Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2204 cluster # 2204       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2204#0 length = 390 sequences # 2  
consensusID : consensus_2204#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 390
fasta sequence 
                              [TTNTACCGGTCCCTGGGCGAGAGGAACAATNAATCCAGAAGGGACATCTTAAGTCAAGATCTTCAGCCCTTCTTTGCAAGAAGTATGTGGACTGTAGCCATTTGAATCTNGCATTCGGATGTTTCAGTATTGCAGAGAAATAGCAGGAATTTTTGGGAGATAATGGGTGCTGGCATCTGATGGAAACTGCCCCCTTGCAACTGTGTGTGCATCAAGCTTCTGCAACNAAAAGNCCCTAATGTACATTGCACGTTGTAAAGCTGCTGATCATGTAATTCTAGTTTGTACATNCATNCACNTGTACAAGNATAAAGAGAACCACTTGTCCTTTGGAATATGNGTNTACCATTTNTTCTAAAANNNAATAAATAAAAANAATNNTAAAAATAA]

[+] EMBL C99466               [TTNTACCGGTCCCTGGGCGAGAGGAACAATNAATCCAGAAGGGACATCTTAAGTCAAGATCTTCAGCCCTTCTTTGCAAGAAGTATGTGGACTGTAGCCATTTGAATCTNGCATTCGGATGTTTCAGTATTGCAGAGAAATAGCAGGAATTTTTGGGAGATAATGGGTGCTGGCATCTGATGGAAACTGCCCCCTTGCAACTGTGTGTGCATCAAGCTTCTGCAACNAAAAGNCCCTAATGTACATTGCACGTTGTAAAGCTGCTGATCATGTAATTCTAGTTTGTACATNCATNCACNTGTACAAGNATAAAGAGAACCACTTGTCCTTTGGAATATGNGTNTACCATTTNTTCTAAAANNNAATAAATAAAAANAATNNTAAAAATAA]
[+] EMBL AW070150             [         TCCCTGGGCGAGAGGAACAATAAAT CAGAAGGGACTTCTTAAGTCAAGATCTTCAGCCCTTCTTTGCAAGAAGTATGTGGACTGTAG CATTTGAATCTAGCATTCGGATGTTTCAGTATTGCAGAGAAATAGCAGGAGTTTTTGGGGGATAATGGGTGCTGGCATCTGATGGAAACTGCCCCCTTGCAACTGTGTGTGCATCAAGCTTCTGCAACAAAAAGACCCTAATGTACctcggc                                                                                                                                            ]




>consensus_2204#0
TTNTACCGGTCCCTGGGCGAGAGGAACAATNAATCCAGAAGGGACATCTTAAGTCAAGAT
CTTCAGCCCTTCTTTGCAAGAAGTATGTGGACTGTAGCCATTTGAATCTNGCATTCGGAT
GTTTCAGTATTGCAGAGAAATAGCAGGAATTTTTGGGAGATAATGGGTGCTGGCATCTGA
TGGAAACTGCCCCCTTGCAACTGTGTGTGCATCAAGCTTCTGCAACNAAAAGNCCCTAAT
GTACATTGCACGTTGTAAAGCTGCTGATCATGTAATTCTAGTTTGTACATNCATNCACNT
GTACAAGNATAAAGAGAACCACTTGTCCTTTGGAATATGNGTNTACCATTTNTTCTAAAA
NNNAATAAATAAAAANAATNNTAAAAATAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)