cluster # 230

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Oryza sativa
cluster # 230 cluster # 230 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_230#0 length = 725 sequences # 2

consensusID : consensus_230#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 725
fasta sequence

                              [AGATGAAAGAGAAACTTAAAAAACATGAAACAAATTCAATTAACACACCACTGAGGCCTTCTTCACCAGCATCTTGCAGATGCATGCCAAGAGCTTAAGACTGAGGCGGCATGAAATGAAGGGAGGCAACTGCTACAACGAGACAACAATGATAAGGGCTCCGGATACTGGGGCAGCTGTTGCGATGGCCGGCCGTGTCATGGCCGCAGAGCAGCAGCATGCAGAGGCCGATTGACACGAGGGGCAAATTAGTACTTTTCCATGTGATTTTTCTCTCAGTTCTCTCCGTAAATAATACTAAAATAATATGTTGAGTGTCAAGTAACTAAATACCATGTTTTCGCGGTCTCCTCAAACATATGCGTATTCTTTGTGTGTACTGTAGAACTTAAGAAATTATTTGTCCTTTTATTTTTCTTCTATTTTTTTTTCCTTCTCCTTCTCTCTTTTTGTCTCATTTCCTTCTCTTTTTCTTTCCTAGAAATTTATAATGTAAACACGAAAAATATATGGAATTTACAATATAACATGGTGGAATTATGTCATGAAATTAATGTTGAACATTTCAACTATTTCTTTTACCTAAAAATGCTACGTCATAAATACTTATAGTGCCTTTTACATTAAGGAAAGTGCGATTTAGCAATGAGTGGCANACCATACTTGAGACGCACGGAGATCCCCCCCATCTCGCTCATGTCTAGCGATAACGTGCCCGATTTACA]

[+] EMBL CA760663             [AGATGAAAGAGAAACTTAAAAAACATGAAACAAATTCAATTAACACACCACTGAGGCCTTCTTCACCAGCATCTTGCAGATGCATGCCAAGAGCTTAAGACTGAGGCGGCATGAAATGAAGGGAGGCAACTGCTACAACGAGACAACAATGATAAGGGCTCCGGATACTGGGGCAGCTGTTGCGATGGCCGGCCGTGTCATGGCCGCAGAGCAGCAGCATGCAGAGGCCGATTGACACGAGGGGCAAATTAGTACTTTTCCATGTGATTTTTCTCTCAGTTCTCTCCGTAAATAATACTAAAATAATATGTTGAGTGTCAAGTAACTAAATACCATGTTTTCGCGGTCTCCTCAAACATATGCGTATTCTTTGTGTGTACTGTAGAACTTAAGAAATTATTTGTCCTTTTATTTTTCTTCTATTTTTTTTTCCTTCTCCTTCTCTCTTTTTGTCTCATTTCCTTCTCTTTTTCTTTCCTAGAAATTTATAATGTAAACACGAAAAATATATGGAATTTACAATATAACATGGTGGAATTATGTCATGAAATTAATGTTGAACATTTCAACTATTTCTTTTACCTAAAAATGCTACGTCATAAATACTTATAGTGCCTTTTACATTAAGGAAAGTGCGATTTAGCAATGAGTGGCANACCATACTTGAGACGCACGGAGATCCCCCC                                       ]
[-] EMBL CA766828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGTCATGAAATTAATGTTGAACATTTCAACTATTTCTTTTACCTAAAAATGCTACGTCATAAATACTTATAGTGCCTTTTACATTAAGAAAAGTGCGATTTAGCAATGAGTGGCAAACCATACTTGAGACGCACGGAGATCCCATTCATCTCGCTCATGTCTAGCGATAACGTGCCCGATTTACA]




>consensus_230#0
AGATGAAAGAGAAACTTAAAAAACATGAAACAAATTCAATTAACACACCACTGAGGCCTT
CTTCACCAGCATCTTGCAGATGCATGCCAAGAGCTTAAGACTGAGGCGGCATGAAATGAA
GGGAGGCAACTGCTACAACGAGACAACAATGATAAGGGCTCCGGATACTGGGGCAGCTGT
TGCGATGGCCGGCCGTGTCATGGCCGCAGAGCAGCAGCATGCAGAGGCCGATTGACACGA
GGGGCAAATTAGTACTTTTCCATGTGATTTTTCTCTCAGTTCTCTCCGTAAATAATACTA
AAATAATATGTTGAGTGTCAAGTAACTAAATACCATGTTTTCGCGGTCTCCTCAAACATA
TGCGTATTCTTTGTGTGTACTGTAGAACTTAAGAAATTATTTGTCCTTTTATTTTTCTTC
TATTTTTTTTTCCTTCTCCTTCTCTCTTTTTGTCTCATTTCCTTCTCTTTTTCTTTCCTA
GAAATTTATAATGTAAACACGAAAAATATATGGAATTTACAATATAACATGGTGGAATTA
TGTCATGAAATTAATGTTGAACATTTCAACTATTTCTTTTACCTAAAAATGCTACGTCAT
AAATACTTATAGTGCCTTTTACATTAAGGAAAGTGCGATTTAGCAATGAGTGGCANACCA
TACTTGAGACGCACGGAGATCCCCCCCATCTCGCTCATGTCTAGCGATAACGTGCCCGAT
TTACA

clustalw multiple alignements is not computed in this case