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Oryza sativa
cluster # 2282 cluster # 2282       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2282#0 length = 1349 sequences # 2  

consensusID : consensus_2282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1349
fasta sequence
                              [CGCTCTCGAAGCCGTACGCTGTTCAAAGCGAAGCGAATCGAATAATCGATCATATCCATTGCCTAATTCGTAGCACGTCGATGGATCAGCTGGTCGTCGGCGTGGCGCGGCCGTCGAGCCCCTCGGCGGCGGCGCACGTCGCGTACAAGATCCCGGCCGGCGACGGGCCGTACGCTCGGGCCAAGCACTACCAGCTGGTGGAGAAGGATCTTGACGCGTCCATCGCGTGGTTCTGGAAGGCGATCAACTCCGGCGACAAGGTGGACAGCGCGCTCAAGGACATGGCCGTCGTCATGAAGCAGCGTGGCTACCACGCCGACGCCATCGACGCCATCAAGTCGCTCCGCCACCTCTGCCCCAAGCAGTCTCAGGACTCCCTCGACAACATCCTCCTCGACCTCTACAAGGCGAGCGGGAGGACGAAGGAGGAGATCGAGCTGCTGAAGCAGAAGCTGCGGAAGATCTACCTGGGCGAGGCGTTCCACGGGAAGACGACGAAGCGGGCGAGGTCGCACGGGCGGAAGATCCACGTCTCCGTGAAGCAGGAGACGTCGCGGGTGCTGGGCAACCTCGCGTGGGCGTACATGCAGCAGGGGAATTTCATGGCGGCGGAGGTGGTGTACCGCAAGGCGCAGATGGTCGACCCGGACGCCAACAAGGCCTGCAACCTCGCGCTCTGCCTCATCGAGCAGCGCCGCCCCGCCGACGCCGAGGCCGTCCTCGCCGGCGTGCTCGCCGGGAGGTACCACGCCCGCGACGACGACCACGGCGCCCCGCACACCGGCGGCAAGATCCTCGCCAAGGTGGAGGAGTTGATGGCCCGCATCACCGGCGAGGTCGACGGCCGGAGCAACAGCAGCGGCGGCAGCAGCAGCGACGACGACGACCGCGACGTCGAGGACGAGATGGTGGAGCTGCTAGACGTGGTGGTCCGGCAGTGGGCGGCGCCGTACAGGAGGAGCAACCGGAGGCTGCCGGTCTTCGAGGAGATCACTCCGGTCTGCAGGGAGCAGATGGCAGCTTGCTAGAAGATGGTAATTAATTAAGAGTAGTAGCAAATTGTTAATTAAATTAGCAGGTCCATCATCTAGTGTTGGGTAGATATATAGAATTTCATGCACCTATCCGACGTGTCAACGGCTTCAACTTTATAGGGAGAACTAGCTGCAGGTGCATGAAGCTAAGCATGCATGGATGTTTTTTTTTCTTGTGAGTGTGTGTGTGTGAAATTAATAGTGTGAGATAGAGAAGTATAATGTGTGTGTGACCAGTTGCATGTTTTGTACTCTGGTTGTGTTGTTGTGTACTTATGTAGAGTTGATAAGTGCATGGCTTGGTGAAGGATATAA]

[+] EMBL AK102116             [CGCTCTCGAAGCCGTACGCTGTTCAAAGCGAAGCGAATCGAATAATCGATCATATCCATTGCCTAATTCGTAGCACGTCGATGGATCAGCTGGTCGTCGGCGTGGCGCGGCCGTCGAGCCCCTCGGCGGCGGCGCACGTCGCGTACAAGATCCCGGCCGGCGACGGGCCGTACGCTCGGGCCAAGCACTACCAGCTGGTGGAGAAGGATCTTGACGCGTCCATCGCGTGGTTCTGGAAGGCGATCAACTCCGGCGACAAGGTGGACAGCGCGCTCAAGGACATGGCCGTCGTCATGAAGCAGCGTGGCTACCACGCCGACGCCATCGACGCCATCAAGTCGCTCCGCCACCTCTGCCCCAAGCAGTCTCAGGACTCCCTCGACAACATCCTCCTCGACCTCTACAAGGCGAGCGGGAGGACGAAGGAGGAGATCGAGCTGCTGAAGCAGAAGCTGCGGAAGATCTACCTGGGCGAGGCGTTCCACGGGAAGACGACGAAGCGGGCGAGGTCGCACGGGCGGAAGATCCACGTCTCCGTGAAGCAGGAGACGTCGCGGGTGCTGGGCAACCTCGCGTGGGCGTACATGCAGCAGGGGAATTTCATGGCGGCGGAGGTGGTGTACCGCAAGGCGCAGATGGTCGACCCGGACGCCAACAAGGCCTGCAACCTCGCGCTCTGCCTCATCGAGCAGCGCCGCCCCGCCGACGCCGAGGCCGTCCTCGCCGGCGTGCTCGCCGGGAGGTACCACGCCCGCGACGACGACCACGGCGCCCCGCACACCGGCGGCAAGATCCTCGCCAAGGTGGAGGAGTTGATGGCCCGCATCACCGGCGAGGTCGACGGCCGGAGCAACAGCAGCGGCGGCAGCAGCAGCGACGACGACGACCGCGACGTCGAGGACGAGATGGTGGAGCTGCTAGACGTGGTGGTCCGGCAGTGGGCGGCGCCGTACAGGAGGAGCAACCGGAGGCTGCCGGTCTTCGAGGAGATCACTCCGGTCTGCAGGGAGCAGATGGCAGCTTGCTAGAAGATGGTAATTAATTAAGAGTAGTAGCAAATTGTTAATTAAATTAGCAGGTCCATCATCTAGTGTTGGGTAGATATATAGAATTTCATGCACCTATCCGACGTGTCAACGGCTTCAACTTTATAGGGAGAACTAGCTGCAGGTGCATGAAGCTAAGCATGCATGGATGTTTTTTTTTCTTGTGAGTGTGTGTGTGTGAAATTAATAGTGTGAGATAGAGAAGTATAATGTGTGTGTGACCAGTTGCATGTTTTGTACTCTGGTTGTGTTGTTGTGTACTTATGTAGAGTTGATAAGTGCA                    ]
[+] EMBL AK063721             [                                                                                                                                                                                                                                                             CGACAAGGTGGACAGCGCGCTCAAGGACATGGCCGTCGTCATGAAGCAGCGTGGCTACCACGCCGACGCCATCGACGCCATCAAGTCGCTCCGCCACCTCTGCCCCAAGCAGTCTCAGGACTCCCTCGACAACATCCTCCTCGACCTCTACAAGGCGAGCGGGAGGACGAAGGAGGAGATCGAGCTGCTGAAGCAGAAGCTGCGGAAGATCTACCTGGGCGAGGCGTTCCACGGGAAGACGACGAAGCGGGCGAGGTCGCACGGGCGGAAGATCCACGTCTCCGTGAAGCAGGAGACGTCGCGGGTGCTGGGCAACCTCGCGTGGGCGTACATGCAGCAGGGGAATTTCATGGCGGCGGAGGTGGTGTACCGCAAGGCGCAGATGGTCGACCCGGACGCCAACAAGGCCTGCAACCTCGCGCTCTGCCTCATCGAGCAGCGCCGCCCCGCCGACGCCGAGGCCGTCCTCGCCGGCGTGCTCGCCGGGAGGTACCACGCCCGCGACGACGACCACGGCGCCCCGCACACCGGCGGCAAGATCCTCGCCAAGGTGGAGGAGTTGATGGCCCGCATCACCGGCGAGGTCGACGGCCGGAGCAACAGCAGCGGCGGCAGCAGCAGCGACGACGACGACCGCGACGTCGAGGACGAGATGGTGGAGCTGCTAGACGTGGTGGTCCGGCAGTGGGCGGCGCCGTACAGGAGGAGCAACCGGAGGCTGCCGGTCTTCGAGGAGATCACTCCGGTCTGCAGGGAGCAGATGGCAGCTTGCTAGAAGATGGTAATTAATTAAGAGTAGTAGCAAATTGTTAATTAAATTAGCAGGTCCATCATCTAGTGTTGGGTAGATATATAGAATTTCATGCACCTATCCGACGTGTCAACGGCTTCAACTTTATAGGGAGAACTAGCTGCAGGTGCATGAAGCTAAGCATGCATGGATGTTTTTTTTTCTTGTGAGTGTGTGTGTGTGAAATTAATAGTGTGAGATAGAGAAGTATAATGTGTGTGTGACCAGTTGCATGTTTTGTACTCTGGTTGTGTTGTTGTGTACTTATGTAGAGTTGATAAGTGCATGGCTTGGTGAAGGATATAA]


>consensus_2282#0 CGCTCTCGAAGCCGTACGCTGTTCAAAGCGAAGCGAATCGAATAATCGATCATATCCATT GCCTAATTCGTAGCACGTCGATGGATCAGCTGGTCGTCGGCGTGGCGCGGCCGTCGAGCC CCTCGGCGGCGGCGCACGTCGCGTACAAGATCCCGGCCGGCGACGGGCCGTACGCTCGGG CCAAGCACTACCAGCTGGTGGAGAAGGATCTTGACGCGTCCATCGCGTGGTTCTGGAAGG CGATCAACTCCGGCGACAAGGTGGACAGCGCGCTCAAGGACATGGCCGTCGTCATGAAGC AGCGTGGCTACCACGCCGACGCCATCGACGCCATCAAGTCGCTCCGCCACCTCTGCCCCA AGCAGTCTCAGGACTCCCTCGACAACATCCTCCTCGACCTCTACAAGGCGAGCGGGAGGA CGAAGGAGGAGATCGAGCTGCTGAAGCAGAAGCTGCGGAAGATCTACCTGGGCGAGGCGT TCCACGGGAAGACGACGAAGCGGGCGAGGTCGCACGGGCGGAAGATCCACGTCTCCGTGA AGCAGGAGACGTCGCGGGTGCTGGGCAACCTCGCGTGGGCGTACATGCAGCAGGGGAATT TCATGGCGGCGGAGGTGGTGTACCGCAAGGCGCAGATGGTCGACCCGGACGCCAACAAGG CCTGCAACCTCGCGCTCTGCCTCATCGAGCAGCGCCGCCCCGCCGACGCCGAGGCCGTCC TCGCCGGCGTGCTCGCCGGGAGGTACCACGCCCGCGACGACGACCACGGCGCCCCGCACA CCGGCGGCAAGATCCTCGCCAAGGTGGAGGAGTTGATGGCCCGCATCACCGGCGAGGTCG ACGGCCGGAGCAACAGCAGCGGCGGCAGCAGCAGCGACGACGACGACCGCGACGTCGAGG ACGAGATGGTGGAGCTGCTAGACGTGGTGGTCCGGCAGTGGGCGGCGCCGTACAGGAGGA GCAACCGGAGGCTGCCGGTCTTCGAGGAGATCACTCCGGTCTGCAGGGAGCAGATGGCAG CTTGCTAGAAGATGGTAATTAATTAAGAGTAGTAGCAAATTGTTAATTAAATTAGCAGGT CCATCATCTAGTGTTGGGTAGATATATAGAATTTCATGCACCTATCCGACGTGTCAACGG CTTCAACTTTATAGGGAGAACTAGCTGCAGGTGCATGAAGCTAAGCATGCATGGATGTTT TTTTTTCTTGTGAGTGTGTGTGTGTGAAATTAATAGTGTGAGATAGAGAAGTATAATGTG TGTGTGACCAGTTGCATGTTTTGTACTCTGGTTGTGTTGTTGTGTACTTATGTAGAGTTG ATAAGTGCATGGCTTGGTGAAGGATATAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)