Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2162 cluster # 2162       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2162#0 length = 655 sequences # 2  

consensusID : consensus_2162#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 655
fasta sequence
                              [CCAGTACTAAGTGTCCAGCAGCTGTACAAAATATGCACACAGTACTGGGATGACAAATACAACACAGAGAGTGTAT-CTGAAGA-GGTACTTGATGAAAT-GAGGACGCTGATAACGAAGGAATCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATATCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCACCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACCATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCTGTCCTTGCGGTTCCTTGTGTAAATTATTCTTT-TTGGTAGGTAGGGGTTCCTTTTCCCCTATGTTTTCGTTGGCT-TGGGTTGGGA-AAATTATTT-GCCCTCCCA-AAAA-TGTGTCCAAAATATGAATATA-GAAATT----CTTAGTTTTT-TTGTA-GGCATGGTA-GGGTTGTAGACACTCAAGCGCCACGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATATCGATTCCATTTTATTGTACAGAACTACTGGAAAATATCAATAAGTTAAATCATT]

[+] EMBL AK062923             [CCAGTACTAAGTGTCCAGCAGCTGTACAAAATATGCACACAGTACTGGGATGACAAATACAACACAGAGAGTGTAT CTGAAGA GGTACTTGATGAAAT GAGGACGCTGATAACGAAGGAATCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATATCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCACCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACCATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCTGTCCTTGCGGTTCCTTGTGTAAATTATTCTTT TTGGTAGGTAGGGGTTCCTTTTCCCCTATGTTTTCGTTGGCT TGGGTTGGGA AAATTATTT GCCCTCCCA AAAA TGTGTCCAAAATATGAATATA GAAATT    CTTAGTTTTT TTGTA GGCATGGTA GGGTTGTAGACACTCAAGCGCCACGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATATCGATTCCATTTTATTGTACAGAACTACTGGAAAATATCAATAAGTTAAATCATT]
[+] EMBL BQ906699             [                                                                  GAGAGTGTATCCTGAAGACGGTACTTGATGAAATCGAGGAC CTGATAACGAAGGAATCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATATCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCACCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACCATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCTGTCCTTGCGGTTCCTTGTGTAAATTATTCTTTCTTGGTAGGTAGGGGTTCCTTTTCCCCTATGTTTTCGTTGGCTATGGGTTGGGACAAATTATTTCGCCCTCCCAGAAAATTGTGTCCAAAATATGAATATACGAAATTCTTCCTTAGTTTTTCTTGTACGGCATGGTAGGGGTTGTAGACACTCGAGCGCCACGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATATCGATTCCATTTTATTGTACAGAAaaaaa                          ]


>consensus_2162#0 CCAGTACTAAGTGTCCAGCAGCTGTACAAAATATGCACACAGTACTGGGATGACAAATAC AACACAGAGAGTGTATCTGAAGAGGTACTTGATGAAATGAGGACGCTGATAACGAAGGAA TCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATA TCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCA CCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACC ATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCT GTCCTTGCGGTTCCTTGTGTAAATTATTCTTTTTGGTAGGTAGGGGTTCCTTTTCCCCTA TGTTTTCGTTGGCTTGGGTTGGGAAAATTATTTGCCCTCCCAAAAATGTGTCCAAAATAT GAATATAGAAATTCTTAGTTTTTTTGTAGGCATGGTAGGGTTGTAGACACTCAAGCGCCA CGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATA TCGATTCCATTTTATTGTACAGAACTACTGGAAAATATCAATAAGTTAAATCATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)