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Oryza sativa
cluster # 2318 cluster # 2318       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2318#0 length = 1489 sequences # 2  

consensusID : consensus_2318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1489
fasta sequence
                              [ATCTTAGCTGGAACGTGCATGCGTACGTTGCCCACATGGCGCTCAAGCCAACGCTCGCCGCCCTCCTCTTCTCCCTGGCCGCCATCCACGGCATCGTCGTCGTCGCCGTCGACGCGGCCGCTGCCGCCGTGTCACTGGGTGGGAGCGCGCGACGCATACCGGCCGTCTTCGCCTTCGGGGACTCCACGCTCGACGCGGGCAACAACAACCGCCTCGTCACCGCGGTGCGCGCCGACCACCCGCCCTACGGCCAGGACTTCCCCGGCGGCGCGCCGACGGGGAGGTTCTGCGACGGCAAGATCATGAGCGACTTCCTCGTGGAGGCGCTCGGCGTCAAGGGCCTCCTGCCGGCGTACCACTCCGGCTCCGAAGTCCTCAGCGACGCCGACGCCGCCACGGGGGTCAGCTTCGCGTCCGGCGGCTCGGGACTCGACGACAGGACGGCGACGAACGCCGGCGTCGCGACGATGGCCTCGCAGATCGCGGACTTTAGCGAGCTCGTCGGGAGGATGGGCGCCGGCAAGGCCGGTGAGGTGGTGAACAAGTCGCTGTTCCTCGTGTCGGCCGGGACGAACGACATGATCATGAATTACTACCTGCTGCCGAGCAAGTACACGCTGGACCAGTATCACGCCCTCCTCATCGGCAAGCTCCGATCGTACATTCAGAGCCTGTACAACCTGGGCGCCCGGAGACTCCTGGTCGCCGGATTGCCGCCGGTCGGATGCCTCCCGGTGCAGATGACGCTGGCGGCGCTGAGGCAGCCGCCGAGGCCACAGGGCTGCATCGCGGAGCAGAACGCGGAGGCGGAGAAGTACAACGCCAAGCTCCGCAAAATGCTCACCAAGTTCCAGTCAACTTCGCCCGGAGCGAAAGCCGTGTACGCTGACATCTACACCCCTCTCACGGACATGGTCGATCATCCCCAGAAGTATGGTTTCGCCGAAACTGGCAAGGGGTGCTGCGGCACTGGGCTGCTGGAGATGGGGCCCCTGTGCACCGATCTGATGCCGACCTGCACGACGCCGGCCCAGTTCATGTTCTGGGACTCTGTCCATCCGACGCAAGCCACATACAAAGCTGTCGCTGACCACTTCCTGCGAACTAACATGTTGCAGTTCGATGATTAAATGTGGCTTAATTAATGCCACAACTTACTAGCAGTAGCTCTGAAAGGTTTGTACGCACTGTGACAGTACTTATAGTACATCTTTGAAGACCAACCATTGCAACTTCGTCTTCAATGCAACGCTTTACTTGCAACCATTACCGACCTGAATTGCTGTTGCTAGTTGTGCACTGGCTTTTTTTATCAGGCTTCTTGGGTTTGTTTGGTTTACGGTCTAAGAGCAAATACTATAAGTTTGTAAGCACTTTATCTCTACATACCATGTAGATTTATTTACTGTTGTGGAAGAGAGAAGAGATGAAAGAAAGAATTAAGCCATCCCTCGTGTAAGATACAACCCCAATACAAACTTCAATAAAT]

[+] EMBL AK064727             [ATCTTAGCTGGAACGTGCATGCGTACGTTGCCCACATGGCGCTCAAGCCAACGCTCGCCGCCCTCCTCTTCTCCCTGGCCGCCATCCACGGCATCGTCGTCGTCGCCGTCGACGCGGCCGCTGCCGCCGTGTCACTGGGTGGGAGCGCGCGACGCATACCGGCCGTCTTCGCCTTCGGGGACTCCACGCTCGACGCGGGCAACAACAACCGCCTCGTCACCGCGGTGCGCGCCGACCACCCGCCCTACGGCCAGGACTTCCCCGGCGGCGCGCCGACGGGGAGGTTCTGCGACGGCAAGATCATGAGCGACTTCCTCGTGGAGGCGCTCGGCGTCAAGGGCCTCCTGCCGGCGTACCACTCCGGCTCCGAAGTCCTCAGCGACGCCGACGCCGCCACGGGGGTCAGCTTCGCGTCCGGCGGCTCGGGACTCGACGACAGGACGGCGACGAACGCCGGCGTCGCGACGATGGCCTCGCAGATCGCGGACTTTAGCGAGCTCGTCGGGAGGATGGGCGCCGGCAAGGCCGGTGAGGTGGTGAACAAGTCGCTGTTCCTCGTGTCGGCCGGGACGAACGACATGATCATGAATTACTACCTGCTGCCGAGCAAGTACACGCTGGACCAGTATCACGCCCTCCTCATCGGCAAGCTCCGATCGTACATTCAGAGCCTGTACAACCTGGGCGCCCGGAGACTCCTGGTCGCCGGATTGCCGCCGGTCGGATGCCTCCCGGTGCAGATGACGCTGGCGGCGCTGAGGCAGCCGCCGAGGCCACAGGGCTGCATCGCGGAGCAGAACGCGGAGGCGGAGAAGTACAACGCCAAGCTCCGCAAAATGCTCACCAAGTTCCAGTCAACTTCGCCCGGAGCGAAAGCCGTGTACGCTGACATCTACACCCCTCTCACGGACATGGTCGATCATCCCCAGAAGTATGGTTTCGCCGAAACTGGCAAGGGGTGCTGCGGCACTGGGCTGCTGGAGATGGGGCCCCTGTGCACCGATCTGATGCCGACCTGCACGACGCCGGCCCAGTTCATGTTCTGGGACTCTGTCCATCCGACGCAAGCCACATACAAAGCTGTCGCTGACCACTTCCTGCGAACTAACATGTTGCAGTTCGATGATTAAATGTGGCTTAATTAATGCCACAACTTACTAGCAGTAGCTCTGAAAGGTTTGTACGCACTGTGACAGTACTTATAGTACATCTTTGAAGACCAACCATTGCAACTTCGTCTTCAATGCAACGCTTTACTTGCAACCATTACCGACCTGAATTGCTGTTGCTAGTTGTGCACTGGCTTTTTTTATCAGGCTTCTTGGGTTTGTTTGGTTTACGGTCTAAGAGCAAATACTATAA                                                                                                                               ]
[-] EMBL CB653959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACGCTGGCGGCGCTGAGGCAGCCGCCGAGGCCACAGGGCTGCATCGCGGAGCAGAACGCGGAGGCGGAGAAGTACAACGCCAAGCTCCGCAAAATGCTCACCAAGTTCCAGTCAACTTCGCCCGGAGCGAAAGCCGTGTACGCTGACATATACACCCCTCTCACGGACATGGTCGATCATCCCCAGAAGTATGGTTTCGCCGAAACTGGCAAGGGGTGCTGCGGCACTGGGCTGCTGGAGATGGGGCCCCTGTGCACCGATCTGATGCCGACCTGCACGACGCCGGCCCAGTTCATGTTCTGGGACTCTGTCCATCCGACGCAAGCCACATACAAAGCTGTCGCTGACCACTTCCTGCGAACTAACATGTTGCAGTTCGATGATTAAATGTGGCTTAATTAATGCCACAACTTACTAGCAGTAGCTCTGAAAGGTTTGTACGCACTGTGACAGTACTTATAGTACATCTTTGAAGACCAACCATTGCAACTTCGTCTTCAATGCAACGCTTTACTTGCAACCATTACCGACCTGAATTGCTGTTGCTAGTTGTGCACTGGCTTTTTTTATCAGGCTTCTTGGGTTTGTTTGGTTTACGGTCTAAGAGCAAATACTATAAGTTTGTAAGCACTTTATCTCTACATACCATGTAGATTTATTTACTGTTGTGGAAGAGAGAAGAGATGAAAGAAAGAATTAAGCCATCCCTCGTGTAAGATACAACCCCAATACAAACTTCAATAAAT]


>consensus_2318#0 ATCTTAGCTGGAACGTGCATGCGTACGTTGCCCACATGGCGCTCAAGCCAACGCTCGCCG CCCTCCTCTTCTCCCTGGCCGCCATCCACGGCATCGTCGTCGTCGCCGTCGACGCGGCCG CTGCCGCCGTGTCACTGGGTGGGAGCGCGCGACGCATACCGGCCGTCTTCGCCTTCGGGG ACTCCACGCTCGACGCGGGCAACAACAACCGCCTCGTCACCGCGGTGCGCGCCGACCACC CGCCCTACGGCCAGGACTTCCCCGGCGGCGCGCCGACGGGGAGGTTCTGCGACGGCAAGA TCATGAGCGACTTCCTCGTGGAGGCGCTCGGCGTCAAGGGCCTCCTGCCGGCGTACCACT CCGGCTCCGAAGTCCTCAGCGACGCCGACGCCGCCACGGGGGTCAGCTTCGCGTCCGGCG GCTCGGGACTCGACGACAGGACGGCGACGAACGCCGGCGTCGCGACGATGGCCTCGCAGA TCGCGGACTTTAGCGAGCTCGTCGGGAGGATGGGCGCCGGCAAGGCCGGTGAGGTGGTGA ACAAGTCGCTGTTCCTCGTGTCGGCCGGGACGAACGACATGATCATGAATTACTACCTGC TGCCGAGCAAGTACACGCTGGACCAGTATCACGCCCTCCTCATCGGCAAGCTCCGATCGT ACATTCAGAGCCTGTACAACCTGGGCGCCCGGAGACTCCTGGTCGCCGGATTGCCGCCGG TCGGATGCCTCCCGGTGCAGATGACGCTGGCGGCGCTGAGGCAGCCGCCGAGGCCACAGG GCTGCATCGCGGAGCAGAACGCGGAGGCGGAGAAGTACAACGCCAAGCTCCGCAAAATGC TCACCAAGTTCCAGTCAACTTCGCCCGGAGCGAAAGCCGTGTACGCTGACATCTACACCC CTCTCACGGACATGGTCGATCATCCCCAGAAGTATGGTTTCGCCGAAACTGGCAAGGGGT GCTGCGGCACTGGGCTGCTGGAGATGGGGCCCCTGTGCACCGATCTGATGCCGACCTGCA CGACGCCGGCCCAGTTCATGTTCTGGGACTCTGTCCATCCGACGCAAGCCACATACAAAG CTGTCGCTGACCACTTCCTGCGAACTAACATGTTGCAGTTCGATGATTAAATGTGGCTTA ATTAATGCCACAACTTACTAGCAGTAGCTCTGAAAGGTTTGTACGCACTGTGACAGTACT TATAGTACATCTTTGAAGACCAACCATTGCAACTTCGTCTTCAATGCAACGCTTTACTTG CAACCATTACCGACCTGAATTGCTGTTGCTAGTTGTGCACTGGCTTTTTTTATCAGGCTT CTTGGGTTTGTTTGGTTTACGGTCTAAGAGCAAATACTATAAGTTTGTAAGCACTTTATC TCTACATACCATGTAGATTTATTTACTGTTGTGGAAGAGAGAAGAGATGAAAGAAAGAAT TAAGCCATCCCTCGTGTAAGATACAACCCCAATACAAACTTCAATAAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)