cluster # 2443

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Oryza sativa
cluster # 2443 cluster # 2443 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2443#0 length = 1016 sequences # 2

consensusID : consensus_2443#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1016
fasta sequence

                              [CTACAACAAAACTTTCAAACAAGGAACAACAATGCGTCGATAACTCACAGCATTGGCGAAATCGCGGCAAGTGAAATGCTGGTCGGCGATGATGCGATCACCAAGCGCCTTGAGGCTCTTCACCGACAGCGGCTTCAGCTCGTGAATCTAAACAGAATCACCTTGCTGGCGATCCACACGGCAACGAGGGCGAAGAGCTCCAGGTTGCTGTCCCTCAGAGGCTCGAGCAGCCAGGAGGTCACAGCTCGGCCACCCCGTGCGCCACAGAACCCCATCTTCCTGCAGCGACAGCGAGCAAGTTAGTAAAACAATAAGAAACCAATTTAACCCCCACAAAAACCAAGGTCTCAACTTCGCGGGGTCACCTCCGGAGGGAGGGCAGTAGGCGGTCGGCGAAGAAGGAGAGCGCGGTGTACTTGACGACGGGACGGAGGTCGAGCCGCTAGAAAGGAATCGCAGCAGAAGGCGGCATGCGAGGTGAGGTAGCTGTCGAGGGGACCATGCCGGAAGCTGAGGGGGTGGAGGGGAGCCCGTACCGTGGAGGCGTGGAGGAGGAACTCGATGAGGGCGGCGGCGGCGGGAGGGGCCAGGCCACGCGCTTGCCGCCGCCTCCACCGCGCGGTCCTCGTCCATGGTGGTGCGCGCCGCGGTGCGGCAGCGAGGAGTTGGGACGCCGGCTAGATTGCCGAAGAGGTGGGGAGAATGGAGGAGCGGCTGCTCAACCAGGCCTCCAGAATTCTTCAACGGCCCACTAACCTCATGCTTTCGGCCTGTTCGGCTCTTGGTGTTGGACCCTGTGAATAGTGTGCTGTTCTATATGAGGAAAACGGAAGGGGATCCTCTCACGTGAAGTCAGATGCCTACATGTCAGTGACATATCACGAAGAAGTTCAAGTCATGTATCCCTTTCCAAGGAAAACGGGTTTGGCTATATGTTTCTTTCGAAGTTGCATTTTCCCGATTTTGCATTTCAATTAGAAACATATGACCTATTTGAGAATTTTTTGGTGACTGCA]

[+] EMBL CB665267             [CTACAACAAAACTTTCAAACAAGGAACAACAATGCGTCGATAACTCACAGCATTGGCGAAATCGCGGCAAGTGAAATGCTGGTCGGCGATGATGCGATCACCAAGCGCCTTGAGGCTCTTCACCGACAGCGGCTTCAGCTCGTGAATCTAAACAGAATCACCTTGCTGGCGATCCACACGGCAACGAGGGCGAAGAGCTCCAGGTTGCTGTCCCTCAGAGGCTCGAGCAGCCAGGAGGTCACAGCTCGGCCACCCCGTGCGCCACAGAACCCCATCTTCCTGCAGCGACAGCGAGCAAGTTAGTAAAACAATAAGAAACCAATTTAACCCCCACAAAAACCAAGGTCTCAACTTCGCGGGGTCACCTCCGGAGGGAGGGCAGTAGGCGGTCGGCGAAGAAGGAGAGCGCGGTGTACTTGACGACGGGACGGAGGTCGAGCCGCTAGAAAGGAATCGCAGCAGAAGGCGGCATGCGAGGTGAGGTAGCTGTCGAGGGGACCATGCCGGAAGCTGAGGGGGTGGAGGGGAGCCCGTACCGTGGAGGCGTGGAGGAGGAACTCGATGAGGGCGGCGGCGGCGGGAGGGGCCAGGCCACGCGCTTGCCGCCGCCTCCACCGCGCGGTCCTCGTCCATGGTGGTGCGCGCCGCGGTGCGGCAGCGAGGAGTTGGGACGCCGGCTAGATTGCCGAAGAGGTGGGGAGAATGGAGGAGCGGCTGCTCAACCAGGCCTCCAGAATTCTTCAACGGCCCACTAACCTCATGCTTTCGGCCTGTTCGGCTCTTGGTGTTGGACCCTGTGAATAGTGTGCTG                                                                                                                                                                                                             ]
[-] EMBL CB665268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCATGGTGGTGCGCGCCGCGGTGCGGCAGCGAGGAGTTGGGACGCCGGCTAGATTGCCGAAGAGGTGGGGAGAATGGAGGAGCGGCTGCTCAACCAGGCCTCCAGAATTCTTCAACGGCCCACTAACCTCATGCTTTCGGCCTGTTCGGCTCTTGGTGTTGGACCCTGTGAATAGTGTGCTGTTCTATATGAGGAAAACGGAAGGGGATCCTCTCACGTGAAGTCAGATGCCTACATGTCAGTGACATATCACGAAGAAGTTCAAGTCATGTATCCCTTTCCAAGGAAAACGGGTTTGGCTATATGTTTCTTTCGAAGTTGCATTTTCCCGATTTTGCATTTCAATTAGAAACATATGACCTATTTGAGAATTTTTTGGTGACTGCA]




>consensus_2443#0
CTACAACAAAACTTTCAAACAAGGAACAACAATGCGTCGATAACTCACAGCATTGGCGAA
ATCGCGGCAAGTGAAATGCTGGTCGGCGATGATGCGATCACCAAGCGCCTTGAGGCTCTT
CACCGACAGCGGCTTCAGCTCGTGAATCTAAACAGAATCACCTTGCTGGCGATCCACACG
GCAACGAGGGCGAAGAGCTCCAGGTTGCTGTCCCTCAGAGGCTCGAGCAGCCAGGAGGTC
ACAGCTCGGCCACCCCGTGCGCCACAGAACCCCATCTTCCTGCAGCGACAGCGAGCAAGT
TAGTAAAACAATAAGAAACCAATTTAACCCCCACAAAAACCAAGGTCTCAACTTCGCGGG
GTCACCTCCGGAGGGAGGGCAGTAGGCGGTCGGCGAAGAAGGAGAGCGCGGTGTACTTGA
CGACGGGACGGAGGTCGAGCCGCTAGAAAGGAATCGCAGCAGAAGGCGGCATGCGAGGTG
AGGTAGCTGTCGAGGGGACCATGCCGGAAGCTGAGGGGGTGGAGGGGAGCCCGTACCGTG
GAGGCGTGGAGGAGGAACTCGATGAGGGCGGCGGCGGCGGGAGGGGCCAGGCCACGCGCT
TGCCGCCGCCTCCACCGCGCGGTCCTCGTCCATGGTGGTGCGCGCCGCGGTGCGGCAGCG
AGGAGTTGGGACGCCGGCTAGATTGCCGAAGAGGTGGGGAGAATGGAGGAGCGGCTGCTC
AACCAGGCCTCCAGAATTCTTCAACGGCCCACTAACCTCATGCTTTCGGCCTGTTCGGCT
CTTGGTGTTGGACCCTGTGAATAGTGTGCTGTTCTATATGAGGAAAACGGAAGGGGATCC
TCTCACGTGAAGTCAGATGCCTACATGTCAGTGACATATCACGAAGAAGTTCAAGTCATG
TATCCCTTTCCAAGGAAAACGGGTTTGGCTATATGTTTCTTTCGAAGTTGCATTTTCCCG
ATTTTGCATTTCAATTAGAAACATATGACCTATTTGAGAATTTTTTGGTGACTGCA

clustalw multiple alignements is not computed in this case