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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2218 cluster # 2218       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2218#0 length = 791 sequences # 2  

consensusID : consensus_2218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 791
fasta sequence
                              [TTTTAAGTTATACTCTCTTTCTTCATTTTCTTTTCTCCATCTAATCTTAAGGTGTTCTGGTATGTCGTTTTCATCTAAATTGCAAATAATTTTTTCTCTGTCACTTTCACGAATGTACACAAGCATGTAAGCATTTGAATGCTTAGTAAACCTAAGCGGGGTGGTATTCAATCCAGGATTGGTATGTGGGAGCTCTTCCTCGCCACCGTATTGCTCCTCTAATGCCCGCTTCATGTCTTCTTTTGTCACTCGTTCATCATCAAACTTGTACCATATATCTGAAAGTGCCGGGCGTATAAAGGCGTAGTAGTGTCCACCATGACCACCACCACTATGAACAAGTACGCTGTGTAGAGTATAGAGGTTACGCACCCTCCTGTCAGCTTCTGGAGAGAGGTATTTTCCATCATCCTTGTCAAGATCTAATTGTAATGGGAACTCATAGCGGTCATTTATCTTAACCATGGTATCCCGCACAAAATCATATTCAAACCGCTTTAATTGAACTTGCAGGACTGGAGGGAAGTCAATAAAAAGCATCCCTTTCTTGGCATCCTGCAAACCATGTTTCTCAGACTGGTATTTATTATCACCTTCCAATCTCTCTACTTCAACATACTTATCAAATGATGCATAAACATCTGAACAGCCCTTGACATCAAGTGCAAGATCATAGAATGATTCTTTCCTTGTAGATTTGTAGTCAACATTAATGCACTCAATATAATTCATATGATGACCTTCAAATAGCTGTTGAATTGTCCCTTCCACAGTAGTTCCCTTCATTTTGT]

[+] EMBL CB644386             [TTTTAAGTTATACTCTCTTTCTTCATTTTCTTTTCTCCATCTAATCTTAAGGTGTTCTGGTATGTCGTTTTCATCTAAATTGCAAATAATTTTTTCTCTGTCACTTTCACGAATGTACACAAGCATGTAAGCATTTGAATGCTTAGTAAACCTAAGCGGGGTGGTATTCAATCCAGGATTGGTATGTGGGAGCTCTTCCTCGCCACCGTATTGCTCCTCTAATGCCCGCTTCATGTCTTCTTTTGTCACTCGTTCATCATCAAACTTGTACCATATATCTGAAAGTGCCGGGCGTATAAAGGCGTAGTAGTGTCCACCATGACCACCACCACTATGAACAAGTACGCTGTGTAGAGTATAGAGGTTACGCACCCTCCTGTCAGCTTCTGGAGAGAGGTATTTTCCATCATCCTTGTCAAGATCTAATTGTAATGGGAACTCATAGCGGTCATTTATCTTAACCATGGTATCCCGCACAAAATCATATTCAAACCGCTTTAATTGAACTTGCAGGACTGGAGGGAAGTCAATAAAAAGCATCCCTTTCTTGGCATCCTGCAAACCATGTTTCTCAGACTGGTATTTATTATCACCTTCCAATCTCTCTACTTCAACATACTTATCAAATGATGCATAAACATCTGAACAGCCCTTGACATCAAGTGCAAGATCATAGAATGATTCTTTCCTTGTAGATTTGTAGTCAACATTAATGCACTCAATATAATTCATATGATGACCTTCAAATAGCTGTTGAATTGTCCCTTCCACAGTAGTTCCCTTCATTTTGT]
[-] EMBL BE229401             [                                                                                         TTTTTTCTCTGTCACTTTCACGAATGTACACAAGCATGTAAGCATTTGAATGCTTAGTAAACCTAAGCGGGGTGGTATTCAATCCAGGATTGGTATGTGGGAGCTCTTCCTCGCCACCGTATTGCTCCTCTAATGCCCGCTTCATGTCTTCTTTTGTCACTCGTTCATCATCAAACTTGTACCATATATCTGAAAGTGCCGGGCGTATAAAGGCGTAGTAGTGTCCACCATGACCACCACCACTATGAACAAGTACGCTGTGTAGAGTATAGAGGTTACGCACCCTCCTGTCAGCTTCTGGAGAGAGGTATTTTCCATCATCCTTGTCAAGATCTAATTGTAATGGGAACTCATAGSGGTCATTTATCTTAACCATGMTDRCCGGCACAAAATCATATTCAAACCGCTTTAATTG ACTTGactcg                                                                                                                                                                                                                                                                                    ]


>consensus_2218#0 TTTTAAGTTATACTCTCTTTCTTCATTTTCTTTTCTCCATCTAATCTTAAGGTGTTCTGG TATGTCGTTTTCATCTAAATTGCAAATAATTTTTTCTCTGTCACTTTCACGAATGTACAC AAGCATGTAAGCATTTGAATGCTTAGTAAACCTAAGCGGGGTGGTATTCAATCCAGGATT GGTATGTGGGAGCTCTTCCTCGCCACCGTATTGCTCCTCTAATGCCCGCTTCATGTCTTC TTTTGTCACTCGTTCATCATCAAACTTGTACCATATATCTGAAAGTGCCGGGCGTATAAA GGCGTAGTAGTGTCCACCATGACCACCACCACTATGAACAAGTACGCTGTGTAGAGTATA GAGGTTACGCACCCTCCTGTCAGCTTCTGGAGAGAGGTATTTTCCATCATCCTTGTCAAG ATCTAATTGTAATGGGAACTCATAGCGGTCATTTATCTTAACCATGGTATCCCGCACAAA ATCATATTCAAACCGCTTTAATTGAACTTGCAGGACTGGAGGGAAGTCAATAAAAAGCAT CCCTTTCTTGGCATCCTGCAAACCATGTTTCTCAGACTGGTATTTATTATCACCTTCCAA TCTCTCTACTTCAACATACTTATCAAATGATGCATAAACATCTGAACAGCCCTTGACATC AAGTGCAAGATCATAGAATGATTCTTTCCTTGTAGATTTGTAGTCAACATTAATGCACTC AATATAATTCATATGATGACCTTCAAATAGCTGTTGAATTGTCCCTTCCACAGTAGTTCC CTTCATTTTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)