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Oryza sativa
cluster # 2265 cluster # 2265       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2265#0 length = 1511 sequences # 2  

consensusID : consensus_2265#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1511
fasta sequence
                              [CAGTGCTAGCTCCATGGCGTTCTTCAGCAGCGGATCGCGGGCGCTGGTGGAAATCCTGACGGGATTGCAGAGTGTTGAACGACCTATGCCTGTTGATCATACCTTGTTTGAGTTTGGATCAATCCGTTACCATTTACAGGCTTCTATTACAGATTCAGAGAACATATACTTGTCAATATCAACACCATCTCTTTCTTATGAGGCTTCGCCATCCAGCGGCTTGCCTGAAATCACATTACAGGAGACAAGGAAAATGTATCACAAGTTTGCAGAGATCATCGAGCCTGCAAAAGAAGGATACACTTTGACACTGAGACTGAACTTCTCTGGCCTTACTCGACCGAAAGATCGCACCAAGGCGATCAACCAGATATCGTTGCTGCAATCCGTCATCCTTAGCTCGCAGCTCAAGGACATGCTGGCGAGCCTCGGCTCGTCCGGCACGATGAAGCTCGTGTACAACCAAAGGGACCCTTTCTTCGTCAGCAAAACGCCGGTGAAGATAAGCGCCATATTCCCCATGCGTTTCAGGGACGACACGGACCTGGCCATCGCGTCGTCGTTCTTCCAGGAGCTACAGGACCTCGGGAGCACGTCGTCCTTCTCCAGGGCGCCGCGGTGCAGCTGGTCGCCGATCCCGCCACCCGAGCTGCGCGGGGAGTACGTGCACCACCTCACCACCAACGGTGGCTTCGTGTCCTTCGACATCCTGGCGCGGCACGTGAAGGGGAGGAGGGCGGCTAGGACGGCGTGGATCCTGCTCAATTTCCAGTCCTACGTGAAATACCATATCAAGTGCACCCGAAGCTACATCCAGAGCAGGATGAGAAAGCGTCTGGAGATCATGACAGAGGTGATCGATGACGCGAAGTTCAGAGGAAACGATGAGAGCAGCAAGAAGCTGCAAGTGAGGAAGAGAAGCAAGAGAAGATCAATCAAATTCGCGAGAGCCAAAAAGCTCCAAAAGGGTTTCAAAGCTGTCATCGACAAGATCAAGCGGCTGCGGCTGAGGATCAGAGTGAAAGGCCTGGACCGGTTCAGGAGGCACTGCCAGTGCTTCCCAGTGCTCAAACTGACCATGGCACAGAGGAAGGAGCAGAAGTACCAGAAGCTGGAGTGAATCCTAATCAACTTTACGACTAATCACTTTTTTTTTTCACAGCACAGGCACAAGCGTGGTGATACATGCATGCTGACTCTTATCCTTTTTCCATACTGATCAAGTATACAAATCTGGTGAGTGATGAACATCCATTCAGATGGAGGGCACTACCATAGAAAAAGGCTAACAGGAGGACAGACAGTACACGGTTATTTAAAAACCGTTACATATATCTAAAAAATATCATAGACGACTATATTAGGAATTGTCTATGATAAAAAGCATCTAGTGTGTTTTTTTTCTTTTGAAAAGCACGAATGTGTTTTTTGTTATTTTCACTTGTGGCCAATCGTGCATTGGATTGTGGAAAACATGCATTTTCACTTGACGTACGTCAGGCAGTGACAAT]

[+] EMBL AK071791             [CAGTGCTAGCTCCATGGCGTTCTTCAGCAGCGGATCGCGGGCGCTGGTGGAAATCCTGACGGGATTGCAGAGTGTTGAACGACCTATGCCTGTTGATCATACCTTGTTTGAGTTTGGATCAATCCGTTACCATTTACAGGCTTCTATTACAGATTCAGAGAACATATACTTGTCAATATCAACACCATCTCTTTCTTATGAGGCTTCGCCATCCAGCGGCTTGCCTGAAATCACATTACAGGAGACAAGGAAAATGTATCACAAGTTTGCAGAGATCATCGAGCCTGCAAAAGAAGGATACACTTTGACACTGAGACTGAACTTCTCTGGCCTTACTCGACCGAAAGATCGCACCAAGGCGATCAACCAGATATCGTTGCTGCAATCCGTCATCCTTAGCTCGCAGCTCAAGGACATGCTGGCGAGCCTCGGCTCGTCCGGCACGATGAAGCTCGTGTACAACCAAAGGGACCCTTTCTTCGTCAGCAAAACGCCGGTGAAGATAAGCGCCATATTCCCCATGCGTTTCAGGGACGACACGGACCTGGCCATCGCGTCGTCGTTCTTCCAGGAGCTACAGGACCTCGGGAGCACGTCGTCCTTCTCCAGGGCGCCGCGGTGCAGCTGGTCGCCGATCCCGCCACCCGAGCTGCGCGGGGAGTACGTGCACCACCTCACCACCAACGGTGGCTTCGTGTCCTTCGACATCCTGGCGCGGCACGTGAAGGGGAGGAGGGCGGCTAGGACGGCGTGGATCCTGCTCAATTTCCAGTCCTACGTGAAATACCATATCAAGTGCACCCGAAGCTACATCCAGAGCAGGATGAGAAAGCGTCTGGAGATCATGACAGAGGTGATCGATGACGCGAAGTTCAGAGGAAACGATGAGAGCAGCAAGAAGCTGCAAGTGAGGAAGAGAAGCAAGAGAAGATCAATCAAATTCGCGAGAGCCAAAAAGCTCCAAAAGGGTTTCAAAGCTGTCATCGACAAGATCAAGCGGCTGCGGCTGAGGATCAGAGTGAAAGGCCTGGACCGGTTCAGGAGGCACTGCCAGTGCTTCCCAGTGCTCAAACTGACCATGGCACAGAGGAAGGAGCAGAAGTACCAGAAGCTGGAGTGAATCCTAATCAACTTTACGACTAATCACTTTTTTTTTTCACAGCACAGGCACAAGCGTGGTGATACATGCATGCTGACTCTTATCCTTTTTCCATACTGATCAAGTATACAAATCTGGTGAGTGATGAACATCCATTCAGATGGAGGGCACTACCATAGAAAAAGGCTAACAGGAGGACAGACAGTACACGGTTATTTAAAAACCGTTACATATATCTAAAAAATATCATAGACGACTATATTAGGAATTGTCTATGATAAAAAGCATCTAGTGTGTTTTTTTTCTTTTGAAAAGCACGAATGTGTTTTTTGTTATTTTCACTTGTGGCCAATCGTGCATTGGATTGTGGAAAACATGCATTTTCACTTGACGTACGTCAGGCAGTGACAAT]
[+] EMBL AA749833             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGATGGAGGGCACTACCATAGAAAAAGGCTAACAGGAGGACAGACAGTACACGGTTATTTAAAAACCGTTACATATATCTAAAAAATATCATAGACGACTATACTAGGAATTGTCTATGATAAAAAGCATCTAGTGTGTTT                                                                                                                 ]


>consensus_2265#0 CAGTGCTAGCTCCATGGCGTTCTTCAGCAGCGGATCGCGGGCGCTGGTGGAAATCCTGAC GGGATTGCAGAGTGTTGAACGACCTATGCCTGTTGATCATACCTTGTTTGAGTTTGGATC AATCCGTTACCATTTACAGGCTTCTATTACAGATTCAGAGAACATATACTTGTCAATATC AACACCATCTCTTTCTTATGAGGCTTCGCCATCCAGCGGCTTGCCTGAAATCACATTACA GGAGACAAGGAAAATGTATCACAAGTTTGCAGAGATCATCGAGCCTGCAAAAGAAGGATA CACTTTGACACTGAGACTGAACTTCTCTGGCCTTACTCGACCGAAAGATCGCACCAAGGC GATCAACCAGATATCGTTGCTGCAATCCGTCATCCTTAGCTCGCAGCTCAAGGACATGCT GGCGAGCCTCGGCTCGTCCGGCACGATGAAGCTCGTGTACAACCAAAGGGACCCTTTCTT CGTCAGCAAAACGCCGGTGAAGATAAGCGCCATATTCCCCATGCGTTTCAGGGACGACAC GGACCTGGCCATCGCGTCGTCGTTCTTCCAGGAGCTACAGGACCTCGGGAGCACGTCGTC CTTCTCCAGGGCGCCGCGGTGCAGCTGGTCGCCGATCCCGCCACCCGAGCTGCGCGGGGA GTACGTGCACCACCTCACCACCAACGGTGGCTTCGTGTCCTTCGACATCCTGGCGCGGCA CGTGAAGGGGAGGAGGGCGGCTAGGACGGCGTGGATCCTGCTCAATTTCCAGTCCTACGT GAAATACCATATCAAGTGCACCCGAAGCTACATCCAGAGCAGGATGAGAAAGCGTCTGGA GATCATGACAGAGGTGATCGATGACGCGAAGTTCAGAGGAAACGATGAGAGCAGCAAGAA GCTGCAAGTGAGGAAGAGAAGCAAGAGAAGATCAATCAAATTCGCGAGAGCCAAAAAGCT CCAAAAGGGTTTCAAAGCTGTCATCGACAAGATCAAGCGGCTGCGGCTGAGGATCAGAGT GAAAGGCCTGGACCGGTTCAGGAGGCACTGCCAGTGCTTCCCAGTGCTCAAACTGACCAT GGCACAGAGGAAGGAGCAGAAGTACCAGAAGCTGGAGTGAATCCTAATCAACTTTACGAC TAATCACTTTTTTTTTTCACAGCACAGGCACAAGCGTGGTGATACATGCATGCTGACTCT TATCCTTTTTCCATACTGATCAAGTATACAAATCTGGTGAGTGATGAACATCCATTCAGA TGGAGGGCACTACCATAGAAAAAGGCTAACAGGAGGACAGACAGTACACGGTTATTTAAA AACCGTTACATATATCTAAAAAATATCATAGACGACTATATTAGGAATTGTCTATGATAA AAAGCATCTAGTGTGTTTTTTTTCTTTTGAAAAGCACGAATGTGTTTTTTGTTATTTTCA CTTGTGGCCAATCGTGCATTGGATTGTGGAAAACATGCATTTTCACTTGACGTACGTCAG GCAGTGACAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)