cluster # 2233

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Oryza sativa
cluster # 2233 cluster # 2233 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2233#0 length = 2481 sequences # 1

consensus_2233#1 length = 782 sequences # 1

consensusID : consensus_2233#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2481
fasta sequence

                              [CAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACAAGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCTCTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAGCAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTATGGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAGCTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAGCTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAGCAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCCTCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGTAGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACATGAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAACTCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACACCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAATTTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTATCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTTTTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTGAACAACTTATGTGACCTGGAAAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTTACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCTTCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGTCAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCGGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTATGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCATAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCTGAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGAAATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGATACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGATATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAACATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCCGGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTGTGGTGAGGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTACAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAATCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTCAAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTCAATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTGTGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATATGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTAATTAAGCACAGTAAGGAAATG]

[+] EMBL AK073088             [CAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACAAGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCTCTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAGCAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTATGGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAGCTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAGCTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAGCAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCCTCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGTAGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACATGAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAACTCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACACCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAATTTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTATCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTTTTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTGAACAACTTATGTGACCTGGAAAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTTACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCTTCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGTCAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCGGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTATGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCATAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCTGAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGAAATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGATACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGATATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAACATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCCGGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTGTGGTGAGGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTACAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAATCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTCAAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTCAATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTGTGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATATGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTAATTAAGCACAGTAAGGAAATG]




>consensus_2233#0
CAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACA
AGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCT
CTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAG
CAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTAT
GGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAG
CTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAG
CTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAG
CAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCC
TCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGT
AGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACAT
GAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAAC
TCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACA
CCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAAT
TTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTA
TCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTT
TTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTGAACAACTTATGTGACCTGGA
AAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTT
ACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCT
TCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGT
CAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAG
TTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGC
CCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAA
CCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCGGA
AAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCG
TCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCC
CCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTA
TGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCA
TAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCT
GAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGA
AATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGA
TACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGA
TATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAAC
ATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCC
GGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTG
TGGTGAGGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTA
CAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAA
TCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTC
AAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTC
AATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTG
TGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATA
TGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTA
ATTAAGCACAGTAAGGAAATG

consensusID : consensus_2233#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 782
fasta sequence

                              [CACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTATTGGAGCATGTGCTATGGTCCGTTACCACGGTGGATGGAGGACTCGTGAGACCTGCGAATCTTCGACCTGGGCCTTACCAGGTCCATGGAAGATATTCCAGGCACAATATCCCATTTTAACACCTCTATTACCGGAGTTTCCGACAAAATATATATCGGTGATATCCTCTCTCTGTGCCATTTAGAGAAGAGCTCTAACACGGGGGAGTAAACTCTCACCCGCGGTTATGAGCTTTTTACACTTCCCCCGGAGAAGACAAAACCCCAATGTGACACCGGGCGTTAGTGAGACTCTACTATACCACACCGGATCAGAGACACTCTCGAAGGTAAAAATATAGACTGTGGGAAACGGAACAGGTAAAAAAAATCCCCCGGGCTCTGGGGGCGG]

[+] EMBL AW155632             [CACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGAAAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTATTGGAGCATGTGCTATGGTCCGTTACCACGGTGGATGGAGGACTCGTGAGACCTGCGAATCTTCGACCTGGGCCTTACCAGGTCCATGGAAGATATTCCAGGCACAATATCCCATTTTAACACCTCTATTACCGGAGTTTCCGACAAAATATATATCGGTGATATCCTCTCTCTGTGCCATTTAGAGAAGAGCTCTAACACGGGGGAGTAAACTCTCACCCGCGGTTATGAGCTTTTTACACTTCCCCCGGAGAAGACAAAACCCCAATGTGACACCGGGCGTTAGTGAGACTCTACTATACCACACCGGATCAGAGACACTCTCGAAGGTAAAAATATAGACTGTGGGAAACGGAACAGGTAAAAAAAATCCCCCGGGCTCTGGGGGCGG]




>consensus_2233#1
CACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAGTTCCAATCGACTCA
GTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGCCCAAATGAACTTCT
TGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAACCTAATTATATCCT
CCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGAAAACATGAAACACT
TGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCGTCGTATGCGAAACT
TACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCCCCAATGGATCCAAA
GCTTCTCTTCACTGGTTTTCCTAGATCTTTATTGGAGCATGTGCTATGGTCCGTTACCAC
GGTGGATGGAGGACTCGTGAGACCTGCGAATCTTCGACCTGGGCCTTACCAGGTCCATGG
AAGATATTCCAGGCACAATATCCCATTTTAACACCTCTATTACCGGAGTTTCCGACAAAA
TATATATCGGTGATATCCTCTCTCTGTGCCATTTAGAGAAGAGCTCTAACACGGGGGAGT
AAACTCTCACCCGCGGTTATGAGCTTTTTACACTTCCCCCGGAGAAGACAAAACCCCAAT
GTGACACCGGGCGTTAGTGAGACTCTACTATACCACACCGGATCAGAGACACTCTCGAAG
GTAAAAATATAGACTGTGGGAAACGGAACAGGTAAAAAAAATCCCCCGGGCTCTGGGGGC
GG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2233#0      CAGCTTTAGCTTCTTCCTCATCACGCATGCTCAGCAACAAGCTACTCGTTGCAGACCACA 60
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      AGAGAGAGACGCCCTCCTGTCCTTCAAGCAAGGCATCACCAACGACAGTGTGGGCCTCCT 120
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CTCCTCATGGCGGAGAGGCCATGGCGATTGCTGCTCATGGGCAGGCATCACCTGTAGCAG 180
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CAAGACTGGCCATGTCGTCAAGCTCGATGTCAACAGCTTCCTTACTGATGATTCACCTAT 240
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      GGTTGGCCAGATAAGTCCATCTTTGCTGTCTCTCAACTACTTGCAGTACCTCGACCTCAG 300
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CTCAAACTTGCTGGCAGGGCCTAACGGCAGTGTCCCAGAGTTCCTAGGTTCAATGAACAG 360
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CTTGATACATCTTGACCTCTCCTACATCCCCTTCTCCGGTACACTGCCACCCCTGCTTAG 420
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CAACCTTACCAACTTGGAATATCTCGACCTCTCCTTCACATCATTTTCTGGTACACTTCC 480
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TCCTCAGCTGGGCAACCTTTCAAATTTACGGTATCTTGATGTTAGTGAGATGCAGAATGT 540
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      AGTGTATTCGACTGACCTCTCATGGTTAAGTCGTCTGCATTTGTTAGAGTATATTGACAT 600
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      GAGCAATACTATTCTCAGCAAAATAACGAATTTGCCTGCCGTGCTCAACAAGATCCCAAC 660
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TCTAAAGCATGTCCTCCTTTTGAATTGTTCAATTCCAAGTGCAAACCAATCCATCACACA 720
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CCTAAACCTTACCCAGCTTGAGGAGCTTGATCTCTCTCTCAACTACTTTGGCCATCCAAT 780
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TTCATCATGCTGGTTTTGGAAAGTAACAAGCATCAAGTCGCTCCGCCTAGATGAAACCTA 840
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TCTCCATGGTCCCTTCCCTGACGAGCTAGGCGAAATGGTGTCGCTCCAACACCTAGATTT 900
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TTGTTTCAATGGAAATGCAGCCACAATGACTGTGGACTTGAACAACTTATGTGACCTGGA 960
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      AAGCATATACCTTGACAAGAGTCTCTCATCCGGGAACATAACAGATTTGATGGATAAGTT 1020
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      ACAGTGTTCCAGCAAATTGTATAGCTTGAGTTCTATAAGCAATAATATGATAGGAATGCT 1080
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TCCAAGTAGTATAGAGCACTTCACCAGCTTAAATCACATTGATCTTACTAACAACAGTGT 1140
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CAGTGGAGTCATGCCACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAG 1200
consensus_2233#1      --------------CACGAGGATTTCAGAACATGGCTAATTTGGAGTACCTACATCTCAG 46
                                    **********************************************

consensus_2233#0      TTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGC 1260
consensus_2233#1      TTCCAATCGACTCAGTGGCCAGATGCCCTTGTTACCGACAAGCCTCAAGATATTGCATGC 106
                      ************************************************************

consensus_2233#0      CCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAA 1320
consensus_2233#1      CCAAATGAACTTCTTGTCAGGGCATCTCCCGTTGGAATTTAGAGCCCCAAATCTTGAAAA 166
                      ************************************************************

consensus_2233#0      CCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCGGA 1380
consensus_2233#1      CCTAATTATATCCTCCAATTACATTACTGGCCAAGTTCCTGGATCTATTTGTGAGTCAGA 226
                      ********************************************************* **

consensus_2233#0      AAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCG 1440
consensus_2233#1      AAACATGAAACACTTGGATTTGTCAAACAATTTATTTGAGGGAGAAGTACCTCACTGTCG 286
                      ************************************************************

consensus_2233#0      TCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCC 1500
consensus_2233#1      TCGTATGCGAAACTTACGTTTCCTGCTCTTAAGTAACAACAGCTTCTCTGGAAAGTTTCC 346
                      ************************************************************

consensus_2233#0      CCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTCATGGAACATGTTCTA 1560
consensus_2233#1      CCAATGGATCCAAAGCTTCTCTTCACTGGTTTTCCTAGATCTTTATTGGAGCATGTGCTA 406
                      ********************************************  **** ***** ***

consensus_2233#0      TGGTTCGTTACCAAGGTGGATTGGAGACTTGGTGACCTTGCGTATTCTGCACCTGGGTCA 1620
consensus_2233#1      TGGTCCGTTACCACGGTGGATGGAGGACTCGTGAGACCTGCGAATCTTCGACCTGGGCCT 466
                      **** ******** ******* *  **** *     * **** **  *  ******* * 

consensus_2233#0      TAACATGTTCAATGGAGATATTCCAGTCAACATCACACATCTTACACAACTTCAATACCT 1680
consensus_2233#1      TACCAGGTCCATGGAAGATATTCCAGGCACAATATCCCATTTTA-ACACCTCTATTACCG 525
                      ** ** ** **  * *********** **  **  * *** *** *** **  * **** 

consensus_2233#0      GAATTTAGCAGACAATAATATATCAGGTTTAATTCCTCTATCTTTGTCACATTTTAATGA 1740
consensus_2233#1      GAGTTT--CCGACAA-AATATATATCGGTGATATCCTCTCTCTGTGCCA---TTTAGAGA 579
                      ** ***  * ***** *******   * * *  ****** *** ** **   ****  **

consensus_2233#0      AATGACTCTAAAAGCTGTGGGTGATTCAATCTCGACCCTGGCATTTGATGAGTCATTTGA 1800
consensus_2233#1      AG-AGCTCTAACA----CGGGGGAGTAAACTCTCACCC--GCGGTT-ATGAGCTTTTT-- 629
                      *    ****** *     *** ** * **     ****  **  ** *****   ***  

consensus_2233#0      TACATTTTCCCTCGGAATGAAGCATCAAATACTCAAGTATGGATCACATGGGGTCGTTGA 1860
consensus_2233#1      -ACACTTCCCCCGGAGAAGA-----CAAA-ACCCCAATGTG----ACACCGGG-CGTTAG 677
                       *** ** ***  *  * **     **** ** * * * **    ***  *** ****  

consensus_2233#0      TATGGTTGGAATCGACTTATCGCTCAATCGCATAACCGGTGGAATTCCAGAGGAAATAAC 1920
consensus_2233#1      TGAGACTCTACTATACC--ACACCGGATCAGAGACACTCTCGAA----GGTAAAAATATA 731
                      *  *  *  * *  **    * *   ***  * *  *  * ***     *   *****  

consensus_2233#0      ATCTCTCGATAGATTGTCTAATTTAAATTTATCATGGAATCGCTTGAGTGGGAAAATTCC 1980
consensus_2233#1      GACTGT-GGGAAACGGAACAGGTAAAAAAAATCCCCCGGGCTCTGGGGGCGG-------- 782
                        ** * *  * *  *   *  * ***   ***       * ** * *  **        

consensus_2233#0      GGAGAACATTGGGTCTATGAAATCAATAGAATCACTCGACCTCTCAAGGAACTACCTTTG 2040
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TGGTGAGGTCCCATCAAGCTTGACAGATCTTACATATTTAAGCTACCTGGACCTATCGTA 2100
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      CAACAATCTTACTGGAAAAGTTCCATCCGGACGCCAACTTGACACCTTGTACTTAGAGAA 2160
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TCCATCCATGTACAATGGAAACATTGGTCTTTGTGGCCCTCCTCTTCAAAGGAATTGTTC 2220
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      AAGCAATGGTTATGCACAAGGGCATGGTGATCACAAAGGACAAGAGAAGGATTCCAATTC 2280
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      AATGTTCTTTTACTATGGTCTTGCATCAGGTTTTGTTGTTGGTTATTGGGTTGTGTTTTG 2340
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TGCTCTGCTATTCCACAAGTCATGGAGAGTCACTTATTTCTGCCTTGTGGACAAGGTATA 2400
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      TGACAAGTTATATGTGTATGTGGTCATTACTTGGACCAGATGGATGAACACTACAAATTA 2460
consensus_2233#1      ------------------------------------------------------------
                                                                                  

consensus_2233#0      ATTAAGCACAGTAAGGAAATG 2481
consensus_2233#1      ---------------------