAATCTGGTGGGTACGTTAGAATTGGAGTGTGAGAGTCAAGCTTTTGTTGGTTGTTGCGA CAGTGCGACACTGACGTTTCCTCCTCTCGCCGTAGATTGCTGTCTGTTTGCGTGTGATTTACTGGACTTGTGGGGCAGGTTAGAGGCAGAGCA CCGTGAGGTGTTCATTTCTGACGAAGTACTAGGAGGAGAGTAGGTACAGGGGCACAGTCAAGGAAAAGCAGAACATAGGCCTTGCTTTTCAATAGTAAAGGGTTATGACTAAATGGCTTCTTCATTTTTAAATAGTGTT                                                            ]
[+] EMBL BQ907449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGATGTTTCATCTGATGCTTCCTCCCGGTGTGGCGGTGTAGTCTTGGAAGTTAACCCGAGTGTGGTTTCTGGAATCTGGTGGGTACGTTAGAATTGGAGTGTGAGAGTCAAGCTTTTGTTGGTTGTTGCGACCAGTGCGACACTGACGTTTCCTCCTCTCGCCGTAGATTGCTGTCTGTTTGCGTGTGATTTACTGGACTTGTGGGGCAGGTTAGAGGCAGAGCACCCGTGAGGTGTTCATTTCTGACGAAGTACTAGGAGGAGAGTAGGTACAGGGGCACAGTCAAGG AAAGCAGAACATAGGCCTTGCTTTTCAATAGTAAAGGGTTATGACTAAATGGCTTCTTCATTTTTAAATAGTGTTGTTAACCTTCAAATTGTTTGATCATTCATCTTGCTAAAATAACATGTAATTATTATTTAA]


>consensus_2119#0 TCCATCTTTGGAGAACTTCTACCTTGTGACTCCACGAAAGTGCTTGGTGATGACTTTTCC AGGTGGATGCTGTTGGAGAGAGTCCTGTTTACATTAGATGGTCTTGAATGTAATAAGATT GGAGTTGGCTATGAAGCTTTCAGGAGCCAGCCTAACTTTTGTTCATCGCCACTTGACAGC TGCTTGGGCGATCAGCTTTCCAAATTTTGGGAGATTGACAAAAACAGGGTAAACAATAGC CAACCACCCCAATACGTTGTTCTGGGAAAGTTTGAAAGGATCAACCAATATCCGAATGCA GGAGTTCATACCTTTTCTGTGGGAATCCCAGAAGTTCTCAATACCAATTTGATGATAGAG CTGAGTGCTGATGACATAGAATATGTCTATCAGAGAAGCTCAGGGAAGATAATTAGCATT AACATCTCTTCGTTTGAAGCCTTAAGTCAAGTTGGCAGTGCTAGAGTCAAAACCAAGAAT ATTGGAAGACTTGAAGCTTCATATAGCTTGACGTTTGACTGCTTAAGCGGCATCAATCCC GTTGAGGAGCAGTACTTTATCATGAAGCCTGATGAAAAGCTTATTCGGACATTTGATTTG CGTTCGTCAACAGACCAAGCATCGAACTATACATGTCAAGCTATTTTGAAGGCGTCAGAT TTCAGTGAACTTGACAGAAAAGAATCCCAATTCTCAACCACAGCTACAGTTCTTAACAAT GGAACACAGATTGGTTCGTCCGAAAACCACACAAAGGGTGGCATCTGGGGTTTCTTTGAA GCCATCAAAGCCTGGTGCGCCAAAATGTGGCACATGCTGATTAATTTCTTCACTGGTACA ACATGCAGCACGAGATGCTGGAGCTTCCTCAAGTTCGTCATCCACGGCCTGCTACTTGTC GCAGTCCTGTGGCTTCTGCACCGGAAAGGGCTCTTCGATCCACTGTACTATTGGTGGGAC GGCGTGGTCGGGTCGGAGGCGCAGGAGCGCGCGCGCCGGAGGCACAAGAGAGCTCACAGC CACAGGCACTCCCACCACCACGACGCGCACAAGAGGCACAAGACCGAGCTTGCCGGCCAC CGCCGCCACCACGTCCTCCACATACATGACGACGACGACCCGGTGGCGGCGGCGGCGGCG GCGGAGCACGTCATCCTCCGCCGGCACGGCAGGCACGAGGCGGCGCTCGGCGTGCAGCAC AGGGACGGGCTCAAGCTCAACAAGCACCGGCGCCACGGTGGCAAGGCGGTTGCGCTACTG CCGCCGGGGGAGATCATCGTCCGGGACGGTGGCGGCTGCGGCGGCGTGGAGCACGGTGAT CGGAGGCACCACGCGTGGCACTGACGCCGACGCCGGTCGCCGGCGCGGTTTAAAATGGCG TTGACATACTGACAAGTGCACATTATGATCGATGTTGTAAATGTTGCTGCTGACGCACGG AACCATTGTATTGTGTGAATGCTGATGTTTCATCTGATGCTTCCTCCCGGTGTGGCGGTG TAGTCTTGGAAGTTAACCCGAGTGTGGTTTCTGGAATCTGGTGGGTACGTTAGAATTGGA GTGTGAGAGTCAAGCTTTTGTTGGTTGTTGCGACAGTGCGACACTGACGTTTCCTCCTCT CGCCGTAGATTGCTGTCTGTTTGCGTGTGATTTACTGGACTTGTGGGGCAGGTTAGAGGC AGAGCACCGTGAGGTGTTCATTTCTGACGAAGTACTAGGAGGAGAGTAGGTACAGGGGCA CAGTCAAGGAAAAGCAGAACATAGGCCTTGCTTTTCAATAGTAAAGGGTTATGACTAAAT GGCTTCTTCATTTTTAAATAGTGTTGTTAACCTTCAAATTGTTTGATCATTCATCTTGCT AAAATAACATGTAATTATTATTTAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)