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Oryza sativa
cluster # 2290 cluster # 2290       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2290#0 length = 2549 sequences # 2  

consensusID : consensus_2290#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2549
fasta sequence
                              [CGCCGCCGCCGTCGCGGCGGCCGCCCGCGCCTCGCCGACGTCGGCGGCGGCGCTCGCGCTCTTCAAGTCGGTGCTGTCCGCGGACAAGGCGCTCTCGCCGCTCGCCGTGCTCCCGCACCTCGACGGCGCGCCGTCCTCGCTGCCCAACCTCCTGCTCACCGCCTCCGCCGCCGTGCGCCCCCACGCCACCTCCCTCCGCCTCTACTCGCGGATGAAGTCCCTATCCCTCCCCATCTCGACCGCCTCGCTCCACCCGCTCCTCTCCGCCCTCCCCTCCGCCCCGACCTTCGCCCTCTTCGCCGACATGTTCCGCCTCCGCCTCCCGCTCTGCACCACCACCTTCAACATCATGCTCCGCCACCTCTGCTCCGCCGGGAAGCCCGCCCGCGCGCTCGAGCTCCTCCGCCAGATGCCCCGCCCGAACGCCGTCACCTACAACACCGTCATCGCCGGGTTCTGCTCCCGGGGCCGCGTCCAGGCGGCGCTGGATATTATGCGGGAGATGCGAGAACGCGGAGGAATCGCGCCCAACCAGTACACCTACGGCACGGTGATCTCTGGCTGGTGTAAGGTTGGCCGGGTCGATGAGGCAGTGAAGGTGTTCGACGAAATGCTGACCAAGGGAGAGGTTAAACCGGAAGCTGTGATGTACAACGCCTTGATTGGTGGATACTGTGACCAGGGTAAGCTGGATACTGCGCTCCTTTACCGTGATAGAATGGTGGAGAGAGGGGTCGCAATGACAGTCGCGACCTACAATTTACTCGTGCACGCCTTGTTCATGGATGGGCGTGGAACAGAGGCATATGAGTTGGTCGAGGAGATGGGTGGAAAGGGTCTTGCGCCGGATGTGTTCACGTACAATATATTGATAAACGGGCATTGCAAAGAGGGCAACGTGAAGAAAGCACTAGAGATTTTTGAGAATATGTCCAGGAGAGGGGTCCGTGCGACAGTAGTGACCTATACGGCATTGATATATGCCTTGTCTAAGAAGGGGCAAGTTCAGGGGACAGATAAGCTGTTTGATGAGGCTGTAAGGAGAGGCATTAGGCCTGACCTTGTCTTGTACAATGCTCTGATCAATAGTCACTCCACTTCTGGCAACATCGATCGAGCTTTCGAGATAATGGGTGAGATGGAGAAGAAAAGGATCGCACCAGATGATGTGACCTACAATACGCTAATGAGGGGGCTGTGTCTACTGGGACGTGTTGATGAAGCGCGCAAGCTCATTGATGAGATGACAGAGAGGGGAATCCAGCCAGACCTTGTCACTTATAACACGCTGATCAGTGGCTACAGCATGAAGGGTGATGTCAAGGATGCTCTGAGGATTCGGAATGAGATGATGAATAAGGGGTTCAATCCAACGCTTTTGACATATAATGCGCTGATACAGGGGCTCTGTAAGAATGGCCAGGGAGATGACGCTGAGAACATGGTGAAGGAGATGGTGGAGAATGGCATCACCCCTGATGACAGCACATACATCTCACTGATTGAGGGTCTTACCACTGAAGACGAGCGTGCCATTGATGATGAGCGACTGGCTGCAGCAGATGCTGCGAAAGTATGAGCCATCTATTAAGCAGAGAGGCATTTTGGGCAGATAGAGCAGATCAGTTCAAATACTTCATGCCTTCAAAAAAGGAGGAAAATCAAATGCTTGAACGACTTGCTCAACCTCTGCCATGTGTGCAATATCATGTTAAATTGCCTGGCCATTTTCTGACTGGAGTGCAACATAATCATTTTGAAGCCTGGCGTATCTGGCGATGAGGATCAGGTGGCACTCACATTTTGTCTCCCCGTTGTTCTTGCCCAAGTTGTAGACGTCCATCTTTTCTCAGTTCATCTGTGGACGTATGCCTGTAATTTTGACAAGAAGGAAACACATGCTGTTTTGAAGATTCCCGACAACAAACATTCCAATCTAGAACTCTCAAGATTCGGCTTGGCTATATCAGAACTCACTCTGTTTATTTGGTTTTCTCATTGTCATACTATCTTTATTAATCTGATAACAATAAGATTAGACAGCTTGTGACTTGTCACTAACGGCTAAGGCTAAGCATAACGCATCTTAATGATCTGTCCTGCCCAGCAAAGTGGAGACTGGATAAAGTTAATCACCCTGGCCAGCTTACTTGTCATTGACAGCATCACAGTGTCTGCACTTTGTGTGGTCCTGGTTTCCATTACTACTGCAAGTATCATCTGAAGAGGTAGCACTGAAGATCATTTTTATTGCATAGAGTAAAGAGGGCCTTTGTTGGCATGTGCTTAGTTACTTCCTGAGGTGCTTTTCATCATTGTCGATTTTGATGTTTCATTGTCATACTCTATGTTGGTAATTATTTATGTATCATGATGCATATCATCACTGATTCACTGTCACAGTGAACCACAGAGCGATAGGTTTATCTAGCTTGTCCTTTTCTTTGTAAGAGTGCAGAGTGTTTGGTCATTGAAACTGTACAGCAGAGACCGTTCTGTTCCAAAACCATAACAATGTTCCTCTTGTTAATTTATACTATTGGTTAGTC]

[+] EMBL AK072552             [CGCCGCCGCCGTCGCGGCGGCCGCCCGCGCCTCGCCGACGTCGGCGGCGGCGCTCGCGCTCTTCAAGTCGGTGCTGTCCGCGGACAAGGCGCTCTCGCCGCTCGCCGTGCTCCCGCACCTCGACGGCGCGCCGTCCTCGCTGCCCAACCTCCTGCTCACCGCCTCCGCCGCCGTGCGCCCCCACGCCACCTCCCTCCGCCTCTACTCGCGGATGAAGTCCCTATCCCTCCCCATCTCGACCGCCTCGCTCCACCCGCTCCTCTCCGCCCTCCCCTCCGCCCCGACCTTCGCCCTCTTCGCCGACATGTTCCGCCTCCGCCTCCCGCTCTGCACCACCACCTTCAACATCATGCTCCGCCACCTCTGCTCCGCCGGGAAGCCCGCCCGCGCGCTCGAGCTCCTCCGCCAGATGCCCCGCCCGAACGCCGTCACCTACAACACCGTCATCGCCGGGTTCTGCTCCCGGGGCCGCGTCCAGGCGGCGCTGGATATTATGCGGGAGATGCGAGAACGCGGAGGAATCGCGCCCAACCAGTACACCTACGGCACGGTGATCTCTGGCTGGTGTAAGGTTGGCCGGGTCGATGAGGCAGTGAAGGTGTTCGACGAAATGCTGACCAAGGGAGAGGTTAAACCGGAAGCTGTGATGTACAACGCCTTGATTGGTGGATACTGTGACCAGGGTAAGCTGGATACTGCGCTCCTTTACCGTGATAGAATGGTGGAGAGAGGGGTCGCAATGACAGTCGCGACCTACAATTTACTCGTGCACGCCTTGTTCATGGATGGGCGTGGAACAGAGGCATATGAGTTGGTCGAGGAGATGGGTGGAAAGGGTCTTGCGCCGGATGTGTTCACGTACAATATATTGATAAACGGGCATTGCAAAGAGGGCAACGTGAAGAAAGCACTAGAGATTTTTGAGAATATGTCCAGGAGAGGGGTCCGTGCGACAGTAGTGACCTATACGGCATTGATATATGCCTTGTCTAAGAAGGGGCAAGTTCAGGGGACAGATAAGCTGTTTGATGAGGCTGTAAGGAGAGGCATTAGGCCTGACCTTGTCTTGTACAATGCTCTGATCAATAGTCACTCCACTTCTGGCAACATCGATCGAGCTTTCGAGATAATGGGTGAGATGGAGAAGAAAAGGATCGCACCAGATGATGTGACCTACAATACGCTAATGAGGGGGCTGTGTCTACTGGGACGTGTTGATGAAGCGCGCAAGCTCATTGATGAGATGACAGAGAGGGGAATCCAGCCAGACCTTGTCACTTATAACACGCTGATCAGTGGCTACAGCATGAAGGGTGATGTCAAGGATGCTCTGAGGATTCGGAATGAGATGATGAATAAGGGGTTCAATCCAACGCTTTTGACATATAATGCGCTGATACAGGGGCTCTGTAAGAATGGCCAGGGAGATGACGCTGAGAACATGGTGAAGGAGATGGTGGAGAATGGCATCACCCCTGATGACAGCACATACATCTCACTGATTGAGGGTCTTACCACTGAAGACGAGCGTGCCATTGATGATGAGCGACTGGCTGCAGCAGATGCTGCGAAAGTATGAGCCATCTATTAAGCAGAGAGGCATTTTGGGCAGATAGAGCAGATCAGTTCAAATACTTCATGCCTTCAAAAAAGGAGGAAAATCAAATGCTTGAACGACTTGCTCAACCTCTGCCATGTGTGCAATATCATGTTAAATTGCCTGGCCATTTTCTGACTGGAGTGCAACATAATCATTTTGAAGCCTGGCGTATCTGGCGATGAGGATCAGGTGGCACTCACATTTTGTCTCCCCGTTGTTCTTGCCCAAGTTGTAGACGTCCATCTTTTCTCAGTTCATCTGTGGACGTATGCCTGTAATTTTGACAAGAAGGAAACACATGCTGTTTTGAAGATTCCCGACAACAAACATTCCAATCTAGAACTCTCAAGATTCGGCTTGGCTATATCAGAACTCACTCTGTTTATTTGGTTTTCTCATTGTCATACTATCTTTATTAATCTGATAACAATAAGATTAGACAGCTTGTGACTTGTCACTAACGGCTAAGGCTAAGCATAACGCATCTTAATGATCTGTCCTGCCCAGCAAAGTGGAGACTGGATAAAGTTAATCACCCTGGCCAGCTTACTTGTCATTGACAGCATCACAGTGTCTGCACTTTGTGTGGTCCTGGTTTCCATTACTACTGCAAGTATCATCTGAAGAGGTAGCACTGAAGATCATTTTTATTGCATAGAGTAAAGAGGGCCTTTGTTGGCATGTGCTTAGTTACTTCCTGAGGTGCTTTTCATCATTGTCGATTTTGATGTTTCATTGTCATACTCTATGTTGGTAATTATTTATGTATCATGATGCATATCATCACTGATTCACTGTCACAGTGAACCACAGAGCGATAGGTTTATCTAGCTTGTCCTTTTCTTTGTAAGAGTGCAGAGTGTTTGGTCATTGAAACTGTACAGCAGAGACCGTTCTGTTCCAAAACCATAACAATGTTCCTCTTGTTAATTTATACTATTGGTTAGTC]
[+] EMBL AK063874             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTTAAATTGCCTGGCCATTTTCTGACTGGAGTGCAACATAATCATTTTGAAGCCTGGCGTATCTGGCGATGAGGATCAGGTGGCACTCACATTTTGTCTCCCCGTTGTTCTTGCCCAAGTTGTAGACGTCCATCTTTTCTCAGTTCATCTGTGGACGTATGCCTGTAATTTTGACAAGAAGGAAACACATGCTGTTTTGAAGATTCCCGACAACAAACATTCCAATCTAGAACTCTCAAGATTCGGCTTGGCTATATCAGAACTCACTCTGTTTATTTGGTTTTCTCATTGTCATACTATCTTTATTAATCTGATAACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_2290#0 CGCCGCCGCCGTCGCGGCGGCCGCCCGCGCCTCGCCGACGTCGGCGGCGGCGCTCGCGCT CTTCAAGTCGGTGCTGTCCGCGGACAAGGCGCTCTCGCCGCTCGCCGTGCTCCCGCACCT CGACGGCGCGCCGTCCTCGCTGCCCAACCTCCTGCTCACCGCCTCCGCCGCCGTGCGCCC CCACGCCACCTCCCTCCGCCTCTACTCGCGGATGAAGTCCCTATCCCTCCCCATCTCGAC CGCCTCGCTCCACCCGCTCCTCTCCGCCCTCCCCTCCGCCCCGACCTTCGCCCTCTTCGC CGACATGTTCCGCCTCCGCCTCCCGCTCTGCACCACCACCTTCAACATCATGCTCCGCCA CCTCTGCTCCGCCGGGAAGCCCGCCCGCGCGCTCGAGCTCCTCCGCCAGATGCCCCGCCC GAACGCCGTCACCTACAACACCGTCATCGCCGGGTTCTGCTCCCGGGGCCGCGTCCAGGC GGCGCTGGATATTATGCGGGAGATGCGAGAACGCGGAGGAATCGCGCCCAACCAGTACAC CTACGGCACGGTGATCTCTGGCTGGTGTAAGGTTGGCCGGGTCGATGAGGCAGTGAAGGT GTTCGACGAAATGCTGACCAAGGGAGAGGTTAAACCGGAAGCTGTGATGTACAACGCCTT GATTGGTGGATACTGTGACCAGGGTAAGCTGGATACTGCGCTCCTTTACCGTGATAGAAT GGTGGAGAGAGGGGTCGCAATGACAGTCGCGACCTACAATTTACTCGTGCACGCCTTGTT CATGGATGGGCGTGGAACAGAGGCATATGAGTTGGTCGAGGAGATGGGTGGAAAGGGTCT TGCGCCGGATGTGTTCACGTACAATATATTGATAAACGGGCATTGCAAAGAGGGCAACGT GAAGAAAGCACTAGAGATTTTTGAGAATATGTCCAGGAGAGGGGTCCGTGCGACAGTAGT GACCTATACGGCATTGATATATGCCTTGTCTAAGAAGGGGCAAGTTCAGGGGACAGATAA GCTGTTTGATGAGGCTGTAAGGAGAGGCATTAGGCCTGACCTTGTCTTGTACAATGCTCT GATCAATAGTCACTCCACTTCTGGCAACATCGATCGAGCTTTCGAGATAATGGGTGAGAT GGAGAAGAAAAGGATCGCACCAGATGATGTGACCTACAATACGCTAATGAGGGGGCTGTG TCTACTGGGACGTGTTGATGAAGCGCGCAAGCTCATTGATGAGATGACAGAGAGGGGAAT CCAGCCAGACCTTGTCACTTATAACACGCTGATCAGTGGCTACAGCATGAAGGGTGATGT CAAGGATGCTCTGAGGATTCGGAATGAGATGATGAATAAGGGGTTCAATCCAACGCTTTT GACATATAATGCGCTGATACAGGGGCTCTGTAAGAATGGCCAGGGAGATGACGCTGAGAA CATGGTGAAGGAGATGGTGGAGAATGGCATCACCCCTGATGACAGCACATACATCTCACT GATTGAGGGTCTTACCACTGAAGACGAGCGTGCCATTGATGATGAGCGACTGGCTGCAGC AGATGCTGCGAAAGTATGAGCCATCTATTAAGCAGAGAGGCATTTTGGGCAGATAGAGCA GATCAGTTCAAATACTTCATGCCTTCAAAAAAGGAGGAAAATCAAATGCTTGAACGACTT GCTCAACCTCTGCCATGTGTGCAATATCATGTTAAATTGCCTGGCCATTTTCTGACTGGA GTGCAACATAATCATTTTGAAGCCTGGCGTATCTGGCGATGAGGATCAGGTGGCACTCAC ATTTTGTCTCCCCGTTGTTCTTGCCCAAGTTGTAGACGTCCATCTTTTCTCAGTTCATCT GTGGACGTATGCCTGTAATTTTGACAAGAAGGAAACACATGCTGTTTTGAAGATTCCCGA CAACAAACATTCCAATCTAGAACTCTCAAGATTCGGCTTGGCTATATCAGAACTCACTCT GTTTATTTGGTTTTCTCATTGTCATACTATCTTTATTAATCTGATAACAATAAGATTAGA CAGCTTGTGACTTGTCACTAACGGCTAAGGCTAAGCATAACGCATCTTAATGATCTGTCC TGCCCAGCAAAGTGGAGACTGGATAAAGTTAATCACCCTGGCCAGCTTACTTGTCATTGA CAGCATCACAGTGTCTGCACTTTGTGTGGTCCTGGTTTCCATTACTACTGCAAGTATCAT CTGAAGAGGTAGCACTGAAGATCATTTTTATTGCATAGAGTAAAGAGGGCCTTTGTTGGC ATGTGCTTAGTTACTTCCTGAGGTGCTTTTCATCATTGTCGATTTTGATGTTTCATTGTC ATACTCTATGTTGGTAATTATTTATGTATCATGATGCATATCATCACTGATTCACTGTCA CAGTGAACCACAGAGCGATAGGTTTATCTAGCTTGTCCTTTTCTTTGTAAGAGTGCAGAG TGTTTGGTCATTGAAACTGTACAGCAGAGACCGTTCTGTTCCAAAACCATAACAATGTTC CTCTTGTTAATTTATACTATTGGTTAGTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)