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Oryza sativa
cluster # 216 cluster # 216       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_216#0 length = 1383 sequences # 2  

consensusID : consensus_216#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1383
fasta sequence
                              [CATTGAGGCCACCACCGATTCAGCGAGAATGACGTCGTTACGCTGCAGCAGCGCACGTGTGCTCCCATGGCTCGGACTCTCGCTTCTGCTCGCGTCACTGCCACCTCCGACCGCAATGGCGGCCACCGATCGCCGCCGCCCGACGCCGTCCAAGCCCATCGTGGCGCGCCTCGGCAAGGATGCCGCCGCTCGTCGTCGACCTCGCCGGCCCGCTGCTCTGGTCGACGTGCCCGCCCGCGCACCGCACGGTCCCATGCAGCTCCAGCGTGTGCAAGGTGGCGAACTGGTACCGGTCTCCGGCCAGCTGCCCGTACTCCGACGGCGGCCGGCCGGGCTCCGGCGACAGGGGGTGCGCCTGCGCCGCGTACCCGTACAACCCGGTGAGTGGGCAGTGCGGACGCGGGGACGTCGCCGCCGTGCCGCTCGCCGCGAACGCCACGGACGGCAAGAACCCGCTGTTCCCGGTGTCGTTCTCGGCGTTCGCGTCGTGCGCGCCCAGCGGGCTCCTGGCGTCGCTCCCGTCGGGTGTCGCCGGCGTCGCGGGGATGTCGAGGCTGCCGCTGTCGCTGCCGTCCCAGGTGGCGTCGTCGCTGAAGGTGGAGAGGCAGTTCGCGCTGTGCCTTCCGGCCAGCGGCGGCGGCGGCGACGGCGCGGCCATCTTCGGCGGCGGGCCGTTCCAGCTCCTAGCGGCGCCGCCCATGGAGATCGCCGAAGGTCTCCGCCGCAACCCCGTGCCCCTCCTCAAGAACCCCAAGAATGGCGCCTACTACCTCCGCGTCACCGGCATCGCCGTCAACCTCGAGGCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGCCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGATCTGGAGAAGGGGACGCTGGGGATCAGATGAACTGATTTTGTACTTCCATTTTAGTAGTACTTCAGAAGTCCAGATGTGTGTAACTCACGTACTGTTGGTGGGTTAGCGATCGGAATAAACGACCAAACGGTAAGATCAACCAAATAGTAATTACGGC]

[+] EMBL AK063356             [CATTGAGGCCACCACCGATTCAGCGAGAATGACGTCGTTACGCTGCAGCAGCGCACGTGTGCTCCCATGGCTCGGACTCTCGCTTCTGCTCGCGTCACTGCCACCTCCGACCGCAATGGCGGCCACCGATCGCCGCCGCCCGACGCCGTCCAAGCCCATCGTGGCGCGCCTCGGCAAGGATGCCGCCGCTCGTCGTCGACCTCGCCGGCCCGCTGCTCTGGTCGACGTGCCCGCCCGCGCACCGCACGGTCCCATGCAGCTCCAGCGTGTGCAAGGTGGCGAACTGGTACCGGTCTCCGGCCAGCTGCCCGTACTCCGACGGCGGCCGGCCGGGCTCCGGCGACAGGGGGTGCGCCTGCGCCGCGTACCCGTACAACCCGGTGAGTGGGCAGTGCGGACGCGGGGACGTCGCCGCCGTGCCGCTCGCCGCGAACGCCACGGACGGCAAGAACCCGCTGTTCCCGGTGTCGTTCTCGGCGTTCGCGTCGTGCGCGCCCAGCGGGCTCCTGGCGTCGCTCCCGTCGGGTGTCGCCGGCGTCGCGGGGATGTCGAGGCTGCCGCTGTCGCTGCCGTCCCAGGTGGCGTCGTCGCTGAAGGTGGAGAGGCAGTTCGCGCTGTGCCTTCCGGCCAGCGGCGGCGGCGGCGACGGCGCGGCCATCTTCGGCGGCGGGCCGTTCCAGCTCCTAGCGGCGCCGCCCATGGAGATCGCCGAAGGTCTCCGCCGCAACCCCGTGCCCCTCCTCAAGAACCCCAAGAATGGCGCCTACTACCTCCGCGTCACCGGCATCGCCGTCAACCTCGAGGCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGCCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGATCTGGAGAAGGGGACGCTGGGGATCAGATGAACTGATTTTGTACTTCCATTTTAGTAGTACTTCAGAAGTCCAGATGTGTGTAACTCACGTACTGTTGGTGGGTTAGCGATCGGAATAAACGACCAAA                              ]
[-] EMBL AK111477             [                                                                                                                                                                                                                                                                                                                                       GGCCGGGCTCCGGCGACAGGGGGTGCGCCTGCGCCGCGTACCCGTACAACCCGGTGAGTGGGCAGTGCGGACGCGGGGACGTCGCCGCCGTGCCGCTCGCCGCGAACGCCACGGACGGCAAGAACCCGCTGTTCCCGGTGTCGTTCTCGGCGTTCGCGTCGTGCGCGCCCAGCGGGCTCCTGGCGTCGCTCCCGTCGGGTGTCGCCGGCGTCGCGGGGATGTCGAGGCTGCCGCTGTCGCTGCCGTCCCAGGTGGCGTCGTCGCTGAAGGTGGAGAGGCAGTTCGCGCTGTGCCTTCCGGCCAGCGGCGGCGGCGGCGACGGCGCGGCCATCTTCGGCGGCGGGCCGTTCCAGCTCCTAGCGGCGCCGCCCATGGAGATCGCCGAAGGTCTCCGCCGCAACCCCGTGCCCCTCCTCAAGAACCCCAAGAATGGCGCCTACTACCTCCGCGTCACCGGCATCGCCGTCAACCTCGAGGCGGTGCCCACCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGCCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGGACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGATCTGGAGAAGGGGACGCTGGGGATCAGATGAACTGATTTTGTACTTCCATTTTAGTAGTACTTCAGAAGTCCAGATGTGTGTAACTCACGTACTGTTGGTGGGTTAGCGATCGGAATAAACGACCAAACGGTAAGATCAACCAAATAGTAATTACGGC]


>consensus_216#0 CATTGAGGCCACCACCGATTCAGCGAGAATGACGTCGTTACGCTGCAGCAGCGCACGTGT GCTCCCATGGCTCGGACTCTCGCTTCTGCTCGCGTCACTGCCACCTCCGACCGCAATGGC GGCCACCGATCGCCGCCGCCCGACGCCGTCCAAGCCCATCGTGGCGCGCCTCGGCAAGGA TGCCGCCGCTCGTCGTCGACCTCGCCGGCCCGCTGCTCTGGTCGACGTGCCCGCCCGCGC ACCGCACGGTCCCATGCAGCTCCAGCGTGTGCAAGGTGGCGAACTGGTACCGGTCTCCGG CCAGCTGCCCGTACTCCGACGGCGGCCGGCCGGGCTCCGGCGACAGGGGGTGCGCCTGCG CCGCGTACCCGTACAACCCGGTGAGTGGGCAGTGCGGACGCGGGGACGTCGCCGCCGTGC CGCTCGCCGCGAACGCCACGGACGGCAAGAACCCGCTGTTCCCGGTGTCGTTCTCGGCGT TCGCGTCGTGCGCGCCCAGCGGGCTCCTGGCGTCGCTCCCGTCGGGTGTCGCCGGCGTCG CGGGGATGTCGAGGCTGCCGCTGTCGCTGCCGTCCCAGGTGGCGTCGTCGCTGAAGGTGG AGAGGCAGTTCGCGCTGTGCCTTCCGGCCAGCGGCGGCGGCGGCGACGGCGCGGCCATCT TCGGCGGCGGGCCGTTCCAGCTCCTAGCGGCGCCGCCCATGGAGATCGCCGAAGGTCTCC GCCGCAACCCCGTGCCCCTCCTCAAGAACCCCAAGAATGGCGCCTACTACCTCCGCGTCA CCGGCATCGCCGTCAACCTCGAGGCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACG TCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGCCGTACACCACGCTCCGGC CCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCG CGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGC TCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCC CCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGA TGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGA TGGAGAACAATCTGCTGCTGTTTGATCTGGAGAAGGGGACGCTGGGGATCAGATGAACTG ATTTTGTACTTCCATTTTAGTAGTACTTCAGAAGTCCAGATGTGTGTAACTCACGTACTG TTGGTGGGTTAGCGATCGGAATAAACGACCAAACGGTAAGATCAACCAAATAGTAATTAC GGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)