cluster # 2396

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Oryza sativa
cluster # 2396 cluster # 2396 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2396#0 length = 1139 sequences # 2

consensusID : consensus_2396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1139
fasta sequence

                              [ATCATGAACCACATGTTTATTTTTAATTTCACAGAACAAATCAAGAAGGCTAGGGACTCTTCCAAACACTGTAGAAGGAAGCGAAGGGAGAGCAATGGCCAGGATACCAAAACCTGGAAGGAAATAACTAAAGGTTGGTGCAAATAAAGGGACCACTCTCAAGAAGAAAACAAAATGGTACTACTACAGCTCTAATGCCTTGTCTGCTCAACATTCTCCCCAGTGGACTGAAAATCTGCTGTACAATGCACACATTTCTTGAACCAACCAATTCTCTATCTGTTCAAATGCTCAGCAATGACCCAACTGTGAATTGTTCCAGTAAAAGAAACAAGGAAATGAGAACTTCTGCATCATTGTCCAGTATCAGGGCTTCCAAGTCATGTTGAGTGTCTTTTTCTTCAATAGCTATTAGCTAAGCCCCTAATTTTGTAATTGGCCCAAATGGAAGTGTTTTTCGCAACTGTGGACCCATCTGAGTGCAGACCGATGTCTTGGAGTGTGTCCTATCTGATCCTACTTTTCAGCATCTTTGCGCCTTTATGATCACAACTTAGCAGGTAATCACTTTCAGCATCTAGATTGATGCACGCAGGAGGAGCACATAAAAAAAATCTGCATATTGTCCCACACACACCAATTGATGACTTCGTGTTATAATAACAAGAGAACCAAGTAATCCACACTAATTCCAAGCATGTGCAACAAAAATATAAAGTTAGAGCACAAAGGGCTAAAGGAGGCTTCTGATGTCTGTTATTTGCCCCTGCGCACAGCCGAGACGAGCGATTTCCAGGTCACTGGTGAAAATGATGGCAAAGGGGAGCCATGAGAGCACTGTGGCCACAAGGATATTAACATCTGTTCCTCATCATACATCTGAGATTCTGAACAATCATAAGCACCAAGTTCTATAGCCTGAGAATTCTAAATAACCATTTCCATGAAACTGGGGAGCTTCTATACAAAAAAGCTTTATCATGTTTTCTGTAACTGTAATGCCTATATAATGCCTTCCAGTTAGTAAGAACAGCATATCAGACTACTTTTCTAGCATCAAGTCATTTTCTAAAAAAGTTGTAAAAAAAAATCAAGGCAAATAGAAACAAACTGCAATGAAGCTTATAATACTGTATGGT]

[+] EMBL CB662153             [ATCATGAACCACATGTTTATTTTTAATTTCACAGAACAAATCAAGAAGGCTAGGGACTCTTCCAAACACTGTAGAAGGAAGCGAAGGGAGAGCAATGGCCAGGATACCAAAACCTGGAAGGAAATAACTAAAGGTTGGTGCAAATAAAGGGACCACTCTCAAGAAGAAAACAAAATGGTACTACTACAGCTCTAATGCCTTGTCTGCTCAACATTCTCCCCAGTGGACTGAAAATCTGCTGTACAATGCACACATTTCTTGAACCAACCAATTCTCTATCTGTTCAAATGCTCAGCAATGACCCAACTGTGAATTGTTCCAGTAAAAGAAACAAGGAAATGAGAACTTCTGCATCATTGTCCAGTATCAGGGCTTCCAAGTCATGTTGAGTGTCTTTTTCTTCAATAGCTATTAGCTAAGCCCCTAATTTTGTAATTGGCCCAAATGGAAGTGTTTTTCGCAACTGTGGACCCATCTGAGTGCAGACCGATGTCTTGGAGTGTGTCCTATCTGATCCTACTTTTCAGCATCTTTGCGCCTTTATGATCACAACTTAGCAGGTAATCACTTTCAGCATCTAGATTGATGCACGCAGGAGGAGCACATAAAAAAAATCTGCATATTGTCCCACACACACCAATTGATGACTTCGTGTTATAATAACAAGAGAACCAAGTAATCCACACTAATTCCAAGCATGTGCAACAAAAATATAAAGTTAGAGCACAAAGGGCTAAAGGAGGCTTCTGATGTCTGTTATTTGCCCCTGCGCACAGCCGAGACGAGCGATTTCCAGGTCACTGGTGA                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB662152             [                                                                                                                                                                                                                                                                                                                                                                        CCAGTATCAGTGCTTCCAAGTCATGTTGAGTGTCTTTTTCTTCAATAGCTATTAGCTAAGCCCCTAATTTTGTAATTGGCCCAAATGGAAGTGTTTTTCGCAACTGTGGACCCATCTGAGTGCAGACCGATGTCTTGGAGTGTGTCCTATCTGATCCTACTTTTCAGCATCTTTGTGCCTTTATGATCACAACTTAGCAGGTAATCACTTTCAGCATCTAGATTGATGCACGCAGGAGGAGCACATAAAAAAAATCTGCATATTGTCCCACACACACCAATTGATGACTTCATGTTATAATAACAAGAGAACCAAGTAATCCACACTAATTCCAAGCATGTGCAACAAAAATATAAAGTTAGAGCACAAAGGGCTAAAGGAGGCTTCTGATGTCTGTTATTTGCCCCTGCGCACAGCCGAGACGAGCGATTTCCAGGTCACTGGTGAAAATGATGGCAAAGGGGAGCCATGAGAGCACTGTGGCCACAAGGATATTAACATCTGTTCCTCATCATACATCTGAGATTCTGAACAATCATAAGCACCAAGTTCTATAGCCTGAGAATTCTAAATAACCATTTCCATGAAACTGGGGAGCTTCTATACAAAAAAGCTTTATCATGTTTTCTGTAACTGTAATGCCTATATAATGCCTTCCAGTTAGTAAGAACAGCATATCAGACTACTTTTCTAGCATCAAGTCATTTTCTAAAAAAGTTGTAAAAAAAAATCAAGGCAAATAGAAACAAACTGCAATGAAGCTTATAATACTGTATGGT]




>consensus_2396#0
ATCATGAACCACATGTTTATTTTTAATTTCACAGAACAAATCAAGAAGGCTAGGGACTCT
TCCAAACACTGTAGAAGGAAGCGAAGGGAGAGCAATGGCCAGGATACCAAAACCTGGAAG
GAAATAACTAAAGGTTGGTGCAAATAAAGGGACCACTCTCAAGAAGAAAACAAAATGGTA
CTACTACAGCTCTAATGCCTTGTCTGCTCAACATTCTCCCCAGTGGACTGAAAATCTGCT
GTACAATGCACACATTTCTTGAACCAACCAATTCTCTATCTGTTCAAATGCTCAGCAATG
ACCCAACTGTGAATTGTTCCAGTAAAAGAAACAAGGAAATGAGAACTTCTGCATCATTGT
CCAGTATCAGGGCTTCCAAGTCATGTTGAGTGTCTTTTTCTTCAATAGCTATTAGCTAAG
CCCCTAATTTTGTAATTGGCCCAAATGGAAGTGTTTTTCGCAACTGTGGACCCATCTGAG
TGCAGACCGATGTCTTGGAGTGTGTCCTATCTGATCCTACTTTTCAGCATCTTTGCGCCT
TTATGATCACAACTTAGCAGGTAATCACTTTCAGCATCTAGATTGATGCACGCAGGAGGA
GCACATAAAAAAAATCTGCATATTGTCCCACACACACCAATTGATGACTTCGTGTTATAA
TAACAAGAGAACCAAGTAATCCACACTAATTCCAAGCATGTGCAACAAAAATATAAAGTT
AGAGCACAAAGGGCTAAAGGAGGCTTCTGATGTCTGTTATTTGCCCCTGCGCACAGCCGA
GACGAGCGATTTCCAGGTCACTGGTGAAAATGATGGCAAAGGGGAGCCATGAGAGCACTG
TGGCCACAAGGATATTAACATCTGTTCCTCATCATACATCTGAGATTCTGAACAATCATA
AGCACCAAGTTCTATAGCCTGAGAATTCTAAATAACCATTTCCATGAAACTGGGGAGCTT
CTATACAAAAAAGCTTTATCATGTTTTCTGTAACTGTAATGCCTATATAATGCCTTCCAG
TTAGTAAGAACAGCATATCAGACTACTTTTCTAGCATCAAGTCATTTTCTAAAAAAGTTG
TAAAAAAAAATCAAGGCAAATAGAAACAAACTGCAATGAAGCTTATAATACTGTATGGT

clustalw multiple alignements is not computed in this case