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Oryza sativa
cluster # 238 cluster # 238       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_238#0 length = 1134 sequences # 2  

consensusID : consensus_238#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1134
fasta sequence
                              [TCGTAATCTGCTCACTTCTTTTCTGAGCCATGGATATGCTTCTCTGTTTCGTGGAGATCTTCTCCATCCTTTGTTGCTGCATCATCTACTACTACCACCTTCAAACCAAGAAAGCAAGTGCTTCGGAGCCGACCGAATGGCCCGTGCTGGGTCATCTCTTCGGCATGTTCGCCAACATCCACCGCTTCCACGACTGGGCCACCGACATCCTCGCCGGCGGCATGGTGATATTCGACGCCAGCGAGCTCAAGAACCTGGTGTACCTGCAAGCGGCGCTGTCCGAGTGCCTGAGGCTGTACCCGTCGGTGCCGTTCGAGCACAAGGCGGTGGCCGCCGACGACGTGCTCCCGAGCGGGCACGAGATGAAGGCCGGAGACAAGGTACTCGTGTTCTCCTACTCCATGGGCAGGATGGAAGGCGTGTGGGGCAAGGACTGCACGGAGTTCCTGCCGGAGAGGTGGATCACCAGCGAAGGGAAGCTGCGGTACGAGCCGTCGTACAAGTTCTTCTCCTTCAACGCCGGCCCGAGGACGTGCCTCGGCAAGGAGCTGGCGTTCGTGCAGCTCAAGACCGTGGCGGCGGCCGTGATGTGGAACTTCGCCGTGGAGGTGGTGCCGGGGCACGCCGTCGAGCCGAAGCTGTCCATCATCCTGCACATGAAGAATGGGCTCGCTGTCACGGTCAAGAGGAGGGCCACCATGGCTAGCTGCTAGCTAGCTCATGAGTCATTAGCCATCAGCCATGGCTGGTTCCGTTCGTGACGTCCTCGTCAATGGCCGCAGCAACGTACGTCGTCAGCTAAACTTACAATGACCTAATGATCGTCATCGTATACCACATCATTTATGGTACCAGGACTAGAGCTACACGTAGGTGACACGTATCAGTATTTCATCAGTTCGTATACGTATGTAAGTGCCATCAAGTGTGTTTTCCTTTTAATGGTGTGTGTCCTTTTTTTTTTATTTAGAAAACGAACTGAGGCAACTGTGCCTCAGAGATGCTCGGGCCTCTCCTATGCACTATGCATGCTTGCATAGCTTATAGCCGTATATTGGCTATGTATAGGTTGGTGTGTCCCTGTTAGTGATTATCTGTTTGTTTCGGTTTTATGCGGCTAGTTGCTTTGCATTT]

[+] EMBL AK061292             [TCGTAATCTGCTCACTTCTTTTCTGAGCCATGGATATGCTTCTCTGTTTCGTGGAGATCTTCTCCATCCTTTGTTGCTGCATCATCTACTACTACCACCTTCAAACCAAGAAAGCAAGTGCTTCGGAGCCGACCGAATGGCCCGTGCTGGGTCATCTCTTCGGCATGTTCGCCAACATCCACCGCTTCCACGACTGGGCCACCGACATCCTCGCCGGCGGCATGGTGATATTCGACGCCAGCGAGCTCAAGAACCTGGTGTACCTGCAAGCGGCGCTGTCCGAGTGCCTGAGGCTGTACCCGTCGGTGCCGTTCGAGCACAAGGCGGTGGCCGCCGACGACGTGCTCCCGAGCGGGCACGAGATGAAGGCCGGAGACAAGGTACTCGTGTTCTCCTACTCCATGGGCAGGATGGAAGGCGTGTGGGGCAAGGACTGCACGGAGTTCCTGCCGGAGAGGTGGATCACCAGCGAAGGGAAGCTGCGGTACGAGCCGTCGTACAAGTTCTTCTCCTTCAACGCCGGCCCGAGGACGTGCCTCGGCAAGGAGCTGGCGTTCGTGCAGCTCAAGACCGTGGCGGCGGCCGTGATGTGGAACTTCGCCGTGGAGGTGGTGCCGGGGCACGCCGTCGAGCCGAAGCTGTCCATCATCCTGCACATGAAGAATGGGCTCGCTGTCACGGTCAAGAGGAGGGCCACCATGGCTAGCTGCTAGCTAGCTCATGAGTCATTAGCCATCAGCCATGGCTGGTTCCGTTCGTGACGTCCTCGTCAATGGCCGCAGCAACGTACGTCGTCAGCTAAACTTACAATGACCTAATGATCGTCATCGTATACCACATCATTTATGGTACCAGGACTAGAGCTACACGTAGGTGACACGTATCAGTATTTCATCAGTTCGTATACGTATGTAAGTGCCATCAAGTGTGTTTTCCTTTTAATGGTGTGTGTCCTTTTTTTTTTATTTAGAAAACGAACTGAGGCAACTGTGCCTCAGAGATGCTCGGGCCTCTCCTATGCACTATGCATGCTTGCATAGCTTATAGCCGTATATTGGCTATGTATAGGTTGGTGTGTCCCTGTTAGTGATTATCTGTTTG                                 ]
[-] EMBL CB649814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACCAGGACTAGAGCTACACGTAGGTGACACGTATCAGTATTTCATCAGTTCGTATACGTATGTAAGGGCCATCAAGTGGGTTTTCCTTTTAATGGCGTGTGTCCTTTTTTTTTTATTTAGAAAACGAAGTGAGGCAACTGTGCCTCAGAGATGCTCGGGCCTTTCTTATGCACTATGCATGCTTGCATAGCTTATAGCCGTATATTGGCTATGTATAGGTTGTTGTGTCCCTGTTAGTGATTATCTGTTGGTTTCGGTTTTATGCGGCTAGTTGCTTTGCATTT]


>consensus_238#0 TCGTAATCTGCTCACTTCTTTTCTGAGCCATGGATATGCTTCTCTGTTTCGTGGAGATCT TCTCCATCCTTTGTTGCTGCATCATCTACTACTACCACCTTCAAACCAAGAAAGCAAGTG CTTCGGAGCCGACCGAATGGCCCGTGCTGGGTCATCTCTTCGGCATGTTCGCCAACATCC ACCGCTTCCACGACTGGGCCACCGACATCCTCGCCGGCGGCATGGTGATATTCGACGCCA GCGAGCTCAAGAACCTGGTGTACCTGCAAGCGGCGCTGTCCGAGTGCCTGAGGCTGTACC CGTCGGTGCCGTTCGAGCACAAGGCGGTGGCCGCCGACGACGTGCTCCCGAGCGGGCACG AGATGAAGGCCGGAGACAAGGTACTCGTGTTCTCCTACTCCATGGGCAGGATGGAAGGCG TGTGGGGCAAGGACTGCACGGAGTTCCTGCCGGAGAGGTGGATCACCAGCGAAGGGAAGC TGCGGTACGAGCCGTCGTACAAGTTCTTCTCCTTCAACGCCGGCCCGAGGACGTGCCTCG GCAAGGAGCTGGCGTTCGTGCAGCTCAAGACCGTGGCGGCGGCCGTGATGTGGAACTTCG CCGTGGAGGTGGTGCCGGGGCACGCCGTCGAGCCGAAGCTGTCCATCATCCTGCACATGA AGAATGGGCTCGCTGTCACGGTCAAGAGGAGGGCCACCATGGCTAGCTGCTAGCTAGCTC ATGAGTCATTAGCCATCAGCCATGGCTGGTTCCGTTCGTGACGTCCTCGTCAATGGCCGC AGCAACGTACGTCGTCAGCTAAACTTACAATGACCTAATGATCGTCATCGTATACCACAT CATTTATGGTACCAGGACTAGAGCTACACGTAGGTGACACGTATCAGTATTTCATCAGTT CGTATACGTATGTAAGTGCCATCAAGTGTGTTTTCCTTTTAATGGTGTGTGTCCTTTTTT TTTTATTTAGAAAACGAACTGAGGCAACTGTGCCTCAGAGATGCTCGGGCCTCTCCTATG CACTATGCATGCTTGCATAGCTTATAGCCGTATATTGGCTATGTATAGGTTGGTGTGTCC CTGTTAGTGATTATCTGTTTGTTTCGGTTTTATGCGGCTAGTTGCTTTGCATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)