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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2310 cluster # 2310       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2310#0 length = 733 sequences # 2  

consensusID : consensus_2310#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 733
fasta sequence
                              [CTCATACGCTCCCATCCTGATGGCTGTCTCTCGTGCGTGCCCGGCGATGCCACCAGAGACGCGGCTGCAGCAGCGCGCTTGGTTGCCGTGCGCGGGCCACAACGTCCTCTCCGCGAGACGGAAGAGCTGCCGCGGCTGGGCGGTGGCGCATCTCCTTCGCCGCCAACCTCGGAGGCCACGACCGTTGCCGGGCATAGCGGAGGCCGGTGGCAGGCTGGCCGCTGGCAACATCAAAGCAAGGAGCTTTTTCATTGTTTGCTTGAGTGCCTGGCCGGGTAAATCCATGCTCTTTGAACATTTCTTGCTTGAATCTGTTGGGCCTTTCTTGTTTTTCTTAGGACAAAGTACTATCGTTTTTGTTAGATACAAGTGCTAGTGCATCTAGCAATTCTAGTGGTTACTGGTTAGTGCGGCTGCTAATGTTGATGCAAAGTCATCAAGAGTTATATGATTGAACTATTAATATGTAGTTTTTGGGATCTTAATCGCTTGTTAATTTGAATTGCTTATAGAAAAGAAAATTGCAAAATATTGATATGGAATCGGCTACACTAATACTAGTATTATATCGCTTTTTCTTTATAAAAGCTCCTTATTTTTTTTGTATTTTTAATATATATTAATGTAATTTCCTTAATTTTTTTTGTGTGTTTTCAATATATATATATATATATATATACGTATCCCCGTATCCTTGTTTTTTTTGGAAAATGTCGTATCCGGAAAATGTCGT]

[+] EMBL CB653291             [CTCATACGCTCCCATCCTGATGGCTGTCTCTCGTGCGTGCCCGGCGATGCCACCAGAGACGCGGCTGCAGCAGCGCGCTTGGTTGCCGTGCGCGGGCCACAACGTCCTCTCCGCGAGACGGAAGAGCTGCCGCGGCTGGGCGGTGGCGCATCTCCTTCGCCGCCAACCTCGGAGGCCACGACCGTTGCCGGGCATAGCGGAGGCCGGTGGCAGGCTGGCCGCTGGCAACATCAAAGCAAGGAGCTTTTTCATTGTTTGCTTGAGTGCCTGGCCGGGTAAATCCATGCTCTTTGAACATTTCTTGCTTGAATCTGTTGGGCCTTTCTTGTTTTTCTTAGGACAAAGTACTATCGTTTTTGTTAGATACAAGTGCTAGTGCATCTAGCAATTCTAGTGGTTACTGGTTAGTGCGGCTGCTAATGTTGATGCAAAGTCATCAAGAGTTATATGATTGAACTATTAATATGTAGTTTTTGGGATCTTAATCGCTTGTTAATTTGAATTGCTTATAGAAAAGAAAATTGCAAAATATTGATATGGAATCGGCTACACTAATACTAGTATTATATCGCTTTTTCTTTATAAAAGCTCCTTATTTTTTTTGTATTTTTAATATATATTAATGTAATTTCCTTAATTTTTTTTGTGTGTTTTCAATATATATATATATATATATATACGTATCCCCGTATCCTTGTTTTTTTTGGAAAATGTCGTATCCGGAAAATGTCGT]
[+] EMBL AK107804             [                                                    CCAGAGACGCGGCTGCAGCAGCGCGCTTGGTTGCCGTGCGCGGGCCACAACGTCCTCTCCGCGAGACGGAAGAGCTGCCGCGGCTGGGCGGTGGCGCATCTCCTTCGCCGCCAACCTCGGAGGCCACGACCGTTGCCGGGCATAGCGGAGGCCGGTGGCAGGCTGGCCGCTGGCAACATCAAAGCAAGGAGCTTTTTCATTGTTTGCTTGAGTGCCTGGCCGGGTAAATCCATGCTCTTTGAACATTTCTTGCTTGAATCTGTTGGGCCTTTCTTGTTTTTCTTAGGACAAAGTACTATCGTTTTTGTTAGATACAAGTGCTAGTGCATCTAGCAATTCTAGTGGTTACTGGTTAGTGCGGCTGCTAATGTTGATGCAAAGTCATCAAGAGTTATATGATTGAACTATTAATATGTAGTTTTTGGGATCTTAATCGCTTGTTAATTTGAATTGCTTATAGAAAAGAAAATTGCA                                                                                                                                                                                                               ]


>consensus_2310#0 CTCATACGCTCCCATCCTGATGGCTGTCTCTCGTGCGTGCCCGGCGATGCCACCAGAGAC GCGGCTGCAGCAGCGCGCTTGGTTGCCGTGCGCGGGCCACAACGTCCTCTCCGCGAGACG GAAGAGCTGCCGCGGCTGGGCGGTGGCGCATCTCCTTCGCCGCCAACCTCGGAGGCCACG ACCGTTGCCGGGCATAGCGGAGGCCGGTGGCAGGCTGGCCGCTGGCAACATCAAAGCAAG GAGCTTTTTCATTGTTTGCTTGAGTGCCTGGCCGGGTAAATCCATGCTCTTTGAACATTT CTTGCTTGAATCTGTTGGGCCTTTCTTGTTTTTCTTAGGACAAAGTACTATCGTTTTTGT TAGATACAAGTGCTAGTGCATCTAGCAATTCTAGTGGTTACTGGTTAGTGCGGCTGCTAA TGTTGATGCAAAGTCATCAAGAGTTATATGATTGAACTATTAATATGTAGTTTTTGGGAT CTTAATCGCTTGTTAATTTGAATTGCTTATAGAAAAGAAAATTGCAAAATATTGATATGG AATCGGCTACACTAATACTAGTATTATATCGCTTTTTCTTTATAAAAGCTCCTTATTTTT TTTGTATTTTTAATATATATTAATGTAATTTCCTTAATTTTTTTTGTGTGTTTTCAATAT ATATATATATATATATATACGTATCCCCGTATCCTTGTTTTTTTTGGAAAATGTCGTATC CGGAAAATGTCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)