cluster # 2139

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Oryza sativa
cluster # 2139 cluster # 2139 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2139#0 length = 486 sequences # 2

consensusID : consensus_2139#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 486
fasta sequence

                              [TTTCCGAGATGTCAATGAGCAAGACGTACTATTATTTATTGATAACATCTTCCGTTTTGTCCAAGCGGGATCAGAGGTATCCGCCCTATTAGGCAGAATGCCTTCCGCCGTGGGTTATCAGCCAACTCTTAGCACGGAAATGGGTTCTTTGCAAGAGAGAATTACTTCCACAAAAAAGGGATCCATAACCTCGATTCAAGCAGTTTATGTACCTGCTGACGACTTGACCGACCCTGCTCCTGCTACGACATTTGCACATTCAGATGCTACTACCGTACTATCGAGAGGATTAGCTGCGAAGGGTATCTATCCAGCAGTGGATCCTTTAGATTCAACATGGACTATGCTGCAACCTTGGATCGCATGCGAAGAACATTACCAAACTGCACAAGGGGTTAAGCAAACTTTACAACGTTATAAGGAACTTCAAGACATTATAGCTATTCCTGGACTGGATGAATTATCAGAGGAAGATCGTTTAATCGT]

[+] EMBL CF339052             [TTTCCGAGATGTCAATGAGCAAGACGTACTATTATTTATTGATAACATCTTCCGTTTTGTCCAAGCGGGATCAGAGGTATCCGCCCTATTAGGCAGAATGCCTTCCGCCGTGGGTTATCAGCCAACTCTTAGCACGGAAATGGGTTCTTTGCAAGAGAGAATTACTTCCACAAAAAAGGGATCCATAACCTCGATTCAAGCAGTTTATGTACCTGCTGACGACTTGACCGACCCTGCTCCTGCTACGACATTTGCACATTCAGATGCTACTACCGTACTATCGAGAGGATTAGCTGCGAAGGGTATCTATCCAGCAGTGGATCCTTTAGATTCAACATGGACTATGCTGCAACCTTGGATCGCATGCGAAGAACATTACCAAACTGCAC                                                                                                 ]
[+] EMBL CF339019             [  TCCGAGATGTCAATGAGCAAGACGTACTATTATTTATTGATAACATCTTCCGTTTTGTCCAAGCGGGATCAGAGGTATCCGCCCTATTAGGCAGAATGCCTTCCGCCGTGGGTTATCAGCCAACTCTTAGCACGGAAATGGGTTCTTTGCAAGAGAGAATTACTTCCACAAAAAAGGGATCCATAACCTCGATTCAAGCAGTTTATGTACCTGCTGACGACTTGACCGACCCTGCTCCTGCTACGACATTTGCACATTCAGATGCTACTACCGTACTATCGAGAGGATTAGCTGCGAAGGGTATCTATCCAGCAGTGGATCCTTTAGATTCAACATCGACTATGCTCCAACCTTGGATCGTAGGCGAAGAACATTACCAAACTGCACAAGGGGTTAAGCAAACTTTACAACGTTATAAGGAACTTCAAGACATTATAGCTATTCCTGGACTGGATGAATTATCAGAGGAAGATCGTTTAATCGT]




>consensus_2139#0
TTTCCGAGATGTCAATGAGCAAGACGTACTATTATTTATTGATAACATCTTCCGTTTTGT
CCAAGCGGGATCAGAGGTATCCGCCCTATTAGGCAGAATGCCTTCCGCCGTGGGTTATCA
GCCAACTCTTAGCACGGAAATGGGTTCTTTGCAAGAGAGAATTACTTCCACAAAAAAGGG
ATCCATAACCTCGATTCAAGCAGTTTATGTACCTGCTGACGACTTGACCGACCCTGCTCC
TGCTACGACATTTGCACATTCAGATGCTACTACCGTACTATCGAGAGGATTAGCTGCGAA
GGGTATCTATCCAGCAGTGGATCCTTTAGATTCAACATGGACTATGCTGCAACCTTGGAT
CGCATGCGAAGAACATTACCAAACTGCACAAGGGGTTAAGCAAACTTTACAACGTTATAA
GGAACTTCAAGACATTATAGCTATTCCTGGACTGGATGAATTATCAGAGGAAGATCGTTT
AATCGT

clustalw multiple alignements is not computed in this case