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Oryza sativa
cluster # 2379 cluster # 2379       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2379#0 length = 2580 sequences # 1  
 consensus_2379#1 length = 1649 sequences # 1  
consensusID : consensus_2379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2580
fasta sequence 
                              [GTAGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCCTACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGGCGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGCAGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCATCTCCGCCACCTCCACCACCTGCCCCACCTCCCTCGCCGCAGCTCAGCGCCCGGAGAAGCGGCCTCGGTACCAGGATGTGGACGAGGAGCAGCCCGCCGCCTCCGAGTGCTCCGAGATCATCGGTGGCGCGAGGCCGCGCGCCGCCGAGGTCGAGGTCTCCGAGTCGTCGTGCCTCGCCTCCGTCCTCGAGTCCTACCTCGCCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGCCTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGAGGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTCGTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGCCTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGCTCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCGGTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTCCATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGATCATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCTGATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGGAATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCTTCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGAGTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCTCTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTTGGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGCCGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTATGGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATGGTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCTGCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAGTACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAAGAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGCAACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAAGCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTTCTAATCAAACATCCTGTTTACAAATTGCAACTGGTGCCAGAATGAAATTTGTTCTCCGGGTGGTATTGCACTGCACGAGGTTCGATTCTGTGACCCTGAAAGACGCATACTCAGATACTCTGATGCTCAGGTTTCAGATTCTGGGATGAATAAAATGCTACTAGTAGTATCATCTTCTTCTGGATCTGCAAACAGATGTTCAGTTAGCTGAAGATCCAGAGTACCACCTCGTTTGCTCAGGATGCAACAGGAAGGGTCTGCATCCAGGTGGGCTACCTGAAGTGGACGAAGCGGTCATCTTCGTGCCGCTGCTCGAGTGGCCTAGTGGGGACCCCGGCTGCGCCCGATGCCTCGGCCACTTTAAAAACTCGGATCGCGAGAGTTCCTGCACGCCATAAAAATGAGGAAAACGAGAAAGAAGGGAGGGCGTTCGCGTACACCCCCCTTTCAGCCCCACTTGCGCCCGCGCTCTCGTTGAGCCGTCTGCCTTTTGGGGTTCTAGAGTGAATAGGGTCGGCACGTTAGCGGCGAGCCGGCGACGGGTAATGTGGTGTGCCAACAACTTTCAGCTGCTGCTGAAGTGAAGAGCAGGTGGCGATCAACCAGTCCCGGCACTGAACTACTGAACCTGAAGTGGTTACTCCATTCATCGACAGAGATATTTAATTATTTGTCACTTTTAGATGTAATATTTTACCACATAAACCTACAAATCATAAACATATAAGTGACAAATTATTTAACGCCACATCGAAAAATGGTAAATGCTTATTTGCCCCT]

[+] EMBL AK074008             [GTAGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCCTACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGGCGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGCAGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCATCTCCGCCACCTCCACCACCTGCCCCACCTCCCTCGCCGCAGCTCAGCGCCCGGAGAAGCGGCCTCGGTACCAGGATGTGGACGAGGAGCAGCCCGCCGCCTCCGAGTGCTCCGAGATCATCGGTGGCGCGAGGCCGCGCGCCGCCGAGGTCGAGGTCTCCGAGTCGTCGTGCCTCGCCTCCGTCCTCGAGTCCTACCTCGCCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGCCTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGAGGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTCGTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGCCTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGCTCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCGGTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTCCATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGATCATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCTGATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGGAATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCTTCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGAGTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCTCTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTTGGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGCCGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTATGGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATGGTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCTGCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAGTACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAAGAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGCAACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAAGCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTTCTAATCAAACATCCTGTTTACAAATTGCAACTGGTGCCAGAATGAAATTTGTTCTCCGGGTGGTATTGCACTGCACGAGGTTCGATTCTGTGACCCTGAAAGACGCATACTCAGATACTCTGATGCTCAGGTTTCAGATTCTGGGATGAATAAAATGCTACTAGTAGTATCATCTTCTTCTGGATCTGCAAACAGATGTTCAGTTAGCTGAAGATCCAGAGTACCACCTCGTTTGCTCAGGATGCAACAGGAAGGGTCTGCATCCAGGTGGGCTACCTGAAGTGGACGAAGCGGTCATCTTCGTGCCGCTGCTCGAGTGGCCTAGTGGGGACCCCGGCTGCGCCCGATGCCTCGGCCACTTTAAAAACTCGGATCGCGAGAGTTCCTGCACGCCATAAAAATGAGGAAAACGAGAAAGAAGGGAGGGCGTTCGCGTACACCCCCCTTTCAGCCCCACTTGCGCCCGCGCTCTCGTTGAGCCGTCTGCCTTTTGGGGTTCTAGAGTGAATAGGGTCGGCACGTTAGCGGCGAGCCGGCGACGGGTAATGTGGTGTGCCAACAACTTTCAGCTGCTGCTGAAGTGAAGAGCAGGTGGCGATCAACCAGTCCCGGCACTGAACTACTGAACCTGAAGTGGTTACTCCATTCATCGACAGAGATATTTAATTATTTGTCACTTTTAGATGTAATATTTTACCACATAAACCTACAAATCATAAACATATAAGTGACAAATTATTTAACGCCACATCGAAAAATGGTAAATGCTTATTTGCCCCT]




>consensus_2379#0
GTAGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCC
TACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGG
CGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGC
AGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCAT
CTCCGCCACCTCCACCACCTGCCCCACCTCCCTCGCCGCAGCTCAGCGCCCGGAGAAGCG
GCCTCGGTACCAGGATGTGGACGAGGAGCAGCCCGCCGCCTCCGAGTGCTCCGAGATCAT
CGGTGGCGCGAGGCCGCGCGCCGCCGAGGTCGAGGTCTCCGAGTCGTCGTGCCTCGCCTC
CGTCCTCGAGTCCTACCTCGCCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGC
CTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGA
GGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTC
GTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGC
CTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGC
TCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCG
GTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTC
CATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGAT
CATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCT
GATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGG
AATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCT
TCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGA
GTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCT
CTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTT
GGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGC
CGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTAT
GGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATG
GTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCT
GCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAG
TACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAA
GAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGC
AACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAA
GCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTT
CTAATCAAACATCCTGTTTACAAATTGCAACTGGTGCCAGAATGAAATTTGTTCTCCGGG
TGGTATTGCACTGCACGAGGTTCGATTCTGTGACCCTGAAAGACGCATACTCAGATACTC
TGATGCTCAGGTTTCAGATTCTGGGATGAATAAAATGCTACTAGTAGTATCATCTTCTTC
TGGATCTGCAAACAGATGTTCAGTTAGCTGAAGATCCAGAGTACCACCTCGTTTGCTCAG
GATGCAACAGGAAGGGTCTGCATCCAGGTGGGCTACCTGAAGTGGACGAAGCGGTCATCT
TCGTGCCGCTGCTCGAGTGGCCTAGTGGGGACCCCGGCTGCGCCCGATGCCTCGGCCACT
TTAAAAACTCGGATCGCGAGAGTTCCTGCACGCCATAAAAATGAGGAAAACGAGAAAGAA
GGGAGGGCGTTCGCGTACACCCCCCTTTCAGCCCCACTTGCGCCCGCGCTCTCGTTGAGC
CGTCTGCCTTTTGGGGTTCTAGAGTGAATAGGGTCGGCACGTTAGCGGCGAGCCGGCGAC
GGGTAATGTGGTGTGCCAACAACTTTCAGCTGCTGCTGAAGTGAAGAGCAGGTGGCGATC
AACCAGTCCCGGCACTGAACTACTGAACCTGAAGTGGTTACTCCATTCATCGACAGAGAT
ATTTAATTATTTGTCACTTTTAGATGTAATATTTTACCACATAAACCTACAAATCATAAA
CATATAAGTGACAAATTATTTAACGCCACATCGAAAAATGGTAAATGCTTATTTGCCCCT

consensusID : consensus_2379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1649
fasta sequence 
                              [AGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCCTACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGGCGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGCAGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCATCTCCGCCACCTCCACCACCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGCCTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGAGGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTCGTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGCCTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGCTCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCGGTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTCCATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGATCATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCTGATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGGAATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCTTCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGAGTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCTCTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTTGGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGCCGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTATGGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATGGTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCTGCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAGTACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAAGAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGCAACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAAGCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTTCTAATCAAACATCCTGTTTACAAATTGCAACTGG]

[+] EMBL AK065907             [AGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCCTACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGGCGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGCAGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCATCTCCGCCACCTCCACCACCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGCCTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGAGGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTCGTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGCCTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGCTCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCGGTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTCCATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGATCATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCTGATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGGAATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCTTCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGAGTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCTCTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTTGGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGCCGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTATGGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATGGTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCTGCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAGTACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAAGAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGCAACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAAGCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTTCTAATCAAACATCCTGTTTACAAATTGCAACTGG]




>consensus_2379#1
AGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCCTA
CCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGGCG
CGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGCAG
CCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCATCT
CCGCCACCTCCACCACCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGCCTACT
CCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGAGGAGG
TGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTCGTCCT
CGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGCCTTGG
CGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGCTCTAC
AAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCGGTTCC
GGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTCCATGC
TCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGATCATGG
AGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCTGATGG
ACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGGAATCG
CCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCTTCAAA
AAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGAGTGGC
TGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCTCTGGT
TCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTTGGCCT
TGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGCCGCAG
TGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTATGGAGA
CTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATGGTTGA
CCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCTGCCCA
TTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAGTACAC
GTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAAGAGGG
CAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGCAACCA
CGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAAGCTGT
CTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTTCTAAT
CAAACATCCTGTTTACAAATTGCAACTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2379#0      GTAGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCC 60
consensus_2379#1      --AGCATCACAAATTCACAATTCACACACAAAGCACACAGCGCCGCACGCCAATGCCTCC 58
                        **********************************************************

consensus_2379#0      TACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGG 120
consensus_2379#1      TACCATGCTTGCATCGGTGCCGACGAGGCCGCGCTCCCATCCCTTCCGCCGGCGGCGAGG 118
                      ************************************************************

consensus_2379#0      CGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGC 180
consensus_2379#1      CGCGGCGGCGGCGGCTCCTCCTCTGCTCCCTGATCAGATCGCGGCGGCGGCGGCGGCGGC 178
                      ************************************************************

consensus_2379#0      AGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCAT 240
consensus_2379#1      AGCCAAGCGACCCGCGGAGTCGTCCACCTCGGCCTCCTCCTGCTTCCACAGCGAGGTCAT 238
                      ************************************************************

consensus_2379#0      CTCCGCCACCTCCACCACCTGCCCCACCTCCCTCGCCGCAGCTCAGCGCCCGGAGAAGCG 300
consensus_2379#1      CTCCGCCACCTCCACCACCTGCCCC----------------------------------- 263
                      *************************                                   

consensus_2379#0      GCCTCGGTACCAGGATGTGGACGAGGAGCAGCCCGCCGCCTCCGAGTGCTCCGAGATCAT 360
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      CGGTGGCGCGAGGCCGCGCGCCGCCGAGGTCGAGGTCTCCGAGTCGTCGTGCCTCGCCTC 420
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      CGTCCTCGAGTCCTACCTCGCCTGCCCCGAGCAGCTCGCCAACGACGCCGAGACGACCGC 480
consensus_2379#1      ----------------------------GAGCAGCTCGCCAACGACGCCGAGACGACCGC 295
                                                  ********************************

consensus_2379#0      CTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGA 540
consensus_2379#1      CTACTCCTCAGCCCGCGAGGACCTCACGCTGTCGGAGACCGAGGAGGAGGAGGAGGAGGA 355
                      ************************************************************

consensus_2379#0      GGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTC 600
consensus_2379#1      GGAGGTGCGCAGTGGTCCCTGCATCTGCACCGATTGCTCGTTTAGCCCCCTTCATGAGTC 415
                      ************************************************************

consensus_2379#0      GTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGC 660
consensus_2379#1      GTCCTCGTCGTCCGACGACGACAACGCCGTGCCCTCCCCCACCTTCTCCCTGTTCCTCGC 475
                      ************************************************************

consensus_2379#0      CTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGC 720
consensus_2379#1      CTTGGCGGAGCAGTTCGTCCCCTTCACGCATCCCAAAACGCCCACCGCCACGGATGTCGC 535
                      ************************************************************

consensus_2379#0      TCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCG 780
consensus_2379#1      TCTACAAGCGGGAGAGGGGAAGAGATTTGAGGACTTGGACAATGAGGTGAGCTACGAGCG 595
                      ************************************************************

consensus_2379#0      GTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTC 840
consensus_2379#1      GTTCCGGCGGCGCGAGCGGCGAGGGGTGGTAGCCCGCGACTACATTGAGGTGTACTCCTC 655
                      ************************************************************

consensus_2379#0      CATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGAT 900
consensus_2379#1      CATGCTCGGCAGCTACGGCCGCGCCGTCGTGGAGCAGCGCGTTGTCATGGTGAACTGGAT 715
                      ************************************************************

consensus_2379#0      CATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCT 960
consensus_2379#1      CATGGAGCATTCACAAGCGATGAAGCTGCAGCCAGAGACCGTGTTCATGGGGATAGGGCT 775
                      ************************************************************

consensus_2379#0      GATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGG 1020
consensus_2379#1      GATGGACCGCTTCTTGACACGTGGATATGTAAAGGGCTCTAGGAACCTGCAGTTGCTGGG 835
                      ************************************************************

consensus_2379#0      AATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCT 1080
consensus_2379#1      AATCGCCTGCACCACCTTGGCAACCCGCATTGAAGAGAATCAACCCTATAATTGCATCCT 895
                      ************************************************************

consensus_2379#0      TCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGA 1140
consensus_2379#1      TCAAAAAGCTTTCAAAGTAGGGATCAATACTTACAGCCGAAGTGAGGTCGTCGCCATGGA 955
                      ************************************************************

consensus_2379#0      GTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCT 1200
consensus_2379#1      GTGGCTGGTTCAGGAGGTCCTTGACTTCCAGTGCTTTGTCACAACAACCCATCATTTCCT 1015
                      ************************************************************

consensus_2379#0      CTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTT 1260
consensus_2379#1      CTGGTTCTATCTGAAGGCTGCGAATGCAGATGACAGAGTCGAGGACCTGGCGAAGTACTT 1075
                      ************************************************************

consensus_2379#0      GGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGC 1320
consensus_2379#1      GGCCTTGCTCTCACTTCTGGACCACAAACATCTCTCCTTCTGGCCCTCCACTGTGGCAGC 1135
                      ************************************************************

consensus_2379#0      CGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTAT 1380
consensus_2379#1      CGCAGTGGTAGCCCTTGCTTGCCTTGCCACAAACAATGAGTCATCATGCCATTTGGTTAT 1195
                      ************************************************************

consensus_2379#0      GGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATG 1440
consensus_2379#1      GGAGACTCACATGAGAACGAAGAATGATGATCTGCCTGAATGCCTAATGAGTCTCGAATG 1255
                      ************************************************************

consensus_2379#0      GTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCT 1500
consensus_2379#1      GTTGACCAATTATGCTTCCTGATTTGAACAAACCCAGGTGATATGCCGACCCAATCTTCT 1315
                      ************************************************************

consensus_2379#0      GCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAG 1560
consensus_2379#1      GCCCATTCCCAGAAACACAGTGTAGTACGTACAGAGTCGCTTAGGAGGAGGTGTATATAG 1375
                      ************************************************************

consensus_2379#0      TACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAA 1620
consensus_2379#1      TACACGTGCACTGTAGCTAATTCTTCGTGCATAGCATTAGTTTGACAGCAGGGTAGAAAA 1435
                      ************************************************************

consensus_2379#0      GAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGC 1680
consensus_2379#1      GAGGGCAAAGAAGCCGGCTAAACGTGGTTGTGATGGCACCAGACTTATAGGGAGCATCGC 1495
                      ************************************************************

consensus_2379#0      AACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAA 1740
consensus_2379#1      AACCACGAAATTTTGCTACTACTGCCGGCTTCAGTGACTACGACTAACCTCCTGTTGTAA 1555
                      ************************************************************

consensus_2379#0      GCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTT 1800
consensus_2379#1      GCTGTCTTAAAATCAGCCTTCGTTGTGTTAAGGGCAACCAAAGGTTGAGACTTTGTTGTT 1615
                      ************************************************************

consensus_2379#0      CTAATCAAACATCCTGTTTACAAATTGCAACTGGTGCCAGAATGAAATTTGTTCTCCGGG 1860
consensus_2379#1      CTAATCAAACATCCTGTTTACAAATTGCAACTGG-------------------------- 1649
                      **********************************                          

consensus_2379#0      TGGTATTGCACTGCACGAGGTTCGATTCTGTGACCCTGAAAGACGCATACTCAGATACTC 1920
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      TGATGCTCAGGTTTCAGATTCTGGGATGAATAAAATGCTACTAGTAGTATCATCTTCTTC 1980
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      TGGATCTGCAAACAGATGTTCAGTTAGCTGAAGATCCAGAGTACCACCTCGTTTGCTCAG 2040
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      GATGCAACAGGAAGGGTCTGCATCCAGGTGGGCTACCTGAAGTGGACGAAGCGGTCATCT 2100
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      TCGTGCCGCTGCTCGAGTGGCCTAGTGGGGACCCCGGCTGCGCCCGATGCCTCGGCCACT 2160
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      TTAAAAACTCGGATCGCGAGAGTTCCTGCACGCCATAAAAATGAGGAAAACGAGAAAGAA 2220
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      GGGAGGGCGTTCGCGTACACCCCCCTTTCAGCCCCACTTGCGCCCGCGCTCTCGTTGAGC 2280
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      CGTCTGCCTTTTGGGGTTCTAGAGTGAATAGGGTCGGCACGTTAGCGGCGAGCCGGCGAC 2340
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      GGGTAATGTGGTGTGCCAACAACTTTCAGCTGCTGCTGAAGTGAAGAGCAGGTGGCGATC 2400
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      AACCAGTCCCGGCACTGAACTACTGAACCTGAAGTGGTTACTCCATTCATCGACAGAGAT 2460
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      ATTTAATTATTTGTCACTTTTAGATGTAATATTTTACCACATAAACCTACAAATCATAAA 2520
consensus_2379#1      ------------------------------------------------------------
                                                                                  

consensus_2379#0      CATATAAGTGACAAATTATTTAACGCCACATCGAAAAATGGTAAATGCTTATTTGCCCCT 2580
consensus_2379#1      ------------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)