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Oryza sativa
cluster # 2410 cluster # 2410       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2410#0 length = 2383 sequences # 2  

consensusID : consensus_2410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2383
fasta sequence
                              [TGAACTTTTTGCTGAAGAGTACCTGGGAGTAGGAAGATCACTTGAGACAGATATACAATCAAGCGAAGGTGTCTAGTTTTGGGGCTCATATCAAGTGTTAACTGTGTTACAATACGTATGTTAATTGTACAGCAGCGTGCTTCCATATGAGGAAATCCACTTCTGCAGTGCTCAAGCATTGTGAAGGTCTGGAATACAGATAAACAAGGGGGTTCAGAAATAGGTGGTGGATAACAATCTGCAGCAGAAAGTTCAGGGATGTTTGACACCTTTGTCTGAAAGCCAATATGAATTATCACAGCCACAGGCCACAATCCTCACCAGGTTCATCTTTTGAGCACCCCACTGGCCATGGTCTTTTATCGTCCCGTTCTCAATAAATTGAACCCTCTCCAATCTCCATGGCCTCGACACTGTTCTTCGTTTGCACAAGTTCGAGGCCTTCTCCACTGGGATGCCCCCTTAATGCCACCAGACAGGGTATGAGGGTAAACTGAAGTTCAACCCTTACAATTCTGCACCAGCTGATCATCTGATGAAATTTTGCAAAATCTGCAATTATCAGGATTGACGAGAGAATCAAAGACCTAGCGTTTGACCAGTTAGTTACCTGAGCGAGTTGATTTGCACTGTTCCTTGAACACACAAGTGCCAATGGCAGTATGTTGCATCTTCATCCCCTGCAAACCTACAAGGGAGAAAAAAAATAGTTGGCATGTATTAATCGGAATCCGAGTCTCACATGTATTAATCGGAATCCGAGTCTCCGACTCGGATTTGTACTAGCTCTCCTCCTATAATTCACGCGCCACCGCTTGCTTGCATTGCATGCGTTCTTTGACACAAGGACAACGTCGCAGATTCGCAGCCAAGGACGTCGTCCGTGATGGCGCTCCGACCACCGCGGCCGTGTCCGGCCGGCGTGCAGCAGCGGCAGCACGACGTCGACGGCGCCGGCAACGCCAAGACTTCCCCGGAACAGAAGCTCGAGTTGCTGGACCTGCAGGAGGAGGACGACGAGCTCATCTTCCTCGACGCCGACGACGAGGAGGGACGCCAGCTGCGCGAGAAGCTGGAGTCGCTGGAGCGGGAGTTCTGCCTGCTGGATGAGCAGCGGGACAACGCGCTGTTCCAGATTCACGTGCTGGAAGAGACGGTGCGCTTCCGCGAGGAGCTCGTCAGGCGGCTGACGGCGGTCACCCCCCTCGTCGTCGCCCAGCTCGACGAGGTCGTCGACGAGCACCACGCCGTCGTGACGCTGGGCGACGGATGCGAGAGGAAGATGTGCGTCGGCGTCGCCGGCTCGCTCGACCGCGGCCTCCTCAAGCCCTCGGCGAACGTCGCGCTGAACGGCCGGTCGCTCGCGCTCGTCGGCGTGCCCCCCTCCGACGTCGCCGCCTGCTCGGCCGCGCGGTTCCTCGTCGCGGACGCCGACAAGCCGGGCGTCGCCTACGACGACATCGGCGGGTGCGAGGCGCAGAAGCGGGAGGTGCGCGAGGCCGTGGAGCTGCCGCTGACGCACCCGGAGCTCTTCGCCGCCGCCGGCGTCGACCCGCCGCGCGGCGTGCTCCTGCACGGCCCGCTGGGCACCGGGAAGACCATGCTCGCCAAGGCCGTCGCGCGGGAGACCTCGGCGGCGTTCTTCCGCGTGAACGCCGCCGAGCTCGCGCGGCACGACGGGCCGAGGGTGGTGCGCGACCTGTTCCGGCTCGCCAGGGACATGGCGCCGGCCATCGTCTTCATCGACGAGGTGGACGCGATCGCGGCGGCGCGGCAAGGCGGCGACGACGACGACGGCGGTGCCAGGCGCCACGTGCAGCGCGTGCTGATTGAGCTGCTCACCCAGATGGACGGCTTCGACGAGTCCACCAACGTGCGGGTGATCATGGCGACGAACCGCGCCGACGACCTGGACCCGGCGCTGCTCCGGCCGGGGCGGCTGGACCGCAAGGTCGAGTTCACGGCGCCCGAGAGCCCGGAGGAGAAGCGGCTGGTGCTGCAGACGTGCACGGCGGGGATGAGCCTGGACGGCGACGTCGACCTCGACGCCCTGGCGGCGCGGCGCGACAAGCTCAGCGCCGCCGAGATCGCCGCCGTGTGCCGCAAGGCCGGCATGCAGGCCGTGCGCGACAGGCGGGGCGCCGTGACGGCGGACACTTCGACAAGGGATACCTCGCCGTCGTCGGCAAGAAGCCCGGCGACGCCGCCACCGAGTTCCACTTCTACAACTGATCGCCGGCTTCGCTTAGCAACACAGCTCATATCTTTACGCCTTTCACTAGGAAAAGGCATTGTATAGCTCCTGCTTGGGCAACGTCTCAAATGTATACAATTATTCTGTAATTCACTGAACAAATTTAAGATAGAAACACCAGCAATTTTA]

[-] EMBL CB663164             [TGAACTTTTTGCTGAAGAGTACCTGGGAGTAGGAAGATCACTTGAGACAGATATACAATCAAGCGAAGGTGTCTAGTTTTGGGGCTCATATCAAGTGTTAACTGTGTTACAATACGTATGTTAATTGTACAGCAGCGTGCTTCCATATGAGGAAATCCACTTCTGCAGTGCTCAAGCATTGTGAAGGTCTGGAATACAGATAAACAAGGGGGTTCAGAAATAGGTGGTGGATAACAATCTGCAGCAGAAAGTTCAGGGATGTTTGACACCTTTGTCTGAAAGCCAATATGAATTATCACAGCCACAGGCCACAATCCTCACCAGGTTCATCTTTTGAGCACCCCACTGGCCATGGTCTTTTATCGTCCCGTTCTCAATAAATTGAACCCTCTCCAATCTCCATGGCCTCGACACTGTTCTTCGTTTGCACAAGTTCGAGGCCTTCTCCACTGGGATGCCCCCTTAATGCCACCAGACAGGGTATGAGGGTAAACTGAAGTTCAACCCTTACAATTCTGCACCAGCTGATCATCTGATGAAATTTTGCAAAATCTGCAATTATCAGGATTGACGAGAGAATCAAAGACCTAGCGTTTGACCAGTTAGTTACCTGAGCGAGTTGATTTGCACTGTTCCTTGAACACACAAGTGCCAATGGCAGTATGTTGCATCTTCATCCCCTGCAAACCTACAAGGGAGAAAAAAAATAGTTGGCATGTATTAATCGGAATCCGAGTCTCACATGTATTAATCGGAATCCGAGTCTCCGACTCGGATTTGTACTAGCTCTCCTCCTATAATTCACGCGCCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK106791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTCATCCCCTGCAAACCTACAAGGGAGAAAAAAAATAGTTGGCATGTATTAATCGGAATCCGAGTCTCACATGTATTAATCGGAATCCGAGTCTCCGACTCGGATTTGTACTAGCTCTCCTCCTATAATTCACGCGCCACCGCTTGCTTGCATTGCATGCGTTCTTTGACACAAGGACAACGTCGCAGATTCGCAGCCAAGGACGTCGTCCGTGATGGCGCTCCGACCACCGCGGCCGTGTCCGGCCGGCGTGCAGCAGCGGCAGCACGACGTCGACGGCGCCGGCAACGCCAAGACTTCCCCGGAACAGAAGCTCGAGTTGCTGGACCTGCAGGAGGAGGACGACGAGCTCATCTTCCTCGACGCCGACGACGAGGAGGGACGCCAGCTGCGCGAGAAGCTGGAGTCGCTGGAGCGGGAGTTCTGCCTGCTGGATGAGCAGCGGGACAACGCGCTGTTCCAGATTCACGTGCTGGAAGAGACGGTGCGCTTCCGCGAGGAGCTCGTCAGGCGGCTGACGGCGGTCACCCCCCTCGTCGTCGCCCAGCTCGACGAGGTCGTCGACGAGCACCACGCCGTCGTGACGCTGGGCGACGGATGCGAGAGGAAGATGTGCGTCGGCGTCGCCGGCTCGCTCGACCGCGGCCTCCTCAAGCCCTCGGCGAACGTCGCGCTGAACGGCCGGTCGCTCGCGCTCGTCGGCGTGCCCCCCTCCGACGTCGCCGCCTGCTCGGCCGCGCGGTTCCTCGTCGCGGACGCCGACAAGCCGGGCGTCGCCTACGACGACATCGGCGGGTGCGAGGCGCAGAAGCGGGAGGTGCGCGAGGCCGTGGAGCTGCCGCTGACGCACCCGGAGCTCTTCGCCGCCGCCGGCGTCGACCCGCCGCGCGGCGTGCTCCTGCACGGCCCGCTGGGCACCGGGAAGACCATGCTCGCCAAGGCCGTCGCGCGGGAGACCTCGGCGGCGTTCTTCCGCGTGAACGCCGCCGAGCTCGCGCGGCACGACGGGCCGAGGGTGGTGCGCGACCTGTTCCGGCTCGCCAGGGACATGGCGCCGGCCATCGTCTTCATCGACGAGGTGGACGCGATCGCGGCGGCGCGGCAAGGCGGCGACGACGACGACGGCGGTGCCAGGCGCCACGTGCAGCGCGTGCTGATTGAGCTGCTCACCCAGATGGACGGCTTCGACGAGTCCACCAACGTGCGGGTGATCATGGCGACGAACCGCGCCGACGACCTGGACCCGGCGCTGCTCCGGCCGGGGCGGCTGGACCGCAAGGTCGAGTTCACGGCGCCCGAGAGCCCGGAGGAGAAGCGGCTGGTGCTGCAGACGTGCACGGCGGGGATGAGCCTGGACGGCGACGTCGACCTCGACGCCCTGGCGGCGCGGCGCGACAAGCTCAGCGCCGCCGAGATCGCCGCCGTGTGCCGCAAGGCCGGCATGCAGGCCGTGCGCGACAGGCGGGGCGCCGTGACGGCGGACACTTCGACAAGGGATACCTCGCCGTCGTCGGCAAGAAGCCCGGCGACGCCGCCACCGAGTTCCACTTCTACAACTGATCGCCGGCTTCGCTTAGCAACACAGCTCATATCTTTACGCCTTTCACTAGGAAAAGGCATTGTATAGCTCCTGCTTGGGCAACGTCTCAAATGTATACAATTATTCTGTAATTCACTGAACAAATTTAAGATAGAAACACCAGCAATTTTA]


>consensus_2410#0 TGAACTTTTTGCTGAAGAGTACCTGGGAGTAGGAAGATCACTTGAGACAGATATACAATC AAGCGAAGGTGTCTAGTTTTGGGGCTCATATCAAGTGTTAACTGTGTTACAATACGTATG TTAATTGTACAGCAGCGTGCTTCCATATGAGGAAATCCACTTCTGCAGTGCTCAAGCATT GTGAAGGTCTGGAATACAGATAAACAAGGGGGTTCAGAAATAGGTGGTGGATAACAATCT GCAGCAGAAAGTTCAGGGATGTTTGACACCTTTGTCTGAAAGCCAATATGAATTATCACA GCCACAGGCCACAATCCTCACCAGGTTCATCTTTTGAGCACCCCACTGGCCATGGTCTTT TATCGTCCCGTTCTCAATAAATTGAACCCTCTCCAATCTCCATGGCCTCGACACTGTTCT TCGTTTGCACAAGTTCGAGGCCTTCTCCACTGGGATGCCCCCTTAATGCCACCAGACAGG GTATGAGGGTAAACTGAAGTTCAACCCTTACAATTCTGCACCAGCTGATCATCTGATGAA ATTTTGCAAAATCTGCAATTATCAGGATTGACGAGAGAATCAAAGACCTAGCGTTTGACC AGTTAGTTACCTGAGCGAGTTGATTTGCACTGTTCCTTGAACACACAAGTGCCAATGGCA GTATGTTGCATCTTCATCCCCTGCAAACCTACAAGGGAGAAAAAAAATAGTTGGCATGTA TTAATCGGAATCCGAGTCTCACATGTATTAATCGGAATCCGAGTCTCCGACTCGGATTTG TACTAGCTCTCCTCCTATAATTCACGCGCCACCGCTTGCTTGCATTGCATGCGTTCTTTG ACACAAGGACAACGTCGCAGATTCGCAGCCAAGGACGTCGTCCGTGATGGCGCTCCGACC ACCGCGGCCGTGTCCGGCCGGCGTGCAGCAGCGGCAGCACGACGTCGACGGCGCCGGCAA CGCCAAGACTTCCCCGGAACAGAAGCTCGAGTTGCTGGACCTGCAGGAGGAGGACGACGA GCTCATCTTCCTCGACGCCGACGACGAGGAGGGACGCCAGCTGCGCGAGAAGCTGGAGTC GCTGGAGCGGGAGTTCTGCCTGCTGGATGAGCAGCGGGACAACGCGCTGTTCCAGATTCA CGTGCTGGAAGAGACGGTGCGCTTCCGCGAGGAGCTCGTCAGGCGGCTGACGGCGGTCAC CCCCCTCGTCGTCGCCCAGCTCGACGAGGTCGTCGACGAGCACCACGCCGTCGTGACGCT GGGCGACGGATGCGAGAGGAAGATGTGCGTCGGCGTCGCCGGCTCGCTCGACCGCGGCCT CCTCAAGCCCTCGGCGAACGTCGCGCTGAACGGCCGGTCGCTCGCGCTCGTCGGCGTGCC CCCCTCCGACGTCGCCGCCTGCTCGGCCGCGCGGTTCCTCGTCGCGGACGCCGACAAGCC GGGCGTCGCCTACGACGACATCGGCGGGTGCGAGGCGCAGAAGCGGGAGGTGCGCGAGGC CGTGGAGCTGCCGCTGACGCACCCGGAGCTCTTCGCCGCCGCCGGCGTCGACCCGCCGCG CGGCGTGCTCCTGCACGGCCCGCTGGGCACCGGGAAGACCATGCTCGCCAAGGCCGTCGC GCGGGAGACCTCGGCGGCGTTCTTCCGCGTGAACGCCGCCGAGCTCGCGCGGCACGACGG GCCGAGGGTGGTGCGCGACCTGTTCCGGCTCGCCAGGGACATGGCGCCGGCCATCGTCTT CATCGACGAGGTGGACGCGATCGCGGCGGCGCGGCAAGGCGGCGACGACGACGACGGCGG TGCCAGGCGCCACGTGCAGCGCGTGCTGATTGAGCTGCTCACCCAGATGGACGGCTTCGA CGAGTCCACCAACGTGCGGGTGATCATGGCGACGAACCGCGCCGACGACCTGGACCCGGC GCTGCTCCGGCCGGGGCGGCTGGACCGCAAGGTCGAGTTCACGGCGCCCGAGAGCCCGGA GGAGAAGCGGCTGGTGCTGCAGACGTGCACGGCGGGGATGAGCCTGGACGGCGACGTCGA CCTCGACGCCCTGGCGGCGCGGCGCGACAAGCTCAGCGCCGCCGAGATCGCCGCCGTGTG CCGCAAGGCCGGCATGCAGGCCGTGCGCGACAGGCGGGGCGCCGTGACGGCGGACACTTC GACAAGGGATACCTCGCCGTCGTCGGCAAGAAGCCCGGCGACGCCGCCACCGAGTTCCAC TTCTACAACTGATCGCCGGCTTCGCTTAGCAACACAGCTCATATCTTTACGCCTTTCACT AGGAAAAGGCATTGTATAGCTCCTGCTTGGGCAACGTCTCAAATGTATACAATTATTCTG TAATTCACTGAACAAATTTAAGATAGAAACACCAGCAATTTTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)