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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3515 fasta sequence
[TCCCCCTCGGGCACGCGGCGATGTTTCCCATTATTTCCAGCCTCCGCCGACACAACGCTACCGCAGACCCATCCCCAATTCCCCATTTCCCATCCAGGAGAGAAAACCGAGCGATCTCGCTCTGACCTCCGAGAGGCACCATTGAGGAGATGGCGGAAGTGAGCGCGGCAATGGGGTCAAATCGTTCCGTCCGCAAGAAGCTTGCGGCGTTGCTGTCCGACGAGCGCAAGGATTTCATACGGGTGCGTAGCAAGGTAAAGCCTCTGATTGATGCTCTTGAATCTGTCCATGCCTGCTTTGAGAAATTGTCGCTCGAAGATGAGAAGAATCTTGATGCGTTACAAGAAGCCTGGATGATGGATTTACGGGAGCTGTCCTATGACATGGAGGATAGTCTTGACAGGTTTCTTGTCAAATCTGCTGCTGAACCGGGTAGCTGTAAGAAGCTCTTCAAGATCTTGTTAACGAAGATCAAGGGTAGCACCAATGGGATTGTTAAGGTGATCCAAGATATCAAGATGCCAGTCGAGGAGCTCAACGAAAGGATGAACAGATTCAAGCTCAGTGATGACCGTCATGTAACATACGACCCGATCAAGATCGACTCAAGGGTAACAGCTTTATATGTGGACGCTTCACATCTTGTAGGTCTGGATGGGCCAAAACTAGAACTAATTAAGATGTTGCGCATTGAAGATGAACCTGAACCATCAAAGAAGCTGGTGGTGGTCTCTATTGTTGGTCTTGGAGGATTGGGCAAGACAACTCTAGCAAACCAAGTCTATCATCATCTCAAGCCGGAGTTCGACTGCTCTGCTTTCGTATCAGTGGGACAAAATCCTGATGTTCTAAAGATCTTGGATAATATCCTTAGTGGACTCACCCATCAACCTTATGCCACCACCGGGTCAACAGTGCAAGTACTCGTTGAGAAAACCAGAAGATTCATCGCGGACAAAAGGTACCTTGTTCTTCTTGATGACATCTGGAATGCAAGAGATTGGGATATATTGAGGTGTTCTCTGCCTAACAATCACTTAGGCAGCAGAATAATAACAACAACACGCATTGTCGATGTTGCTAGATCATGTTGCAGCCACAAAGAGGATCACATCTACAAAATGGGTCCTCTGAGTGATTTGGATTCGCAGAGACTATTTTTTAGAAGAATATTCGGCTCAGATGATGGTTGTCCGACTCAACTTAAAAGGATTTCCATGGACATATTGAAAAGGTGTCGAGGTTTGCCATTGGCTACACTTACTTTAGCTAGTATTCTAGCCGACGTACCCATGTTAGCAGAAAAATGGAAGCAAGTGCATAATTCTATTGGTTTGGCAACTCCAGGGGAGAATATGAATCGTATATTATCTTTGAGTTTCCATGACCTCCCTAATCATTTAAAGACATGTTTATTGTATTTAAGCATATTTCCAGAAGATTATGTAATTGAGAGAGAACAGTTAGTATGGAGATGGATAGCTGAAGGTTTCATTCCTGAAACACGTGGCATTCCTTTAGAGGGAGTCGGAAGTGCATACTTTAATGAGCTTATCAATCGAAGTATGATTCAGCCTGCTGATGTTCAATATGATGGAACAGTGCAAAGTTGCAGAGTTCATGACATGATACTTGAGCTTATTGTGTCAATATCAACCAAGATTAACTTTGTTGCCGTACTACATAAAGATCAAGATGAAACGAGATTTACAGATTACAAGACCAAGGTTCGCCGGTTAGCCCACCAGTCCAACTGTATTGAGAAATTATTGGAACGGATGAGCAGGGATGACTTGTCTCATATTCGCTCTATCATCTCCTTCGATTATGTCAAAGGAATACCTCATCTTGGTGATTTCCAAGCACTGCGGGTGTTGGATTTAGGATCTTGTAGATCAATTGAAAACCACCATATTGAGAATCTAGAGATGTTGTACCAACTCAAGTATTTGGATCTAAGCCGTACAAGCATCAGTGAGCTTCCAATGCAGATAGATAATCTCAGGTATTTGGAAACACTAGATCTTCGAGGGTGTGCCATAGAAAAATTGCCAGCCAGTACTGTTAGATTACAAAACATGCAACGCCTGCTTGTTAACAGAAGTGTAAAATTTCCTGATGAAATTGGACACATGCAGGCCTTACAGACGTTGTTGTTTGTCTCAATGTCCTGTAACTCCATCAAATTTGTGGAAGAGCTCAGCAAGCTGATCAAAATGAGGGTACTCAACATAACTTTCTCTAAACCTGTTGACATGGTTGATGAAGTAAGGAAGTACACAGATTCTTTGGTCTCATCACTCAACGAGTTGTTCAACCTTGAATCTCTAAAGATTGATCCTGAAGAAGGTTGTTCCCTGGACTCACTAATGGGAGTGTACCTAACTTTTGGCTGTCTCAAAAAACTTGTCATTGGCTACATTTCTAGGATCCCAAAATGGATCAACCCATCTATGTACAATCTAGTCCACCTGGAACTGAAAGTTGACATTGTGCGAGAGGAAGATCTCCATTCTCTTGAACTCTTGCCCTGCCTGCTATATCTTCAGCTGGAAATGACAGATGGCTCCAGCAAAATGCTCACTGTTGGCAGCGAGGGATTCCGATGCTTAAGAGAGTCGCAATTCATATGGAAGAATGATGGGATGGGACTAGTGTTTCTAGAAGGTGCCATGCCAGAGCTTCAAACATTGCATCTTTACTTCAGAACTCACGAAACAATAGCCAATTATTCTGGTGTTGATGGCAATGGCATCGAGAATCTTTCGCGCCTCAAAAAACTCTGCGTTGATGTTGATTGTAGTGGTTCAACTAGGGAGGAGGTTGAGGCTGCGGAGGATTCCATCAGGAAAGCAGCAGATAGGCATAGAACCAAACTCACTCTTGAAATCCGAAGATGGTGTGAAGCATGCATGATAGAGGAAGAAGCACATGATGGTAATGCGGAATTTCCAAGCAGATCCGTGAATAGGAGAGCAAATCCAGTCAGAGTTGCCTTCAGGGTGAGGGCAGATCGGAGAAACAGGAATAGGACTAGGAGAAATAGAATCACTGCACCATCCGCATCAACTTAGGGTGATAACTGAAGGAGATTATGATTCATGAGGTTCATTCTTATGAGTGTTCTGAGTCTGAATTCTGAAAAGACCATCAAATACAGAGGAAAAAAGATGCTGTAATCTTGTATCGATTGGTTCCGTTTATATATCGATTTGTCAGTGATGCATTTTTTGACCTGTACACTCAAGATCAAGAAGGAAGTCACGAAGCATTAGAATTCAGAACTCAGAAGTGAACCAAATGAAGATAAGCCTTCAGTGCATAGGTGTCCTTGCAAATGGATGCAGATTGAGCATTTTCATCAGACCGATTACAATCAGAAGGATATTATATGTTCGTGTTATAAGAAGGCACGGTCTGTGCCAGAAATACCAGTACATAGATATTCTTTTGGTGTGATTTGCTTTTCTATTGGAGAATGCACTTATTTGAATTTGTGATAATAAATATATGAC]
[+] EMBL AK103311 [TCCCCCTCGGGCACGCGGCGATGTTTCCCATTATTTCCAGCCTCCGCCGACACAACGCTACCGCAGACCCATCCCCAATTCCCCATTTCCCATCCAGGAGAGAAAACCGAGCGATCTCGCTCTGACCTCCGAGAGGCACCATTGAGGAGATGGCGGAAGTGAGCGCGGCAATGGGGTCAAATCGTTCCGTCCGCAAGAAGCTTGCGGCGTTGCTGTCCGACGAGCGCAAGGATTTCATACGGGTGCGTAGCAAGGTAAAGCCTCTGATTGATGCTCTTGAATCTGTCCATGCCTGCTTTGAGAAATTGTCGCTCGAAGATGAGAAGAATCTTGATGCGTTACAAGAAGCCTGGATGATGGATTTACGGGAGCTGTCCTATGACATGGAGGATAGTCTTGACAGGTTTCTTGTCAAATCTGCTGCTGAACCGGGTAGCTGTAAGAAGCTCTTCAAGATCTTGTTAACGAAGATCAAGGGTAGCACCAATGGGATTGTTAAGGTGATCCAAGATATCAAGATGCCAGTCGAGGAGCTCAACGAAAGGATGAACAGATTCAAGCTCAGTGATGACCGTCATGTAACATACGACCCGATCAAGATCGACTCAAGGGTAACAGCTTTATATGTGGACGCTTCACATCTTGTAGGTCTGGATGGGCCAAAACTAGAACTAATTAAGATGTTGCGCATTGAAGATGAACCTGAACCATCAAAGAAGCTGGTGGTGGTCTCTATTGTTGGTCTTGGAGGATTGGGCAAGACAACTCTAGCAAACCAAGTCTATCATCATCTCAAGCCGGAGTTCGACTGCTCTGCTTTCGTATCAGTGGGACAAAATCCTGATGTTCTAAAGATCTTGGATAATATCCTTAGTGGACTCACCCATCAACCTTATGCCACCACCGGGTCAACAGTGCAAGTACTCGTTGAGAAAACCAGAAGATTCATCGCGGACAAAAGGTACCTTGTTCTTCTTGATGACATCTGGAATGCAAGAGATTGGGATATATTGAGGTGTTCTCTGCCTAACAATCACTTAGGCAGCAGAATAATAACAACAACACGCATTGTCGATGTTGCTAGATCATGTTGCAGCCACAAAGAGGATCACATCTACAAAATGGGTCCTCTGAGTGATTTGGATTCGCAGAGACTATTTTTTAGAAGAATATTCGGCTCAGATGATGGTTGTCCGACTCAACTTAAAAGGATTTCCATGGACATATTGAAAAGGTGTCGAGGTTTGCCATTGGCTACACTTACTTTAGCTAGTATTCTAGCCGACGTACCCATGTTAGCAGAAAAATGGAAGCAAGTGCATAATTCTATTGGTTTGGCAACTCCAGGGGAGAATATGAATCGTATATTATCTTTGAGTTTCCATGACCTCCCTAATCATTTAAAGACATGTTTATTGTATTTAAGCATATTTCCAGAAGATTATGTAATTGAGAGAGAACAGTTAGTATGGAGATGGATAGCTGAAGGTTTCATTCCTGAAACACGTGGCATTCCTTTAGAGGGAGTCGGAAGTGCATACTTTAATGAGCTTATCAATCGAAGTATGATTCAGCCTGCTGATGTTCAATATGATGGAACAGTGCAAAGTTGCAGAGTTCATGACATGATACTTGAGCTTATTGTGTCAATATCAACCAAGATTAACTTTGTTGCCGTACTACATAAAGATCAAGATGAAACGAGATTTACAGATTACAAGACCAAGGTTCGCCGGTTAGCCCACCAGTCCAACTGTATTGAGAAATTATTGGAACGGATGAGCAGGGATGACTTGTCTCATATTCGCTCTATCATCTCCTTCGATTATGTCAAAGGAATACCTCATCTTGGTGATTTCCAAGCACTGCGGGTGTTGGATTTAGGATCTTGTAGATCAATTGAAAACCACCATATTGAGAATCTAGAGATGTTGTACCAACTCAAGTATTTGGATCTAAGCCGTACAAGCATCAGTGAGCTTCCAATGCAGATAGATAATCTCAGGTATTTGGAAACACTAGATCTTCGAGGGTGTGCCATAGAAAAATTGCCAGCCAGTACTGTTAGATTACAAAACATGCAACGCCTGCTTGTTAACAGAAGTGTAAAATTTCCTGATGAAATTGGACACATGCAGGCCTTACAGACGTTGTTGTTTGTCTCAATGTCCTGTAACTCCATCAAATTTGTGGAAGAGCTCAGCAAGCTGATCAAAATGAGGGTACTCAACATAACTTTCTCTAAACCTGTTGACATGGTTGATGAAGTAAGGAAGTACACAGATTCTTTGGTCTCATCACTCAACGAGTTGTTCAACCTTGAATCTCTAAAGATTGATCCTGAAGAAGGTTGTTCCCTGGACTCACTAATGGGAGTGTACCTAACTTTTGGCTGTCTCAAAAAACTTGTCATTGGCTACATTTCTAGGATCCCAAAATGGATCAACCCATCTATGTACAATCTAGTCCACCTGGAACTGAAAGTTGACATTGTGCGAGAGGAAGATCTCCATTCTCTTGAACTCTTGCCCTGCCTGCTATATCTTCAGCTGGAAATGACAGATGGCTCCAGCAAAATGCTCACTGTTGGCAGCGAGGGATTCCGATGCTTAAGAGAGTCGCAATTCATATGGAAGAATGATGGGATGGGACTAGTGTTTCTAGAAGGTGCCATGCCAGAGCTTCAAACATTGCATCTTTACTTCAGAACTCACGAAACAATAGCCAATTATTCTGGTGTTGATGGCAATGGCATCGAGAATCTTTCGCGCCTCAAAAAACTCTGCGTTGATGTTGATTGTAGTGGTTCAACTAGGGAGGAGGTTGAGGCTGCGGAGGATTCCATCAGGAAAGCAGCAGATAGGCATAGAACCAAACTCACTCTTGAAATCCGAAGATGGTGTGAAGCATGCATGATAGAGGAAGAAGCACATGATGGTAATGCGGAATTTCCAAGCAGATCCGTGAATAGGAGAGCAAATCCAGTCAGAGTTGCCTTCAGGGTGAGGGCAGATCGGAGAAACAGGAATAGGACTAGGAGAAATAGAATCACTGCACCATCCGCATCAACTTAGGGTGATAACTGAAGGAGATTATGATTCATGAGGTTCATTCTTATGAGTGTTCTGAGTCTGAATTCTGAAAAGACCATCAAATACAGAGGAAAAAAGATGCTGTAATCTTGTATCGATTGGTTCCGTTTATATATCGATTTGTCAGTGATGCATTTTTTGACCTGTACACTCAAGATCAAGAAGGAAGTCACGAAGCATTAGAATTCAGAACTCAGAAGTGAACCAAATGAAGATAAGCCTTCAGTGCATAGGTGTCCTTGCAAATGGATGCAGATTGAGCATTTTCATCAGACCGATTACAATCAGAAGGATATTATATGTTCGTGTTATAAGAAGGCACGGTCTGTGCCAGAAATACCAGTACATAGATATTCTTTTGGTGTGATTTGCTTTTCTATTGGAGAATGCACTTATTTGAATTTGTGATAATAAATATATGAC]
consensusID : consensus_2405#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3359 fasta sequence
[CCTCCGCCGACACAACGCTACCGCAGACCCATCCCCAATTCCCCATTTCCCATCCAGGAGAGAAAACCGAGCGATCTCGCTCTGACCTCCGAGAGGCACCATTGAGGAGATGGCGGAAGTGAGCGCGGCAATGGGGTCAAATCGTTCCGTCCGCAAGAAGCTTGCGGCGTTGCTGTCCGACGAGCGCAAGGATTTCATACGGGTGCGTAGCAAGGTAAAGCCTCTGATTGATGCTCTTGAATCTGTCCATGCCTGCTTTGAGAAATTGTCGCTCGAAGATGAGAAGAATCTTGATGCGTTACAAGAAGCCTGGATGATGGATTTACGGGAGCTGTCCTATGACATGGAGGATAGTCTTGACAGGTTTCTTGTCAAATCTGCTGCTGAACCGGGTAGCTGTAAGAAGCTCTTCAAGATCTTGTTAACGAAGATCAAGGGTAGCACCAATGGGATTGTTAAGGTGATCCAAGATATCAAGATGCCAGTCGAGGAGCTCAACGAAAGGATGAACAGATTCAAGCTCAGTGATGACCGTCATGTAACATACGACCCGATCAAGATCGACTCAAGGATGAACCTGAACCATCAAAGAAGCTGGTGGTGGTCTCTATTGTTGGTCTTGGAGGATTGGGCAAGACAACTCTAGCAAACCAAGTCTATCATCATCTCAAGCCGGAGTTCGACTGCTCTGCTTTCGTATCAGTGGGACAAAATCCTGATGTTCTAAAGATCTTGGATAATATCCTTAGTGGACTCACCCATCAACCTTATGCCACCACCGGGTCAACAGTGCAAGTACTCGTTGAGAAAACCAGAAGATTCATCGCGGACAAAAGGTACCTTGTTCTTCTTGATGACATCTGGAATGCAAGAGATTGGGATATATTGAGGTGTTCTCTGCCTAACAATCACTTAGGCAGCAGAATAATAACAACAACACGCATTGTCGATGTTGCTAGATCATGTTGCAGCCACAAAGAGGATCACATCTACAAAATGGGTCCTCTGAGTGATTTGGATTCGCAGAGACTATTTTTTAGAAGAATATTCGGCTCAGATGATGGTTGTCCGACTCAACTTAAAAGGATTTCCATGGACATATTGAAAAGGTGTCGAGGTTTGCCATTGGCTACACTTACTTTAGCTAGTATTCTAGCCGACGTACCCATGTTAGCAGAAAAATGGAAGCAAGTGCATAATTCTATTGGTTTGGCAACTCCAGGGGAGAATATGAATCGTATATTATCTTTGAGTTTCCATGACCTCCCTAATCATTTAAAGACATGTTTATTGTATTTAAGCATATTTCCAGAAGATTATGTAATTGAGAGAGAACAGTTAGTATGGAGATGGATAGCTGAAGGTTTCATTCCTGAAACACGTGGCATTCCTTTAGAGGGAGTCGGAAGTGCATACTTTAATGAGCTTATCAATCGAAGTATGATTCAGCCTGCTGATGTTCAATATGATGGAACAGTGCAAAGTTGCAGAGTTCATGACATGATACTTGAGCTTATTGTGTCAATATCAACCAAGATTAACTTTGTTGCCGTACTACATAAAGATCAAGATGAAACGAGATTTACAGATTACAAGACCAAGGTTCGCCGGTTAGCCCACCAGTCCAACTGTATTGAGAAATTATTGGAACGGATGAGCAGGGATGACTTGTCTCATATTCGCTCTATCATCTCCTTCGATTATGTCAAAGGAATACCTCATCTTGGTGATTTCCAAGCACTGCGGGTGTTGGATTTAGGATCTTGTAGATCAATTGAAAACCACCATATTGAGAATCTAGAGATGTTGTACCAACTCAAGTATTTGGATCTAAGCCGTACAAGCATCAGTGAGCTTCCAATGCAGATAGATAATCTCAGGTATTTGGAAACACTAGATCTTCGAGGGTGTGCCATAGAAAAATTGCCAGCCAGTACTGTTAGATTACAAAACATGCAACGCCTGCTTGTTAACAGAAGTGTAAAATTTCCTGATGAAATTGGACACATGCAGGCCTTACAGACGTTGTTGTTTGTCTCAATGTCCTGTAACTCCATCAAATTTGTGGAAGAGCTCAGCAAGCTGATCAAAATGAGGGTACTCAACATAACTTTCTCTAAACCTGTTGACATGGTTGATGAAGTAAGGAAGTACACAGATTCTTTGGTCTCATCACTCAACGAGTTGTTCAACCTTGAATCTCTAAAGATTGATCCTGAAGAAGGTTGTTCCCTGGACTCACTAATGGGAGTGTACCTAACTTTTGGCTGTCTCAAAAAACTTGTCATTGGCTACATTTCTAGGATCCCAAAATGGATCAACCCATCTATGTACAATCTAGTCCACCTGGAACTGAAAGTTGACATTGTGCGAGAGGAAGATCTCCATTCTCTTGAACTCTTGCCCTGCCTGCTATATCTTCAGCTGGAAATGACAGATGGCTCCAGCAAAATGCTCACTGTTGGCAGCGAGGGATTCCGATGCTTAAGAGAGTCGCAATTCATATGGAAGAATGATGGGATGGGACTAGTGTTTCTAGAAGGTGCCATGCCAGAGCTTCAAACATTGCATCTTTACTTCAGAACTCACGAAACAATAGCCAATTATTCTGGTGTTGATGGCAATGGCATCGAGAATCTTTCGCGCCTCAAAAAACTCTGCGTTGATGTTGATTGTAGTGGTTCAACTAGGGAGGAGGTTGAGGCTGCGGAGGATTCCATCAGGAAAGCAGCAGATAGGCATAGAACCAAACTCACTCTTGAAATCCGAAGATGGTGTGAAGCATGCATGATAGAGGAAGAAGCACATGATGGTAATGCGGAATTTCCAAGCAGATCCGTGAATAGGAGAGCAAATCCAGTCAGAGTTGCCTTCAGGGTGAGGGCAGATCGGAGAAACAGGAATAGGACTAGGAGAAATAGAATCACTGCACCATCCGCATCAACTTAGGGTTCATTCTTATGAGTGTTCTGAGTCTGAATTCTGAAAAGACCATCAAATACAGAGGAAAAAAGATGCTGTAATCTTGTATCGATTGGTTCCGTTTATATATCGATTTGTCAGTGATGCATTTTTTGACCTGTACACTCAAGATCAAGAAGGAAGTCACGAAGCATTAGAATTCAGAACTCAGAAGTGAACCAAATGAAGATAAGCCTTCAGTGCATAGGTGTCCTTGCAAATGGATGCAGATTGAGCATTTTCATCAGACCGATTACAATCAGAAGGATATTATATGTTCGTGTTATAAGAAGGCACGGTCTGTGCCAGAAATACCAGTACATAGATATTCTTTTGGTGTGATTTGCTTTTCTATTGGAGAATGCACTTATTTGAATTTGTGATAATAAATATATGAC]
[+] EMBL AK066779 [CCTCCGCCGACACAACGCTACCGCAGACCCATCCCCAATTCCCCATTTCCCATCCAGGAGAGAAAACCGAGCGATCTCGCTCTGACCTCCGAGAGGCACCATTGAGGAGATGGCGGAAGTGAGCGCGGCAATGGGGTCAAATCGTTCCGTCCGCAAGAAGCTTGCGGCGTTGCTGTCCGACGAGCGCAAGGATTTCATACGGGTGCGTAGCAAGGTAAAGCCTCTGATTGATGCTCTTGAATCTGTCCATGCCTGCTTTGAGAAATTGTCGCTCGAAGATGAGAAGAATCTTGATGCGTTACAAGAAGCCTGGATGATGGATTTACGGGAGCTGTCCTATGACATGGAGGATAGTCTTGACAGGTTTCTTGTCAAATCTGCTGCTGAACCGGGTAGCTGTAAGAAGCTCTTCAAGATCTTGTTAACGAAGATCAAGGGTAGCACCAATGGGATTGTTAAGGTGATCCAAGATATCAAGATGCCAGTCGAGGAGCTCAACGAAAGGATGAACAGATTCAAGCTCAGTGATGACCGTCATGTAACATACGACCCGATCAAGATCGACTCAAGGATGAACCTGAACCATCAAAGAAGCTGGTGGTGGTCTCTATTGTTGGTCTTGGAGGATTGGGCAAGACAACTCTAGCAAACCAAGTCTATCATCATCTCAAGCCGGAGTTCGACTGCTCTGCTTTCGTATCAGTGGGACAAAATCCTGATGTTCTAAAGATCTTGGATAATATCCTTAGTGGACTCACCCATCAACCTTATGCCACCACCGGGTCAACAGTGCAAGTACTCGTTGAGAAAACCAGAAGATTCATCGCGGACAAAAGGTACCTTGTTCTTCTTGATGACATCTGGAATGCAAGAGATTGGGATATATTGAGGTGTTCTCTGCCTAACAATCACTTAGGCAGCAGAATAATAACAACAACACGCATTGTCGATGTTGCTAGATCATGTTGCAGCCACAAAGAGGATCACATCTACAAAATGGGTCCTCTGAGTGATTTGGATTCGCAGAGACTATTTTTTAGAAGAATATTCGGCTCAGATGATGGTTGTCCGACTCAACTTAAAAGGATTTCCATGGACATATTGAAAAGGTGTCGAGGTTTGCCATTGGCTACACTTACTTTAGCTAGTATTCTAGCCGACGTACCCATGTTAGCAGAAAAATGGAAGCAAGTGCATAATTCTATTGGTTTGGCAACTCCAGGGGAGAATATGAATCGTATATTATCTTTGAGTTTCCATGACCTCCCTAATCATTTAAAGACATGTTTATTGTATTTAAGCATATTTCCAGAAGATTATGTAATTGAGAGAGAACAGTTAGTATGGAGATGGATAGCTGAAGGTTTCATTCCTGAAACACGTGGCATTCCTTTAGAGGGAGTCGGAAGTGCATACTTTAATGAGCTTATCAATCGAAGTATGATTCAGCCTGCTGATGTTCAATATGATGGAACAGTGCAAAGTTGCAGAGTTCATGACATGATACTTGAGCTTATTGTGTCAATATCAACCAAGATTAACTTTGTTGCCGTACTACATAAAGATCAAGATGAAACGAGATTTACAGATTACAAGACCAAGGTTCGCCGGTTAGCCCACCAGTCCAACTGTATTGAGAAATTATTGGAACGGATGAGCAGGGATGACTTGTCTCATATTCGCTCTATCATCTCCTTCGATTATGTCAAAGGAATACCTCATCTTGGTGATTTCCAAGCACTGCGGGTGTTGGATTTAGGATCTTGTAGATCAATTGAAAACCACCATATTGAGAATCTAGAGATGTTGTACCAACTCAAGTATTTGGATCTAAGCCGTACAAGCATCAGTGAGCTTCCAATGCAGATAGATAATCTCAGGTATTTGGAAACACTAGATCTTCGAGGGTGTGCCATAGAAAAATTGCCAGCCAGTACTGTTAGATTACAAAACATGCAACGCCTGCTTGTTAACAGAAGTGTAAAATTTCCTGATGAAATTGGACACATGCAGGCCTTACAGACGTTGTTGTTTGTCTCAATGTCCTGTAACTCCATCAAATTTGTGGAAGAGCTCAGCAAGCTGATCAAAATGAGGGTACTCAACATAACTTTCTCTAAACCTGTTGACATGGTTGATGAAGTAAGGAAGTACACAGATTCTTTGGTCTCATCACTCAACGAGTTGTTCAACCTTGAATCTCTAAAGATTGATCCTGAAGAAGGTTGTTCCCTGGACTCACTAATGGGAGTGTACCTAACTTTTGGCTGTCTCAAAAAACTTGTCATTGGCTACATTTCTAGGATCCCAAAATGGATCAACCCATCTATGTACAATCTAGTCCACCTGGAACTGAAAGTTGACATTGTGCGAGAGGAAGATCTCCATTCTCTTGAACTCTTGCCCTGCCTGCTATATCTTCAGCTGGAAATGACAGATGGCTCCAGCAAAATGCTCACTGTTGGCAGCGAGGGATTCCGATGCTTAAGAGAGTCGCAATTCATATGGAAGAATGATGGGATGGGACTAGTGTTTCTAGAAGGTGCCATGCCAGAGCTTCAAACATTGCATCTTTACTTCAGAACTCACGAAACAATAGCCAATTATTCTGGTGTTGATGGCAATGGCATCGAGAATCTTTCGCGCCTCAAAAAACTCTGCGTTGATGTTGATTGTAGTGGTTCAACTAGGGAGGAGGTTGAGGCTGCGGAGGATTCCATCAGGAAAGCAGCAGATAGGCATAGAACCAAACTCACTCTTGAAATCCGAAGATGGTGTGAAGCATGCATGATAGAGGAAGAAGCACATGATGGTAATGCGGAATTTCCAAGCAGATCCGTGAATAGGAGAGCAAATCCAGTCAGAGTTGCCTTCAGGGTGAGGGCAGATCGGAGAAACAGGAATAGGACTAGGAGAAATAGAATCACTGCACCATCCGCATCAACTTAGGGTTCATTCTTATGAGTGTTCTGAGTCTGAATTCTGAAAAGACCATCAAATACAGAGGAAAAAAGATGCTGTAATCTTGTATCGATTGGTTCCGTTTATATATCGATTTGTCAGTGATGCATTTTTTGACCTGTACACTCAAGATCAAGAAGGAAGTCACGAAGCATTAGAATTCAGAACTCAGAAGTGAACCAAATGAAGATAAGCCTTCAGTGCATAGGTGTCCTTGCAAATGGATGCAGATTGAGCATTTTCATCAGACCGATTACAATCAGAAGGATATTATATGTTCGTGTTATAAGAAGGCACGGTCTGTGCCAGAAATACCAGTACATAGATATTCTTTTGGTGTGATTTGCTTTTCTATTGGAGAATGCACTTATTTGAATTTGTGATAATAAATATATGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2405#0 TCCCCCTCGGGCACGCGGCGATGTTTCCCATTATTTCCAGCCTCCGCCGACACAACGCTA 60
consensus_2405#1 ----------------------------------------CCTCCGCCGACACAACGCTA 20
********************
consensus_2405#0 CCGCAGACCCATCCCCAATTCCCCATTTCCCATCCAGGAGAGAAAACCGAGCGATCTCGC 120
consensus_2405#1 CCGCAGACCCATCCCCAATTCCCCATTTCCCATCCAGGAGAGAAAACCGAGCGATCTCGC 80
************************************************************
consensus_2405#0 TCTGACCTCCGAGAGGCACCATTGAGGAGATGGCGGAAGTGAGCGCGGCAATGGGGTCAA 180
consensus_2405#1 TCTGACCTCCGAGAGGCACCATTGAGGAGATGGCGGAAGTGAGCGCGGCAATGGGGTCAA 140
************************************************************
consensus_2405#0 ATCGTTCCGTCCGCAAGAAGCTTGCGGCGTTGCTGTCCGACGAGCGCAAGGATTTCATAC 240
consensus_2405#1 ATCGTTCCGTCCGCAAGAAGCTTGCGGCGTTGCTGTCCGACGAGCGCAAGGATTTCATAC 200
************************************************************
consensus_2405#0 GGGTGCGTAGCAAGGTAAAGCCTCTGATTGATGCTCTTGAATCTGTCCATGCCTGCTTTG 300
consensus_2405#1 GGGTGCGTAGCAAGGTAAAGCCTCTGATTGATGCTCTTGAATCTGTCCATGCCTGCTTTG 260
************************************************************
consensus_2405#0 AGAAATTGTCGCTCGAAGATGAGAAGAATCTTGATGCGTTACAAGAAGCCTGGATGATGG 360
consensus_2405#1 AGAAATTGTCGCTCGAAGATGAGAAGAATCTTGATGCGTTACAAGAAGCCTGGATGATGG 320
************************************************************
consensus_2405#0 ATTTACGGGAGCTGTCCTATGACATGGAGGATAGTCTTGACAGGTTTCTTGTCAAATCTG 420
consensus_2405#1 ATTTACGGGAGCTGTCCTATGACATGGAGGATAGTCTTGACAGGTTTCTTGTCAAATCTG 380
************************************************************
consensus_2405#0 CTGCTGAACCGGGTAGCTGTAAGAAGCTCTTCAAGATCTTGTTAACGAAGATCAAGGGTA 480
consensus_2405#1 CTGCTGAACCGGGTAGCTGTAAGAAGCTCTTCAAGATCTTGTTAACGAAGATCAAGGGTA 440
************************************************************
consensus_2405#0 GCACCAATGGGATTGTTAAGGTGATCCAAGATATCAAGATGCCAGTCGAGGAGCTCAACG 540
consensus_2405#1 GCACCAATGGGATTGTTAAGGTGATCCAAGATATCAAGATGCCAGTCGAGGAGCTCAACG 500
************************************************************
consensus_2405#0 AAAGGATGAACAGATTCAAGCTCAGTGATGACCGTCATGTAACATACGACCCGATCAAGA 600
consensus_2405#1 AAAGGATGAACAGATTCAAGCTCAGTGATGACCGTCATGTAACATACGACCCGATCAAGA 560
************************************************************
consensus_2405#0 TCGACTCAAGGGTAACAGCTTTATATGTGGACGCTTCACATCTTGTAGGTCTGGATGGGC 660
consensus_2405#1 TCGACTCAAGG------------------------------------------------- 571
***********
consensus_2405#0 CAAAACTAGAACTAATTAAGATGTTGCGCATTGAAGATGAACCTGAACCATCAAAGAAGC 720
consensus_2405#1 ------------------------------------ATGAACCTGAACCATCAAAGAAGC 595
************************
consensus_2405#0 TGGTGGTGGTCTCTATTGTTGGTCTTGGAGGATTGGGCAAGACAACTCTAGCAAACCAAG 780
consensus_2405#1 TGGTGGTGGTCTCTATTGTTGGTCTTGGAGGATTGGGCAAGACAACTCTAGCAAACCAAG 655
************************************************************
consensus_2405#0 TCTATCATCATCTCAAGCCGGAGTTCGACTGCTCTGCTTTCGTATCAGTGGGACAAAATC 840
consensus_2405#1 TCTATCATCATCTCAAGCCGGAGTTCGACTGCTCTGCTTTCGTATCAGTGGGACAAAATC 715
************************************************************
consensus_2405#0 CTGATGTTCTAAAGATCTTGGATAATATCCTTAGTGGACTCACCCATCAACCTTATGCCA 900
consensus_2405#1 CTGATGTTCTAAAGATCTTGGATAATATCCTTAGTGGACTCACCCATCAACCTTATGCCA 775
************************************************************
consensus_2405#0 CCACCGGGTCAACAGTGCAAGTACTCGTTGAGAAAACCAGAAGATTCATCGCGGACAAAA 960
consensus_2405#1 CCACCGGGTCAACAGTGCAAGTACTCGTTGAGAAAACCAGAAGATTCATCGCGGACAAAA 835
************************************************************
consensus_2405#0 GGTACCTTGTTCTTCTTGATGACATCTGGAATGCAAGAGATTGGGATATATTGAGGTGTT 1020
consensus_2405#1 GGTACCTTGTTCTTCTTGATGACATCTGGAATGCAAGAGATTGGGATATATTGAGGTGTT 895
************************************************************
consensus_2405#0 CTCTGCCTAACAATCACTTAGGCAGCAGAATAATAACAACAACACGCATTGTCGATGTTG 1080
consensus_2405#1 CTCTGCCTAACAATCACTTAGGCAGCAGAATAATAACAACAACACGCATTGTCGATGTTG 955
************************************************************
consensus_2405#0 CTAGATCATGTTGCAGCCACAAAGAGGATCACATCTACAAAATGGGTCCTCTGAGTGATT 1140
consensus_2405#1 CTAGATCATGTTGCAGCCACAAAGAGGATCACATCTACAAAATGGGTCCTCTGAGTGATT 1015
************************************************************
consensus_2405#0 TGGATTCGCAGAGACTATTTTTTAGAAGAATATTCGGCTCAGATGATGGTTGTCCGACTC 1200
consensus_2405#1 TGGATTCGCAGAGACTATTTTTTAGAAGAATATTCGGCTCAGATGATGGTTGTCCGACTC 1075
************************************************************
consensus_2405#0 AACTTAAAAGGATTTCCATGGACATATTGAAAAGGTGTCGAGGTTTGCCATTGGCTACAC 1260
consensus_2405#1 AACTTAAAAGGATTTCCATGGACATATTGAAAAGGTGTCGAGGTTTGCCATTGGCTACAC 1135
************************************************************
consensus_2405#0 TTACTTTAGCTAGTATTCTAGCCGACGTACCCATGTTAGCAGAAAAATGGAAGCAAGTGC 1320
consensus_2405#1 TTACTTTAGCTAGTATTCTAGCCGACGTACCCATGTTAGCAGAAAAATGGAAGCAAGTGC 1195
************************************************************
consensus_2405#0 ATAATTCTATTGGTTTGGCAACTCCAGGGGAGAATATGAATCGTATATTATCTTTGAGTT 1380
consensus_2405#1 ATAATTCTATTGGTTTGGCAACTCCAGGGGAGAATATGAATCGTATATTATCTTTGAGTT 1255
************************************************************
consensus_2405#0 TCCATGACCTCCCTAATCATTTAAAGACATGTTTATTGTATTTAAGCATATTTCCAGAAG 1440
consensus_2405#1 TCCATGACCTCCCTAATCATTTAAAGACATGTTTATTGTATTTAAGCATATTTCCAGAAG 1315
************************************************************
consensus_2405#0 ATTATGTAATTGAGAGAGAACAGTTAGTATGGAGATGGATAGCTGAAGGTTTCATTCCTG 1500
consensus_2405#1 ATTATGTAATTGAGAGAGAACAGTTAGTATGGAGATGGATAGCTGAAGGTTTCATTCCTG 1375
************************************************************
consensus_2405#0 AAACACGTGGCATTCCTTTAGAGGGAGTCGGAAGTGCATACTTTAATGAGCTTATCAATC 1560
consensus_2405#1 AAACACGTGGCATTCCTTTAGAGGGAGTCGGAAGTGCATACTTTAATGAGCTTATCAATC 1435
************************************************************
consensus_2405#0 GAAGTATGATTCAGCCTGCTGATGTTCAATATGATGGAACAGTGCAAAGTTGCAGAGTTC 1620
consensus_2405#1 GAAGTATGATTCAGCCTGCTGATGTTCAATATGATGGAACAGTGCAAAGTTGCAGAGTTC 1495
************************************************************
consensus_2405#0 ATGACATGATACTTGAGCTTATTGTGTCAATATCAACCAAGATTAACTTTGTTGCCGTAC 1680
consensus_2405#1 ATGACATGATACTTGAGCTTATTGTGTCAATATCAACCAAGATTAACTTTGTTGCCGTAC 1555
************************************************************
consensus_2405#0 TACATAAAGATCAAGATGAAACGAGATTTACAGATTACAAGACCAAGGTTCGCCGGTTAG 1740
consensus_2405#1 TACATAAAGATCAAGATGAAACGAGATTTACAGATTACAAGACCAAGGTTCGCCGGTTAG 1615
************************************************************
consensus_2405#0 CCCACCAGTCCAACTGTATTGAGAAATTATTGGAACGGATGAGCAGGGATGACTTGTCTC 1800
consensus_2405#1 CCCACCAGTCCAACTGTATTGAGAAATTATTGGAACGGATGAGCAGGGATGACTTGTCTC 1675
************************************************************
consensus_2405#0 ATATTCGCTCTATCATCTCCTTCGATTATGTCAAAGGAATACCTCATCTTGGTGATTTCC 1860
consensus_2405#1 ATATTCGCTCTATCATCTCCTTCGATTATGTCAAAGGAATACCTCATCTTGGTGATTTCC 1735
************************************************************
consensus_2405#0 AAGCACTGCGGGTGTTGGATTTAGGATCTTGTAGATCAATTGAAAACCACCATATTGAGA 1920
consensus_2405#1 AAGCACTGCGGGTGTTGGATTTAGGATCTTGTAGATCAATTGAAAACCACCATATTGAGA 1795
************************************************************
consensus_2405#0 ATCTAGAGATGTTGTACCAACTCAAGTATTTGGATCTAAGCCGTACAAGCATCAGTGAGC 1980
consensus_2405#1 ATCTAGAGATGTTGTACCAACTCAAGTATTTGGATCTAAGCCGTACAAGCATCAGTGAGC 1855
************************************************************
consensus_2405#0 TTCCAATGCAGATAGATAATCTCAGGTATTTGGAAACACTAGATCTTCGAGGGTGTGCCA 2040
consensus_2405#1 TTCCAATGCAGATAGATAATCTCAGGTATTTGGAAACACTAGATCTTCGAGGGTGTGCCA 1915
************************************************************
consensus_2405#0 TAGAAAAATTGCCAGCCAGTACTGTTAGATTACAAAACATGCAACGCCTGCTTGTTAACA 2100
consensus_2405#1 TAGAAAAATTGCCAGCCAGTACTGTTAGATTACAAAACATGCAACGCCTGCTTGTTAACA 1975
************************************************************
consensus_2405#0 GAAGTGTAAAATTTCCTGATGAAATTGGACACATGCAGGCCTTACAGACGTTGTTGTTTG 2160
consensus_2405#1 GAAGTGTAAAATTTCCTGATGAAATTGGACACATGCAGGCCTTACAGACGTTGTTGTTTG 2035
************************************************************
consensus_2405#0 TCTCAATGTCCTGTAACTCCATCAAATTTGTGGAAGAGCTCAGCAAGCTGATCAAAATGA 2220
consensus_2405#1 TCTCAATGTCCTGTAACTCCATCAAATTTGTGGAAGAGCTCAGCAAGCTGATCAAAATGA 2095
************************************************************
consensus_2405#0 GGGTACTCAACATAACTTTCTCTAAACCTGTTGACATGGTTGATGAAGTAAGGAAGTACA 2280
consensus_2405#1 GGGTACTCAACATAACTTTCTCTAAACCTGTTGACATGGTTGATGAAGTAAGGAAGTACA 2155
************************************************************
consensus_2405#0 CAGATTCTTTGGTCTCATCACTCAACGAGTTGTTCAACCTTGAATCTCTAAAGATTGATC 2340
consensus_2405#1 CAGATTCTTTGGTCTCATCACTCAACGAGTTGTTCAACCTTGAATCTCTAAAGATTGATC 2215
************************************************************
consensus_2405#0 CTGAAGAAGGTTGTTCCCTGGACTCACTAATGGGAGTGTACCTAACTTTTGGCTGTCTCA 2400
consensus_2405#1 CTGAAGAAGGTTGTTCCCTGGACTCACTAATGGGAGTGTACCTAACTTTTGGCTGTCTCA 2275
************************************************************
consensus_2405#0 AAAAACTTGTCATTGGCTACATTTCTAGGATCCCAAAATGGATCAACCCATCTATGTACA 2460
consensus_2405#1 AAAAACTTGTCATTGGCTACATTTCTAGGATCCCAAAATGGATCAACCCATCTATGTACA 2335
************************************************************
consensus_2405#0 ATCTAGTCCACCTGGAACTGAAAGTTGACATTGTGCGAGAGGAAGATCTCCATTCTCTTG 2520
consensus_2405#1 ATCTAGTCCACCTGGAACTGAAAGTTGACATTGTGCGAGAGGAAGATCTCCATTCTCTTG 2395
************************************************************
consensus_2405#0 AACTCTTGCCCTGCCTGCTATATCTTCAGCTGGAAATGACAGATGGCTCCAGCAAAATGC 2580
consensus_2405#1 AACTCTTGCCCTGCCTGCTATATCTTCAGCTGGAAATGACAGATGGCTCCAGCAAAATGC 2455
************************************************************
consensus_2405#0 TCACTGTTGGCAGCGAGGGATTCCGATGCTTAAGAGAGTCGCAATTCATATGGAAGAATG 2640
consensus_2405#1 TCACTGTTGGCAGCGAGGGATTCCGATGCTTAAGAGAGTCGCAATTCATATGGAAGAATG 2515
************************************************************
consensus_2405#0 ATGGGATGGGACTAGTGTTTCTAGAAGGTGCCATGCCAGAGCTTCAAACATTGCATCTTT 2700
consensus_2405#1 ATGGGATGGGACTAGTGTTTCTAGAAGGTGCCATGCCAGAGCTTCAAACATTGCATCTTT 2575
************************************************************
consensus_2405#0 ACTTCAGAACTCACGAAACAATAGCCAATTATTCTGGTGTTGATGGCAATGGCATCGAGA 2760
consensus_2405#1 ACTTCAGAACTCACGAAACAATAGCCAATTATTCTGGTGTTGATGGCAATGGCATCGAGA 2635
************************************************************
consensus_2405#0 ATCTTTCGCGCCTCAAAAAACTCTGCGTTGATGTTGATTGTAGTGGTTCAACTAGGGAGG 2820
consensus_2405#1 ATCTTTCGCGCCTCAAAAAACTCTGCGTTGATGTTGATTGTAGTGGTTCAACTAGGGAGG 2695
************************************************************
consensus_2405#0 AGGTTGAGGCTGCGGAGGATTCCATCAGGAAAGCAGCAGATAGGCATAGAACCAAACTCA 2880
consensus_2405#1 AGGTTGAGGCTGCGGAGGATTCCATCAGGAAAGCAGCAGATAGGCATAGAACCAAACTCA 2755
************************************************************
consensus_2405#0 CTCTTGAAATCCGAAGATGGTGTGAAGCATGCATGATAGAGGAAGAAGCACATGATGGTA 2940
consensus_2405#1 CTCTTGAAATCCGAAGATGGTGTGAAGCATGCATGATAGAGGAAGAAGCACATGATGGTA 2815
************************************************************
consensus_2405#0 ATGCGGAATTTCCAAGCAGATCCGTGAATAGGAGAGCAAATCCAGTCAGAGTTGCCTTCA 3000
consensus_2405#1 ATGCGGAATTTCCAAGCAGATCCGTGAATAGGAGAGCAAATCCAGTCAGAGTTGCCTTCA 2875
************************************************************
consensus_2405#0 GGGTGAGGGCAGATCGGAGAAACAGGAATAGGACTAGGAGAAATAGAATCACTGCACCAT 3060
consensus_2405#1 GGGTGAGGGCAGATCGGAGAAACAGGAATAGGACTAGGAGAAATAGAATCACTGCACCAT 2935
************************************************************
consensus_2405#0 CCGCATCAACTTAGGGTGATAACTGAAGGAGATTATGATTCATGAGGTTCATTCTTATGA 3120
consensus_2405#1 CCGCATCAACTTAGGGT-------------------------------TCATTCTTATGA 2964
***************** ************
consensus_2405#0 GTGTTCTGAGTCTGAATTCTGAAAAGACCATCAAATACAGAGGAAAAAAGATGCTGTAAT 3180
consensus_2405#1 GTGTTCTGAGTCTGAATTCTGAAAAGACCATCAAATACAGAGGAAAAAAGATGCTGTAAT 3024
************************************************************
consensus_2405#0 CTTGTATCGATTGGTTCCGTTTATATATCGATTTGTCAGTGATGCATTTTTTGACCTGTA 3240
consensus_2405#1 CTTGTATCGATTGGTTCCGTTTATATATCGATTTGTCAGTGATGCATTTTTTGACCTGTA 3084
************************************************************
consensus_2405#0 CACTCAAGATCAAGAAGGAAGTCACGAAGCATTAGAATTCAGAACTCAGAAGTGAACCAA 3300
consensus_2405#1 CACTCAAGATCAAGAAGGAAGTCACGAAGCATTAGAATTCAGAACTCAGAAGTGAACCAA 3144
************************************************************
consensus_2405#0 ATGAAGATAAGCCTTCAGTGCATAGGTGTCCTTGCAAATGGATGCAGATTGAGCATTTTC 3360
consensus_2405#1 ATGAAGATAAGCCTTCAGTGCATAGGTGTCCTTGCAAATGGATGCAGATTGAGCATTTTC 3204
************************************************************
consensus_2405#0 ATCAGACCGATTACAATCAGAAGGATATTATATGTTCGTGTTATAAGAAGGCACGGTCTG 3420
consensus_2405#1 ATCAGACCGATTACAATCAGAAGGATATTATATGTTCGTGTTATAAGAAGGCACGGTCTG 3264
************************************************************
consensus_2405#0 TGCCAGAAATACCAGTACATAGATATTCTTTTGGTGTGATTTGCTTTTCTATTGGAGAAT 3480
consensus_2405#1 TGCCAGAAATACCAGTACATAGATATTCTTTTGGTGTGATTTGCTTTTCTATTGGAGAAT 3324
************************************************************
consensus_2405#0 GCACTTATTTGAATTTGTGATAATAAATATATGAC 3515
consensus_2405#1 GCACTTATTTGAATTTGTGATAATAAATATATGAC 3359
***********************************
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||