cluster # 24

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Oryza sativa
cluster # 24 cluster # 24 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_24#0 length = 1834 sequences # 2
consensusID : consensus_24#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1834
fasta sequence
                              [TTCAGAAGCTCCTTTGCTGAGACAGATTTCCGAGTAGCCGGCGAACGCTTTGCCTTGCTCGCTGTGTAGCTAGCGGAGGGCTTGGAGCGATCGAGCGATCGAGCGCGTTTGCACGGGGCTAAGCGTGGAGGAGAGGCCGGTGGTGAGCCAGCAGCTGTGCAGGCAGCCAGGCAGGCAGCAAGCTAGCGGCCGGCTAGTCGATCGCGCGCGGCTCCCCGCGCAATGGCGGCAGGGACAGAGGCGGCGCGGGACTACGGCGGCGGCGTGACGGCCAGCGTCGTGGTGACCTGCCTCATCGCCGCCTCCTGCGGCCTCATCTTCGGTTACGACATTGGCGTCTCAGGTGGTGTGACGCAGATGCAATCGTTCCTGACCAAGTTCTTCCCGGAGGTGGTGAAGGGGATGCGTGGCGCGAAGCGGGACGCCTACTGCAGGTACGACAACCAGGTCCTGACGGCGTTCACCTCGTCGCTGTACATCGCCGGCGCGGTGGCGTCGCTGGTGGCGAGCCGGGTGACCAGGATGGTGGGCCGCCAGGCCATCATGCTGACCGGCGGCGCCCTCTTCCTCGCCGGCTCCGCCTTCAACGCTGGCGCCGTCAACATCGCCATGCTCATCATCGGCCGCATTCTGCTCGGCGTCGGCGTCGGCTTCACCACGCAGGCGGCTCCGCTGTATCTCGCCGAGACAGCGCCGGCGAGGTGGCGCGGGGCGTTCACCGCCGCGTACCATATCTTCCTCGTCATCGGCACGGTGGCCGCGACGGCCGCCAACTACTTCACGGACCGAATCCCGGGCTGGGGGTGGCGCGTCTCGCTGGGCCTCGCGGCGGTGCCGGCCACGGTCATCGTGGTGGGCGCGCTCTTCGTCCCGGACACGCCCGCTAGCCTCGTCCTGCGCGGGCACACGGAGAAGGCCCGCGCGTCGCTCCAGCGCGTCCGCGGCGCGGACGCCGACGTCGACGCCGAGTTCAAGGACATCATCCGCGCCGTCGAGGAGGCGCGGCGGAACGACGAGGGCGCGTTCCGGAGGCTGCGTGGCCGTGGGTACCGGCACTACCTGGTGATGGTGGTGGCCATCCCGACATTCTTCGACCTCACCGGCATGGTCGTCATCGCCGTCTTCTCGCCGGTGCTGTTCCGGACGCTCGGGTTCAACAGCCAGAGGGCCATCCTTGCCTCCATCGTACTTACCCTCGTCAACTTGTGCGCCGTCGTCGTGTCTTCCTTCACCGTCGACCGCGTCGGCCGCAGGTTCTTGTTCCTCGCCGGCGGCACCGCCATGCTCCTCTGCCAGGTGGCGGTGGCGTGGATACTGGCGGAGCATCTCGGGAGGAGCCACGCGGCGGCGACGATGGCGAAGAGCTACGCGGCGGGGGTGGTGGCGCTGATGTGCGTGTACACGGCGAGCCTCGGCCTGTCATGGGGACCGCTCAAGTGGGTGGTGCCGAGCGAGCATCTACCCGGCTGGAGGCTCCGGCTCGGCGGGGCAGGCGCTGGGCCTGTCCGTCTCGCTCACGCTCTCCTTCGCGCAGACGCAGGTGTTCATGTCCATGGCTCTGCGCCATGAAGTACGCCATCTTCCTCTTCTACGCCGGCTGGGTCCTCGCCATGGCGGCCTTCATCGCGCTGTTCCTCCCGGAGACCAAGGGCGTCCCACTGGAGGCCATGCGCGCGGTGTGGGCGAAGCACTGGTAGCTGGAAGCGGTTCGCCATGGACGCCAAGCTGGACGCCCAAGTGAACTGCCTCTAAGACTGTCATTGTTACAGCGGTGTGCGCGCGCGGGAAACGATTCTAAACTCTCGACGAGACATCCCTGTGTCTATATGGTATC]

[+] EMBL AK121306             [TTCAGAAGCTCCTTTGCTGAGACAGATTTCCGAGTAGCCGGCGAACGCTTTGCCTTGCTCGCTGTGTAGCTAGCGGAGGGCTTGGAGCGATCGAGCGATCGAGCGCGTTTGCACGGGGCTAAGCGTGGAGGAGAGGCCGGTGGTGAGCCAGCAGCTGTGCAGGCAGCCAGGCAGGCAGCAAGCTAGCGGCCGGCTAGTCGATCGCGCGCGGCTCCCCGCGCAATGGCGGCAGGGACAGAGGCGGCGCGGGACTACGGCGGCGGCGTGACGGCCAGCGTCGTGGTGACCTGCCTCATCGCCGCCTCCTGCGGCCTCATCTTCGGTTACGACATTGGCGTCTCAGGTGGTGTGACGCAGATGCAATCGTTCCTGACCAAGTTCTTCCCGGAGGTGGTGAAGGGGATGCGTGGCGCGAAGCGGGACGCCTACTGCAGGTACGACAACCAGGTCCTGACGGCGTTCACCTCGTCGCTGTACATCGCCGGCGCGGTGGCGTCGCTGGTGGCGAGCCGGGTGACCAGGATGGTGGGCCGCCAGGCCATCATGCTGACCGGCGGCGCCCTCTTCCTCGCCGGCTCCGCCTTCAACGCTGGCGCCGTCAACATCGCCATGCTCATCATCGGCCGCATTCTGCTCGGCGTCGGCGTCGGCTTCACCACGCAGGCGGCTCCGCTGTATCTCGCCGAGACAGCGCCGGCGAGGTGGCGCGGGGCGTTCACCGCCGCGTACCATATCTTCCTCGTCATCGGCACGGTGGCCGCGACGGCCGCCAACTACTTCACGGACCGAATCCCGGGCTGGGGGTGGCGCGTCTCGCTGGGCCTCGCGGCGGTGCCGGCCACGGTCATCGTGGTGGGCGCGCTCTTCGTCCCGGACACGCCCGCTAGCCTCGTCCTGCGCGGGCACACGGAGAAGGCCCGCGCGTCGCTCCAGCGCGTCCGCGGCGCGGACGCCGACGTCGACGCCGAGTTCAAGGACATCATCCGCGCCGTCGAGGAGGCGCGGCGGAACGACGAGGGCGCGTTCCGGAGGCTGCGTGGCCGTGGGTACCGGCACTACCTGGTGATGGTGGTGGCCATCCCGACATTCTTCGACCTCACCGGCATGGTCGTCATCGCCGTCTTCTCGCCGGTGCTGTTCCGGACGCTCGGGTTCAACAGCCAGAGGGCCATCCTTGCCTCCATCGTACTTACCCTCGTCAACTTGTGCGCCGTCGTCGTGTCTTCCTTCACCGTCGACCGCGTCGGCCGCAGGTTCTTGTTCCTCGCCGGCGGCACCGCCATGCTCCTCTGCCAGGTGGCGGTGGCGTGGATACTGGCGGAGCATCTCGGGAGGAGCCACGCGGCGGCGACGATGGCGAAGAGCTACGCGGCGGGGGTGGTGGCGCTGATGTGCGTGTACACGGCGAGCCTCGGCCTGTCATGGGGACCGCTCAAGTGGGTGGTGCCGAGCGAGCATCTACCCGGCTGGAGGCTCCGGCTCGGCGGGGCAGGCGCTGGGCCTGTCCGTCTCGCTCACGCTCTCCTTCGCGCAGACGCAGGTGTTCATGTCCATGGCTCTGCGCCATGAAGTACGCCATCTTCCTCTTCTACGCCGGCTGGGTCCTCGCCATGGCGGCCTTCATCGCGCTGTTCCTCCCGGAGACCAAGGGCGTCCCACTGGAGGCCATGCGCGCGGTGTGGGCGAAGCACTGGTAGCTGGAAGCGGTTCGCCATGGACGCCAAGCTGGACGCCCAAGTGAACTGCCTCTAAGACTGTCATTGTTACAGCGGTGTGCGCGCGCGGGAAACGATTCTAAACTCTCGACGAGACATCCCTGTGTCTATATGGTATC]
[+] EMBL AI978521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGGCTGGGTCCTCGCCATGACGGCCTTCATCGCGCTGTTCCTCCCGGAGACCAAGGGCGTCCCACTGGAGGCCATGCGCGCGGTGTGGGCGAAGCACTGGTA CTGGAAGCGGTTCGCCATGGACGCCAAGCTGGACGCCCAAGTGAACTGCCTCTAAGACTGTCATTGTTACAGCGGTGTGCGCGCGCGGAAAACGATTCTAAACTCTCGACGAGACATCCCTGTGTCTATATGGTATC]




>consensus_24#0
TTCAGAAGCTCCTTTGCTGAGACAGATTTCCGAGTAGCCGGCGAACGCTTTGCCTTGCTC
GCTGTGTAGCTAGCGGAGGGCTTGGAGCGATCGAGCGATCGAGCGCGTTTGCACGGGGCT
AAGCGTGGAGGAGAGGCCGGTGGTGAGCCAGCAGCTGTGCAGGCAGCCAGGCAGGCAGCA
AGCTAGCGGCCGGCTAGTCGATCGCGCGCGGCTCCCCGCGCAATGGCGGCAGGGACAGAG
GCGGCGCGGGACTACGGCGGCGGCGTGACGGCCAGCGTCGTGGTGACCTGCCTCATCGCC
GCCTCCTGCGGCCTCATCTTCGGTTACGACATTGGCGTCTCAGGTGGTGTGACGCAGATG
CAATCGTTCCTGACCAAGTTCTTCCCGGAGGTGGTGAAGGGGATGCGTGGCGCGAAGCGG
GACGCCTACTGCAGGTACGACAACCAGGTCCTGACGGCGTTCACCTCGTCGCTGTACATC
GCCGGCGCGGTGGCGTCGCTGGTGGCGAGCCGGGTGACCAGGATGGTGGGCCGCCAGGCC
ATCATGCTGACCGGCGGCGCCCTCTTCCTCGCCGGCTCCGCCTTCAACGCTGGCGCCGTC
AACATCGCCATGCTCATCATCGGCCGCATTCTGCTCGGCGTCGGCGTCGGCTTCACCACG
CAGGCGGCTCCGCTGTATCTCGCCGAGACAGCGCCGGCGAGGTGGCGCGGGGCGTTCACC
GCCGCGTACCATATCTTCCTCGTCATCGGCACGGTGGCCGCGACGGCCGCCAACTACTTC
ACGGACCGAATCCCGGGCTGGGGGTGGCGCGTCTCGCTGGGCCTCGCGGCGGTGCCGGCC
ACGGTCATCGTGGTGGGCGCGCTCTTCGTCCCGGACACGCCCGCTAGCCTCGTCCTGCGC
GGGCACACGGAGAAGGCCCGCGCGTCGCTCCAGCGCGTCCGCGGCGCGGACGCCGACGTC
GACGCCGAGTTCAAGGACATCATCCGCGCCGTCGAGGAGGCGCGGCGGAACGACGAGGGC
GCGTTCCGGAGGCTGCGTGGCCGTGGGTACCGGCACTACCTGGTGATGGTGGTGGCCATC
CCGACATTCTTCGACCTCACCGGCATGGTCGTCATCGCCGTCTTCTCGCCGGTGCTGTTC
CGGACGCTCGGGTTCAACAGCCAGAGGGCCATCCTTGCCTCCATCGTACTTACCCTCGTC
AACTTGTGCGCCGTCGTCGTGTCTTCCTTCACCGTCGACCGCGTCGGCCGCAGGTTCTTG
TTCCTCGCCGGCGGCACCGCCATGCTCCTCTGCCAGGTGGCGGTGGCGTGGATACTGGCG
GAGCATCTCGGGAGGAGCCACGCGGCGGCGACGATGGCGAAGAGCTACGCGGCGGGGGTG
GTGGCGCTGATGTGCGTGTACACGGCGAGCCTCGGCCTGTCATGGGGACCGCTCAAGTGG
GTGGTGCCGAGCGAGCATCTACCCGGCTGGAGGCTCCGGCTCGGCGGGGCAGGCGCTGGG
CCTGTCCGTCTCGCTCACGCTCTCCTTCGCGCAGACGCAGGTGTTCATGTCCATGGCTCT
GCGCCATGAAGTACGCCATCTTCCTCTTCTACGCCGGCTGGGTCCTCGCCATGGCGGCCT
TCATCGCGCTGTTCCTCCCGGAGACCAAGGGCGTCCCACTGGAGGCCATGCGCGCGGTGT
GGGCGAAGCACTGGTAGCTGGAAGCGGTTCGCCATGGACGCCAAGCTGGACGCCCAAGTG
AACTGCCTCTAAGACTGTCATTGTTACAGCGGTGTGCGCGCGCGGGAAACGATTCTAAAC
TCTCGACGAGACATCCCTGTGTCTATATGGTATC
clustalw multiple alignements is not computed in this case