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Oryza sativa
cluster # 247 cluster # 247       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_247#0 length = 1912 sequences # 2  

consensusID : consensus_247#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1912
fasta sequence
                              [TCTGGTCGGCTCCGGCCGCCGCGGGCGCGTTGGCTTCCGCTTCGGTTTAGCGGATGCGGGCTTCCGCTAGGGTTTCTCCCGCTCTGTTGTTAAATGAAGAAAGCACTTGGAATACACCCAGTAGTTGCACTTTACCTGCTGGAGAGATGCATTGACTGGTCAAATTCTGAATGATTGCTCTGAGTTGTCTAACTTGAGCAACAGAACAGGAATGGCTAAGTGGGGGTGTCAAGACTCAAGAAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATGCCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCATGAGGCCAAGTAACATGGTTTGCGTGGTTCTTTCTGACAGTGTAGGCCTCCAAGTCGCCTTCTCACCAGCACTTTATCTCCTGTTGTTCTGAGCTTCTCCCACTTGCAAGGGGCAATACACGAGTAGCAGAACATACACTACACATCACTCCTCAGTATGGCCTGTCCCTCTCTTCCATCTCTAAGAGTTCCTCTTCCCAATTCATGTTTCTGGCATGTGACTGCCATTGGGGCCATATTGTAGTGTGGCCCCTGTTGGTCAGAGCCTTGAGCTAGGTGACACACTTGTTGTAAACGGGAAGGTCACTCTCCCTCTTGCCTGATCTCATCAGGTTCCTCTATTTGCAGCTAGTAGTAGTCTATTTAACACGCCAGTAGCCACCCATTTCTTTCTCCCGTGCGGCTGTCTTGTGTTTCTCAAACTTTGTCTTACGCCAGCCAACCGTAAACAGACACTGTCTGCGCGTCTCTCTTGCAAGAACAGCTAGCTCTCCCATACATCTCTCCTACGTTGGCTGAGATCGATTGCTGCCACCTACATTGGCCGATATGTCAAGCCGGAGGTCACGGTCGAGGCAGTCAGGCTCGTCGAGGATCACCGACGAGCAAATCAGCGATCTTGTATCCAAGTTGCAGGATCTCCTCCCCGAGGCTCGACTCCGGAGCAATGATAGAGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAGCCGCCGGCGGCCGTCGTCGCCACATTGTCTTTTGCTGCTGGGCAATCAGCGCGCACACACCCTCGGAATGTTTGTAGCTTAGAGAGTGATCTTAATTAGTACTGGAGGAGCAGGGATTCCTAATTCACTCTACGTTCATAAGTAATGTAATGTTGTTGTCATGTCATCTTCTAAACCAGATCAATCTTTTTTGTGTACTTAATCAAAATCCATCCTGATTCGTGCAAAATAAAAAAAATACCACTCCCTTCCTTTCGCTTTCCTTCTGCTCTCTCCCTCCTATCCTCCGCGCGTTCCTGTGCGTACTTTAGTGGGTTGATGCTTTTTACAGCGATGCCTAACGTCTCGAGGGGGGTGCGCCGCCCCGACAATTTCCCCTTATTAGACTCGTTTATGGTCCGGAAAATTGATGCAGTAGTAATACGTATGATCCTATTAAACCCGCCGGAAACCCACACTCGTCTCCGCAACCACAGTCCGGGACGCACGGTAGAGTATCTGGAGGAGGGCCTCGCACTAGATTCCCATCTCGCTAATCAAAAGTTAAAGTCCTGGTAGCGGACAAAGCGATTCAGGCGCTCAGCAAAAGTAGGCGAGAACTGGTGCTCTTGAGGGCCGACCGAGAGCGACAGGTAGTCGCATGTCTGCCGACGGCCCGTTTGGTACATCTCGCGTAGCTTGCGGTGATTAGGTCCCTGCAGTGGCTCCCGCCTCCACGCCCCCG]

[+] EMBL AK069569             [TCTGGTCGGCTCCGGCCGCCGCGGGCGCGTTGGCTTCCGCTTCGGTTTAGCGGATGCGGGCTTCCGCTAGGGTTTCTCCCGCTCTGTTGTTAAATGAAGAAAGCACTTGGAATACACCCAGTAGTTGCACTTTACCTGCTGGAGAGATGCATTGACTGGTCAAATTCTGAATGATTGCTCTGAGTTGTCTAACTTGAGCAACAGAACAGGAATGGCTAAGTGGGGGTGTCAAGACTCAAGAAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATGCCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCATGAGGCCAAGTAACATGGTTTGCGTGGTTCTTTCTGACAGTGTAGGCCTCCAAGTCGCCTTCTCACCAGCACTTTATCTCCTGTTGTTCTGAGCTTCTCCCACTTGCAAGGGGCAATACACGAGTAGCAGAACATACACTACACATCACTCCTCAGTATGGCCTGTCCCTCTCTTCCATCTCTAAGAGTTCCTCTTCCCAATTCATGTTTCTGGCATGTGACTGCCATTGGGGCCATATTGTAGTGTGGCCCCTGTTGGTCAGAGCCTTGAGCTAGGTGACACACTTGTTGTAAACGGGAAGGTCACTCTCCCTCTTGCCTGATCTCATCAGGTTCCTCTATTTGCAGCTAGTAGTAGTCTATTTAACACGCCAGTAGCCACCCATTTCTTTCTCCCGTGCGGCTGTCTTGTGTTTCTCAAACTTTGTCTTACGCCAGCCAACCGTAAACAGACACTGTCTGCGCGTCTCTCTTGCAAGAACAGCTAGCTCTCCCATACATCTCTCCTACGTTGGCTGAGATCGATTGCTGCCACCTACATTGGCCGATATGTCAAGCCGGAGGTCACGGTCGAGGCAGTCAGGCTCGTCGAGGATCACCGACGAGCAAATCAGCGATCTTGTATCCAAGTTGCAGGATCTCCTCCCCGAGGCTCGACTCCGGAGCAATGATAGAGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAGCCGCCGGCGGCCGTCGTCGCCACATTGTCTTTTGCTGCTGGGCAATCAGCGCGCACACACCCTCGGAATGTTTGTAGCTTAGAGAGTGATCTTAATTAGTACTGGAGGAGCAGGGATTCCTAATTCACTCTACGTTCATAAGTAATGTAATGTTGTTGTCATGTCATCTTCTAAACCAGATCAATCTTTTTTGTGTACTTAATCAAAATCCATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BE039877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCAAATCAGCGATCTTGTATCCAAGTTGCAGGATCTCCTCCCCGAGGCTCGACTCCGGAGCAATGATAGAGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAGCCGCCGGCGGCCGTCGTCGCCACATTGTCTTTTGCTGCTGGGCAATCAGCGCGCACACACCCTCGGAATGTTTGTAGCTTAGAGAGTGATCTTAATTAGTACTGGAGGAGCAGGGATTCCTAATTCACTCTACGTTCATAAGTAATGTAATGTTGTTGTCATGTCATCTTCTAAACCAGATCAATCTTTTTTGTGTACTTAATCAAAATCCATCCTGATTCGTGCAAAATAAAAAAAATACCACTCCCTTCCTTTCGCTTTCCTTCTGCTCTCTCCCTCCTATCCTCCGCGCGTTCCTGTGCGTACTTTAGTGGGTTGATGCTTTTTACAGCGATGCCTAACGTCTCGAGGGGGGTGCGCCGCCCCGACAATTTCCCCTTATTAGACTCGTTTATGGTCCGGAAAATTGATGCAGTAGTAATACGTATGATCCTATTAAACCCGCCGGAAACCCACACTCGTCTCCGCAACCACAGTCCGGGACGCACGGTAGAGTATCTGGAGGAGGGCCTCGCACTAGATTCCCATCTCGCTAATCAAAAGTTAAAGTCCTGGTAGCGGACAAAGCGATTCAGGCGCTCAGCAAAAGTAGGCGAGAACTGGTGCTCTTGAGGGCCGACCGAGAGCGACAGGTAGTCGCATGTCTGCCGACGGCCCGTTTGGTACATCTCGCGTAGCTTGCGGTGATTAGGTCCCTGCAGTGGCTCCCGCCTCCACGCCCCCG]


>consensus_247#0 TCTGGTCGGCTCCGGCCGCCGCGGGCGCGTTGGCTTCCGCTTCGGTTTAGCGGATGCGGG CTTCCGCTAGGGTTTCTCCCGCTCTGTTGTTAAATGAAGAAAGCACTTGGAATACACCCA GTAGTTGCACTTTACCTGCTGGAGAGATGCATTGACTGGTCAAATTCTGAATGATTGCTC TGAGTTGTCTAACTTGAGCAACAGAACAGGAATGGCTAAGTGGGGGTGTCAAGACTCAAG AAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATG CCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCA TGAGGCCAAGTAACATGGTTTGCGTGGTTCTTTCTGACAGTGTAGGCCTCCAAGTCGCCT TCTCACCAGCACTTTATCTCCTGTTGTTCTGAGCTTCTCCCACTTGCAAGGGGCAATACA CGAGTAGCAGAACATACACTACACATCACTCCTCAGTATGGCCTGTCCCTCTCTTCCATC TCTAAGAGTTCCTCTTCCCAATTCATGTTTCTGGCATGTGACTGCCATTGGGGCCATATT GTAGTGTGGCCCCTGTTGGTCAGAGCCTTGAGCTAGGTGACACACTTGTTGTAAACGGGA AGGTCACTCTCCCTCTTGCCTGATCTCATCAGGTTCCTCTATTTGCAGCTAGTAGTAGTC TATTTAACACGCCAGTAGCCACCCATTTCTTTCTCCCGTGCGGCTGTCTTGTGTTTCTCA AACTTTGTCTTACGCCAGCCAACCGTAAACAGACACTGTCTGCGCGTCTCTCTTGCAAGA ACAGCTAGCTCTCCCATACATCTCTCCTACGTTGGCTGAGATCGATTGCTGCCACCTACA TTGGCCGATATGTCAAGCCGGAGGTCACGGTCGAGGCAGTCAGGCTCGTCGAGGATCACC GACGAGCAAATCAGCGATCTTGTATCCAAGTTGCAGGATCTCCTCCCCGAGGCTCGACTC CGGAGCAATGATAGAGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGG AGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCC GACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAGCCGCCGGCGGCC GTCGTCGCCACATTGTCTTTTGCTGCTGGGCAATCAGCGCGCACACACCCTCGGAATGTT TGTAGCTTAGAGAGTGATCTTAATTAGTACTGGAGGAGCAGGGATTCCTAATTCACTCTA CGTTCATAAGTAATGTAATGTTGTTGTCATGTCATCTTCTAAACCAGATCAATCTTTTTT GTGTACTTAATCAAAATCCATCCTGATTCGTGCAAAATAAAAAAAATACCACTCCCTTCC TTTCGCTTTCCTTCTGCTCTCTCCCTCCTATCCTCCGCGCGTTCCTGTGCGTACTTTAGT GGGTTGATGCTTTTTACAGCGATGCCTAACGTCTCGAGGGGGGTGCGCCGCCCCGACAAT TTCCCCTTATTAGACTCGTTTATGGTCCGGAAAATTGATGCAGTAGTAATACGTATGATC CTATTAAACCCGCCGGAAACCCACACTCGTCTCCGCAACCACAGTCCGGGACGCACGGTA GAGTATCTGGAGGAGGGCCTCGCACTAGATTCCCATCTCGCTAATCAAAAGTTAAAGTCC TGGTAGCGGACAAAGCGATTCAGGCGCTCAGCAAAAGTAGGCGAGAACTGGTGCTCTTGA GGGCCGACCGAGAGCGACAGGTAGTCGCATGTCTGCCGACGGCCCGTTTGGTACATCTCG CGTAGCTTGCGGTGATTAGGTCCCTGCAGTGGCTCCCGCCTCCACGCCCCCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)