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Oryza sativa
cluster # 2373 cluster # 2373       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2373#0 length = 2252 sequences # 2  

consensusID : consensus_2373#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2252
fasta sequence
                              [GAGTGTGGAGTCGACTTGACTCCCAAGTCCACTTCCCTCCATAAAGCGAGCTCGGAGCGCAGCCACAGCAGTGTAGAGCGCAAGCACAGCGACGGCGAGCAACCGCGGTGACCGGAGAAGCGTACTACGTGTATACCGGCGTCGGTCGATCGACGGCAATCGGCCGGATTCCGGTGTGATTGGCTCACCGGCGATATGCACACGAAGCGTCCGCTGCCGGCACAGGCGCCACCAGCTGGGCTTGTCCTGGTGCCCGCGCCCAAGCGCCCGCATGTGGATGCTGCTGCCGGCGGCGGCGGCGGCGTGGCGTCGCCGCGGGGGAAGCGGCAGCTTCGCTCCGGCATGCTCGTCCTCTTCTTCGTCGCGCAAGTCAAGGAGGAGATGAGATACAACCAGCGACTTCGTCGAGTGATACGTGGAGAGAATGCTATTTCCCAGCAAAGGGCAATCGAAACATTTGATTGTGTCTTTCAGAAAGCATTTGACAATGCCTTCCAGAAGCATCTTGATCCAATTTACCGCTCCCTTCAATCCCTTAACAAGCGCACTGATATTCTCAGCCATGAAGTGGAACAAATCAAACATTCAAATTCTAACCATCATGCTAATCAGCAATACAGATCAAAGGCAAATCAAGAGTCTGCTGCCATCACTGAGGAAGTGAATCAAGAACAAACAGCTGCTAGATTTGTCGCGAGTGAAGCTCAGGAGGGGCAAAGAGTTGAGTTGAGGTTCCTCAATAAGTTGAACCCTCTTGTTTTTACAAAGGAAAAAATTACAGCGGAGGATGGTACAGCTATCAAAATTGCCATAGTTAGGGATAATCAGATAATTACATCTGGTCCACTTTCTTCTGCAAGAATTGAAATTTTGGCTCTCCATGGTAACTTTTATGATGTCGTCCCTGATAATTGGACCGAATCTGAGTTTGATCACCGCATAGTAAGTAGTTCACAAGGTCCCGCGTTAGGAGGGGTTTGTCAAGTCAAGCTGAAGAATGGGGAGGCCTCTCCTTCTGATGTATTTTTCAATATACCATCTTCGAAGACTGAAAGTGGAAGGCTCATTCTAGCAGCAAAAGTTCATACAAGTGACATTGGTGGGCTTCGAATTAAGGAAGCTGTGATGATGAATCCTGTTGTGGTGCAGGTTTACCGAAACAAACTAAATAGAAGTAGTGACCGTCCGAAGCTAAAAGATGAAGTACATCGTTTAAAGGGAATTTCAGGAAAGGGATGCCGCACCAAATGGCTTAAAGATAATCAAATCAACACTGTGGAAGAGTTCGTAAAGGCTTTAAATAAGGATGAAGAAAAGATCCGCAATGAGTGTTTCAAGCTAAAGAAGGATAATAAGCTTTGGAAAGATACAATTAAACATGCTAAAGAGTGTGATCTTGAAGGGAATTGCAAGCTGAAATTATATAGAGCTGAAGAGCAGCATGTTGTACTCTTCTTTAACTGCGTGCATGACCTCGTTGGTGCGAAATTTCGTGATCACTATGTTGCAAAGGACAATTTCAGTTCAGATCAACAGGATGCAGTGAATCGTTTGAAGAAACAAGCATATGATGAGCTGGATAGCATTGGCTTTGATCACGAAATGAAAAATAACTATCCGGTGATGACGCTCAGTGATGATGCTTACATTCCCTTCATTGACACAGCACAAAATCCTCCAGATTTGCATGTTACATTTCAAGTTCAGGGTATTGCAGGAGCTGAGATTTATCATGCACATGAACTGCCTCAAGCATTTCCTAACAACAATAATGATTTTGGACAACACTTTTTACATGGCTTTCAAGGTGATCTGACTCAGATGGACCATGACTATGCGCAATTTGGCATTGCTGATATGCAGTGTTATACTACACAGGCACCTGAAGGTACCTCTTATGGAGGCAACAACATGATCGGACCAGCAAATGTACCGCAGAATGTTATTGGTGACGGCTCTATGGACATGTTTGACTGTTATGCATACATCTTTCCGGACAATGAGAACCAGAATGAGAGGCCTCATAGCTCTGCATATCCAGGACCAGTTTAACTGAAGGCTTTGTTGCCAGCTAGTAATCTATCATGATTTCTGATTAATTTCATTCTTTATTTAGATAATGGATATTTTATTGTTTTATTCTTGATGGATGTATTACTTTCAAGAAATATTCTTGCTGTATGTATTAGCATTTGTTGATGCAGAAAATTGAACTGTACTAGTACTTATGTTTCAGAAAAAAAACATCGACT]

[+] EMBL AK068628             [GAGTGTGGAGTCGACTTGACTCCCAAGTCCACTTCCCTCCATAAAGCGAGCTCGGAGCGCAGCCACAGCAGTGTAGAGCGCAAGCACAGCGACGGCGAGCAACCGCGGTGACCGGAGAAGCGTACTACGTGTATACCGGCGTCGGTCGATCGACGGCAATCGGCCGGATTCCGGTGTGATTGGCTCACCGGCGATATGCACACGAAGCGTCCGCTGCCGGCACAGGCGCCACCAGCTGGGCTTGTCCTGGTGCCCGCGCCCAAGCGCCCGCATGTGGATGCTGCTGCCGGCGGCGGCGGCGGCGTGGCGTCGCCGCGGGGGAAGCGGCAGCTTCGCTCCGGCATGCTCGTCCTCTTCTTCGTCGCGCAAGTCAAGGAGGAGATGAGATACAACCAGCGACTTCGTCGAGTGATACGTGGAGAGAATGCTATTTCCCAGCAAAGGGCAATCGAAACATTTGATTGTGTCTTTCAGAAAGCATTTGACAATGCCTTCCAGAAGCATCTTGATCCAATTTACCGCTCCCTTCAATCCCTTAACAAGCGCACTGATATTCTCAGCCATGAAGTGGAACAAATCAAACATTCAAATTCTAACCATCATGCTAATCAGCAATACAGATCAAAGGCAAATCAAGAGTCTGCTGCCATCACTGAGGAAGTGAATCAAGAACAAACAGCTGCTAGATTTGTCGCGAGTGAAGCTCAGGAGGGGCAAAGAGTTGAGTTGAGGTTCCTCAATAAGTTGAACCCTCTTGTTTTTACAAAGGAAAAAATTACAGCGGAGGATGGTACAGCTATCAAAATTGCCATAGTTAGGGATAATCAGATAATTACATCTGGTCCACTTTCTTCTGCAAGAATTGAAATTTTGGCTCTCCATGGTAACTTTTATGATGTCGTCCCTGATAATTGGACCGAATCTGAGTTTGATCACCGCATAGTAAGTAGTTCACAAGGTCCCGCGTTAGGAGGGGTTTGTCAAGTCAAGCTGAAGAATGGGGAGGCCTCTCCTTCTGATGTATTTTTCAATATACCATCTTCGAAGACTGAAAGTGGAAGGCTCATTCTAGCAGCAAAAGTTCATACAAGTGACATTGGTGGGCTTCGAATTAAGGAAGCTGTGATGATGAATCCTGTTGTGGTGCAGGTTTACCGAAACAAACTAAATAGAAGTAGTGACCGTCCGAAGCTAAAAGATGAAGTACATCGTTTAAAGGGAATTTCAGGAAAGGGATGCCGCACCAAATGGCTTAAAGATAATCAAATCAACACTGTGGAAGAGTTCGTAAAGGCTTTAAATAAGGATGAAGAAAAGATCCGCAATGAGTGTTTCAAGCTAAAGAAGGATAATAAGCTTTGGAAAGATACAATTAAACATGCTAAAGAGTGTGATCTTGAAGGGAATTGCAAGCTGAAATTATATAGAGCTGAAGAGCAGCATGTTGTACTCTTCTTTAACTGCGTGCATGACCTCGTTGGTGCGAAATTTCGTGATCACTATGTTGCAAAGGACAATTTCAGTTCAGATCAACAGGATGCAGTGAATCGTTTGAAGAAACAAGCATATGATGAGCTGGATAGCATTGGCTTTGATCACGAAATGAAAAATAACTATCCGGTGATGACGCTCAGTGATGATGCTTACATTCCCTTCATTGACACAGCACAAAATCCTCCAGATTTGCATGTTACATTTCAAGTTCAGGGTATTGCAGGAGCTGAGATTTATCATGCACATGAACTGCCTCAAGCATTTCCTAACAACAATAATGATTTTGGACAACACTTTTTACATGGCTTTCAAGGTGATCTGACTCAGATGGACCATGACTATGCGCAATTTGGCATTGCTGATATGCAGTGTTATACTACACAGGCACCTGAAGGTACCTCTTATGGAGGCAACAACATGATCGGACCAGCAAATGTACCGCAGAATGTTATTGGTGACGGCTCTATGGACATGTTTGACTGTTATGCATACATCTTTCCGGACAATGAGAACCAGAATGAGAGGCCTCATAGCTCTGCATATCCAGGACCAGTTTAACTGAAGGCTTTGTTGCCAGCTAGTAATCTATCATGATTTCTGATTAATTTCATTCTTTATTTAGATAATGGATATTTTATTGTTTTATTCTTGATGGATGTATTACTTTCAAGAAATATTCTTGCTGTATGTATTAGCATTTGTTGATGCAGAAAATTGAACTGTACTAGTACTTATGTTTCAGAAAAAAAACATCGACT]
[+] EMBL CB660589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGCTGCTAGATTTGTCGCGAGTGAAGCTCACGAGGGGCAAAGAGTTGAGTTGAGGTTCCTCAATAAGTTGAACCCTCTTGTTTTTACAAAGGAAAAAATTACAGCGGAGGATGGTACAGCTATCAAAATTGCCATAGTTAGGGATAATCAGATAATTACATCTGGTCCACTTTCTTCTGCAAGAATTGAAATTTTGGCTCTCCATGGTAACTTTTATGATGTTGTCCCTGATAATTGGACCGAATCTGAGTTTGATCACCGCATAGTAAGTAGTTCACAAGGTCCCGCGTTAGGAGGGGTTTGTCAAGTCAAGCTGAAGAATGGGGAGGCCTCTCCTTCTGATGTATTTTTCAATATACCATCTTCGAAGACTGAAAGTGGAAGGCTCATTCTAGCAGCAAAAGTTCATACAAGTGACATTGGTGGGCTTCGAATTAAGGAAGCTGTGATGATGAATCCTGTTGTGGTGCAGGTTTACCGAAACAAACTAAATAGAAGTAGTGACCGTCCGAAGCTAAAAGATGAAGTACATCGTTTAAAGGGAATTTCAGGAAAGGGATGCCGCACCAAATGGCTTAAAGATAATCAAATCAACACTGTGGAAGAGTTCGTAAAGGCTTTAAATAAGGATGAAGAAAAGATCCGCAATGAGTGTTTCAAGCTAAAGAAGGATAATAAGCTTTGGAAAGATACAATTAAACATGCTAAAGAGTGTGATCTTGAAGGGAATTGCAAGCTGAAATTATATAGAGCTGAAGAGCAGCATGTTGTACTCTTCTTTAACTGCGTGCATGACCTCGTTGGTGCGAAATTTCGTGATCACTATGTTGCAAAGGACAATTTCAGTTCAGATCAACAGGATGCAGTGAATCGTTTGAAGAAAC AGCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_2373#0 GAGTGTGGAGTCGACTTGACTCCCAAGTCCACTTCCCTCCATAAAGCGAGCTCGGAGCGC AGCCACAGCAGTGTAGAGCGCAAGCACAGCGACGGCGAGCAACCGCGGTGACCGGAGAAG CGTACTACGTGTATACCGGCGTCGGTCGATCGACGGCAATCGGCCGGATTCCGGTGTGAT TGGCTCACCGGCGATATGCACACGAAGCGTCCGCTGCCGGCACAGGCGCCACCAGCTGGG CTTGTCCTGGTGCCCGCGCCCAAGCGCCCGCATGTGGATGCTGCTGCCGGCGGCGGCGGC GGCGTGGCGTCGCCGCGGGGGAAGCGGCAGCTTCGCTCCGGCATGCTCGTCCTCTTCTTC GTCGCGCAAGTCAAGGAGGAGATGAGATACAACCAGCGACTTCGTCGAGTGATACGTGGA GAGAATGCTATTTCCCAGCAAAGGGCAATCGAAACATTTGATTGTGTCTTTCAGAAAGCA TTTGACAATGCCTTCCAGAAGCATCTTGATCCAATTTACCGCTCCCTTCAATCCCTTAAC AAGCGCACTGATATTCTCAGCCATGAAGTGGAACAAATCAAACATTCAAATTCTAACCAT CATGCTAATCAGCAATACAGATCAAAGGCAAATCAAGAGTCTGCTGCCATCACTGAGGAA GTGAATCAAGAACAAACAGCTGCTAGATTTGTCGCGAGTGAAGCTCAGGAGGGGCAAAGA GTTGAGTTGAGGTTCCTCAATAAGTTGAACCCTCTTGTTTTTACAAAGGAAAAAATTACA GCGGAGGATGGTACAGCTATCAAAATTGCCATAGTTAGGGATAATCAGATAATTACATCT GGTCCACTTTCTTCTGCAAGAATTGAAATTTTGGCTCTCCATGGTAACTTTTATGATGTC GTCCCTGATAATTGGACCGAATCTGAGTTTGATCACCGCATAGTAAGTAGTTCACAAGGT CCCGCGTTAGGAGGGGTTTGTCAAGTCAAGCTGAAGAATGGGGAGGCCTCTCCTTCTGAT GTATTTTTCAATATACCATCTTCGAAGACTGAAAGTGGAAGGCTCATTCTAGCAGCAAAA GTTCATACAAGTGACATTGGTGGGCTTCGAATTAAGGAAGCTGTGATGATGAATCCTGTT GTGGTGCAGGTTTACCGAAACAAACTAAATAGAAGTAGTGACCGTCCGAAGCTAAAAGAT GAAGTACATCGTTTAAAGGGAATTTCAGGAAAGGGATGCCGCACCAAATGGCTTAAAGAT AATCAAATCAACACTGTGGAAGAGTTCGTAAAGGCTTTAAATAAGGATGAAGAAAAGATC CGCAATGAGTGTTTCAAGCTAAAGAAGGATAATAAGCTTTGGAAAGATACAATTAAACAT GCTAAAGAGTGTGATCTTGAAGGGAATTGCAAGCTGAAATTATATAGAGCTGAAGAGCAG CATGTTGTACTCTTCTTTAACTGCGTGCATGACCTCGTTGGTGCGAAATTTCGTGATCAC TATGTTGCAAAGGACAATTTCAGTTCAGATCAACAGGATGCAGTGAATCGTTTGAAGAAA CAAGCATATGATGAGCTGGATAGCATTGGCTTTGATCACGAAATGAAAAATAACTATCCG GTGATGACGCTCAGTGATGATGCTTACATTCCCTTCATTGACACAGCACAAAATCCTCCA GATTTGCATGTTACATTTCAAGTTCAGGGTATTGCAGGAGCTGAGATTTATCATGCACAT GAACTGCCTCAAGCATTTCCTAACAACAATAATGATTTTGGACAACACTTTTTACATGGC TTTCAAGGTGATCTGACTCAGATGGACCATGACTATGCGCAATTTGGCATTGCTGATATG CAGTGTTATACTACACAGGCACCTGAAGGTACCTCTTATGGAGGCAACAACATGATCGGA CCAGCAAATGTACCGCAGAATGTTATTGGTGACGGCTCTATGGACATGTTTGACTGTTAT GCATACATCTTTCCGGACAATGAGAACCAGAATGAGAGGCCTCATAGCTCTGCATATCCA GGACCAGTTTAACTGAAGGCTTTGTTGCCAGCTAGTAATCTATCATGATTTCTGATTAAT TTCATTCTTTATTTAGATAATGGATATTTTATTGTTTTATTCTTGATGGATGTATTACTT TCAAGAAATATTCTTGCTGTATGTATTAGCATTTGTTGATGCAGAAAATTGAACTGTACT AGTACTTATGTTTCAGAAAAAAAACATCGACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)