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Oryza sativa
cluster # 2477 cluster # 2477       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2477#0 length = 2958 sequences # 1  
consensus_2477#1 length = 1766 sequences # 1  

consensusID : consensus_2477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2958
fasta sequence
                              [TCTCTCTCTCTCTCTCTCTCTCGTCGACGCGCCGATGCGCCGAGATGGCCCCGATCATGAGTGGGGCGGCGGCGGCGGCGGGGGGCACGGGCGGCGCGGTCCCGCTCATCAAGAACGCCACCTCCGCGTCCCAGATGTCGCGTGGCAAGGCCGGCACCGGCGCCGGCGCGGTCGTCTGCTACTCCCCGATGATGGTCACCGCCTACGGCATCTGGCAGGGCGCCTCCCCTCTTGACTTCTCCCTCCCCCTCTTCCTCCTCCAGGTCGCCATCATCGTCGCCACCACCCGCCTCCTCGTCATCCTCCTCAAGCCCTTCCGCCAGCCTCGCGTCATCGCGGAGATCCTCGCTGGCGTGATACTGGGGCCGTCGGTGATGGGGCAGGTTTCGACGTGGGCGGTGAAAGTGTTCCCGGAGCGGAGCTTGCTGACGCTGGAGACGGTGGCGCACCTGGGGCTCCTCTACTTCCTCTTCCTGGTCGGCCTCGAGATGGACGTGAACACCATCAGGAGGTCGGGGAAGAAGGCGCTCATCATCGCCGTCGCCGGCATGGCGCTGCCGTTCTGCATCGGCACGGCGACGTCGTTCATCTTCCGGCACCAGGTGTCCAAGAACGTGCACCAGGCCTCCTTCCTGCTCTTCCTCGGCGTCGCGCTCTCCGTCACCGCGTTCCCGGTGCTGGCGCGCATCCTCGCCGAGGTCAAGCTGCTCAACTCCGACCTCGGCCGGATCGCCATGTCCGCCGCCATCGTCAACGACATGTGCGCCTGGATCCTCCTCGCGCTCGCCATCGCCATCTCAGAGGTCAACAGTTCGGCCTTCTCCTCCCTCTGGGTGCTCATCGCCGGGGTGGCCTTCGTGCTCGCCTGCTTCTACGTCGTCCGCCCGCTCATGTGGTGGATCGTCCGCCGCGTCCCCGAGGGGGAGGCCATCGGCGACGTGCACATCACGCTCATCCTCACCGGCGTCATGGTCGCCGGCGTCTGCACCGACGCCATCGGCATCCACTCCGTGTTCGGCGCGTTCGTGTACGGCCTCGTCATGCCGAGCGGCCCGCTCGGCGTCGTGCTAATCGAGAAGCTCGAGGACTTCGTCACCGGCCTCCTCCTGCCGCTCTTCTTCGCCATCAGTGGCCTCCGCACGAACGTGACCAAGGTCCGGGACCCCATCACCGTGGGCCTCCTCGTGCTCGTGTTCGTCATGGCCAGCTTCGCCAAGATCATGGGCACCATCCTCATCGCCGTCTCCTACACCATGACGTTCCGCGACGGCGTCGCCCTGGGGTTCCTCATGAACACCAGGGGCCTCGTCGAGATGATCGTCCTCAACATCGGGAGGGACAAGGAGGTGCTCGACGACGAGTCGTTCGCCGTGATGGTGCTGGTGTCGGTGGCCATGACGGCGCTGGTCACGCCGGTGGTGACGACGGTGTACCGGCCGGCGCGGCGGCTGGTCGGGTACAAGCGGCGGAACCTGCAGCGGTCGAAGCACGACGCGGAGCTCCGGATGCTGGCGTGCGTGCACACCACCCGCAACGTGCCGTCGATCATCTCGCTGCTCGAGCTCTCCAACCCGACGAAGCGCTCGCCGATCTTCATCTACGCGCTCCACCTCGTCGAGCTCACCGGCCGCGCCTCCAACATGCTCGCCGCGCACCACTCGGCGTCGAACCCGGGCGGCGCCAGCGACCACATCTTCAACGCGTTCGAGAGCTACGAGGAGATGGTCGGCGGCGTGTCGGTGCAGGCGCTCACGGCGGTGTCGCCGTACCAGACGATGCACGAGGACGTGTGCGTGCTGGCGGAGGACAAGCACGTCTCGCTCATCGTGCTCCCGTTCCACAAGCAGCAGACGGTGGACGGCGGCATGGAGCCCATCAACGCGTCGCTCCGGGGCTTCAACGAGAGCATCCTCGCGTCGGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCAGCGCCGCCGCGGCGAGGATGGCGGCCGTGCACCACGTCGCGCTCCTCTTCTTCGGCGGGCCCGACGACCGGGAGGGGCTCGCGTACGCGTGGCGGATGGTCGAAAACCCGGGCGTGTGCCTCACCATCGTCCGCTTAATCCCGCCGGGGTACACGGCGCCGGCGACCTCGCCGCCGCAGCCGCCGATGCCCGCCGCCCACTCCCGCGCCATCAACGTCGTCCCCGAGGTCGCCAAGAGCGAGCGGCAGATGGACGAGGAGTACCTCAACGAGTTCCGGTCGCGCAACCTCGGCAACGACGCCATCCTCTACGTCGAGCAGGTGGTGGCCAACAGCGAGGAGACGGTCGCCGCCATCCGCAGCCAGCTGGACAACGCGCACGAGCTGTACATCGTCGGCCGCCACCCCGGCGAGGCGAGCTCGCCGCTGACGTCGGCGCTCGCCGAGTGGATGGAGTCGCCGGAGCTCGGCCCCATCGGCGACCTCCTCGTCTCCTCCGAGTTCTCCAAGATGGCGTCCGTGCTGGTCATGCAGCAGTACGTCATCACGGCGCCGCTGCCGCCGCCGGTGGCGCTCGCCGGGCCGCCGACGGATGACCCCGTCCGGCAGTATTTGACCAACGCCAACCAGCGGCCGTCGGTGGCGATCGGCGGCAACCAGATGGGCGCCGCCGGCCGAGGCGGATGGAGCGGCGGCGCCGGCGGGTACTGACCGGACTCCGATCCGATCGAGCGCTTCGCTGTAATCGCCGTCAGTTAATCGCTCGATTGGTAGTAGTAGGGTTTCGAAGCTTAATTATTTTTAGGAATTAATTATGATTGTTAATTAATTTTTGTTGTGTAGTACGGAGTACAATTCTAGGTGATTGTTTTTGTAGATGTCGTGTTTAATTGGTCAGATTCTGTGATCGATCCCTCCTGTAGTGTGAGAGGTGATCGATTACATGTACTACTACGTGTTTTAACTCTTCTAGGTTCTTAACTAATTGTTCTTAGAGATG]

[+] EMBL AK106318             [TCTCTCTCTCTCTCTCTCTCTCGTCGACGCGCCGATGCGCCGAGATGGCCCCGATCATGAGTGGGGCGGCGGCGGCGGCGGGGGGCACGGGCGGCGCGGTCCCGCTCATCAAGAACGCCACCTCCGCGTCCCAGATGTCGCGTGGCAAGGCCGGCACCGGCGCCGGCGCGGTCGTCTGCTACTCCCCGATGATGGTCACCGCCTACGGCATCTGGCAGGGCGCCTCCCCTCTTGACTTCTCCCTCCCCCTCTTCCTCCTCCAGGTCGCCATCATCGTCGCCACCACCCGCCTCCTCGTCATCCTCCTCAAGCCCTTCCGCCAGCCTCGCGTCATCGCGGAGATCCTCGCTGGCGTGATACTGGGGCCGTCGGTGATGGGGCAGGTTTCGACGTGGGCGGTGAAAGTGTTCCCGGAGCGGAGCTTGCTGACGCTGGAGACGGTGGCGCACCTGGGGCTCCTCTACTTCCTCTTCCTGGTCGGCCTCGAGATGGACGTGAACACCATCAGGAGGTCGGGGAAGAAGGCGCTCATCATCGCCGTCGCCGGCATGGCGCTGCCGTTCTGCATCGGCACGGCGACGTCGTTCATCTTCCGGCACCAGGTGTCCAAGAACGTGCACCAGGCCTCCTTCCTGCTCTTCCTCGGCGTCGCGCTCTCCGTCACCGCGTTCCCGGTGCTGGCGCGCATCCTCGCCGAGGTCAAGCTGCTCAACTCCGACCTCGGCCGGATCGCCATGTCCGCCGCCATCGTCAACGACATGTGCGCCTGGATCCTCCTCGCGCTCGCCATCGCCATCTCAGAGGTCAACAGTTCGGCCTTCTCCTCCCTCTGGGTGCTCATCGCCGGGGTGGCCTTCGTGCTCGCCTGCTTCTACGTCGTCCGCCCGCTCATGTGGTGGATCGTCCGCCGCGTCCCCGAGGGGGAGGCCATCGGCGACGTGCACATCACGCTCATCCTCACCGGCGTCATGGTCGCCGGCGTCTGCACCGACGCCATCGGCATCCACTCCGTGTTCGGCGCGTTCGTGTACGGCCTCGTCATGCCGAGCGGCCCGCTCGGCGTCGTGCTAATCGAGAAGCTCGAGGACTTCGTCACCGGCCTCCTCCTGCCGCTCTTCTTCGCCATCAGTGGCCTCCGCACGAACGTGACCAAGGTCCGGGACCCCATCACCGTGGGCCTCCTCGTGCTCGTGTTCGTCATGGCCAGCTTCGCCAAGATCATGGGCACCATCCTCATCGCCGTCTCCTACACCATGACGTTCCGCGACGGCGTCGCCCTGGGGTTCCTCATGAACACCAGGGGCCTCGTCGAGATGATCGTCCTCAACATCGGGAGGGACAAGGAGGTGCTCGACGACGAGTCGTTCGCCGTGATGGTGCTGGTGTCGGTGGCCATGACGGCGCTGGTCACGCCGGTGGTGACGACGGTGTACCGGCCGGCGCGGCGGCTGGTCGGGTACAAGCGGCGGAACCTGCAGCGGTCGAAGCACGACGCGGAGCTCCGGATGCTGGCGTGCGTGCACACCACCCGCAACGTGCCGTCGATCATCTCGCTGCTCGAGCTCTCCAACCCGACGAAGCGCTCGCCGATCTTCATCTACGCGCTCCACCTCGTCGAGCTCACCGGCCGCGCCTCCAACATGCTCGCCGCGCACCACTCGGCGTCGAACCCGGGCGGCGCCAGCGACCACATCTTCAACGCGTTCGAGAGCTACGAGGAGATGGTCGGCGGCGTGTCGGTGCAGGCGCTCACGGCGGTGTCGCCGTACCAGACGATGCACGAGGACGTGTGCGTGCTGGCGGAGGACAAGCACGTCTCGCTCATCGTGCTCCCGTTCCACAAGCAGCAGACGGTGGACGGCGGCATGGAGCCCATCAACGCGTCGCTCCGGGGCTTCAACGAGAGCATCCTCGCGTCGGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCAGCGCCGCCGCGGCGAGGATGGCGGCCGTGCACCACGTCGCGCTCCTCTTCTTCGGCGGGCCCGACGACCGGGAGGGGCTCGCGTACGCGTGGCGGATGGTCGAAAACCCGGGCGTGTGCCTCACCATCGTCCGCTTAATCCCGCCGGGGTACACGGCGCCGGCGACCTCGCCGCCGCAGCCGCCGATGCCCGCCGCCCACTCCCGCGCCATCAACGTCGTCCCCGAGGTCGCCAAGAGCGAGCGGCAGATGGACGAGGAGTACCTCAACGAGTTCCGGTCGCGCAACCTCGGCAACGACGCCATCCTCTACGTCGAGCAGGTGGTGGCCAACAGCGAGGAGACGGTCGCCGCCATCCGCAGCCAGCTGGACAACGCGCACGAGCTGTACATCGTCGGCCGCCACCCCGGCGAGGCGAGCTCGCCGCTGACGTCGGCGCTCGCCGAGTGGATGGAGTCGCCGGAGCTCGGCCCCATCGGCGACCTCCTCGTCTCCTCCGAGTTCTCCAAGATGGCGTCCGTGCTGGTCATGCAGCAGTACGTCATCACGGCGCCGCTGCCGCCGCCGGTGGCGCTCGCCGGGCCGCCGACGGATGACCCCGTCCGGCAGTATTTGACCAACGCCAACCAGCGGCCGTCGGTGGCGATCGGCGGCAACCAGATGGGCGCCGCCGGCCGAGGCGGATGGAGCGGCGGCGCCGGCGGGTACTGACCGGACTCCGATCCGATCGAGCGCTTCGCTGTAATCGCCGTCAGTTAATCGCTCGATTGGTAGTAGTAGGGTTTCGAAGCTTAATTATTTTTAGGAATTAATTATGATTGTTAATTAATTTTTGTTGTGTAGTACGGAGTACAATTCTAGGTGATTGTTTTTGTAGATGTCGTGTTTAATTGGTCAGATTCTGTGATCGATCCCTCCTGTAGTGTGAGAGGTGATCGATTACATGTACTACTACGTGTTTTAACTCTTCTAGGTTCTTAACTAATTGTTCTTAGAGATG]


>consensus_2477#0 TCTCTCTCTCTCTCTCTCTCTCGTCGACGCGCCGATGCGCCGAGATGGCCCCGATCATGA GTGGGGCGGCGGCGGCGGCGGGGGGCACGGGCGGCGCGGTCCCGCTCATCAAGAACGCCA CCTCCGCGTCCCAGATGTCGCGTGGCAAGGCCGGCACCGGCGCCGGCGCGGTCGTCTGCT ACTCCCCGATGATGGTCACCGCCTACGGCATCTGGCAGGGCGCCTCCCCTCTTGACTTCT CCCTCCCCCTCTTCCTCCTCCAGGTCGCCATCATCGTCGCCACCACCCGCCTCCTCGTCA TCCTCCTCAAGCCCTTCCGCCAGCCTCGCGTCATCGCGGAGATCCTCGCTGGCGTGATAC TGGGGCCGTCGGTGATGGGGCAGGTTTCGACGTGGGCGGTGAAAGTGTTCCCGGAGCGGA GCTTGCTGACGCTGGAGACGGTGGCGCACCTGGGGCTCCTCTACTTCCTCTTCCTGGTCG GCCTCGAGATGGACGTGAACACCATCAGGAGGTCGGGGAAGAAGGCGCTCATCATCGCCG TCGCCGGCATGGCGCTGCCGTTCTGCATCGGCACGGCGACGTCGTTCATCTTCCGGCACC AGGTGTCCAAGAACGTGCACCAGGCCTCCTTCCTGCTCTTCCTCGGCGTCGCGCTCTCCG TCACCGCGTTCCCGGTGCTGGCGCGCATCCTCGCCGAGGTCAAGCTGCTCAACTCCGACC TCGGCCGGATCGCCATGTCCGCCGCCATCGTCAACGACATGTGCGCCTGGATCCTCCTCG CGCTCGCCATCGCCATCTCAGAGGTCAACAGTTCGGCCTTCTCCTCCCTCTGGGTGCTCA TCGCCGGGGTGGCCTTCGTGCTCGCCTGCTTCTACGTCGTCCGCCCGCTCATGTGGTGGA TCGTCCGCCGCGTCCCCGAGGGGGAGGCCATCGGCGACGTGCACATCACGCTCATCCTCA CCGGCGTCATGGTCGCCGGCGTCTGCACCGACGCCATCGGCATCCACTCCGTGTTCGGCG CGTTCGTGTACGGCCTCGTCATGCCGAGCGGCCCGCTCGGCGTCGTGCTAATCGAGAAGC TCGAGGACTTCGTCACCGGCCTCCTCCTGCCGCTCTTCTTCGCCATCAGTGGCCTCCGCA CGAACGTGACCAAGGTCCGGGACCCCATCACCGTGGGCCTCCTCGTGCTCGTGTTCGTCA TGGCCAGCTTCGCCAAGATCATGGGCACCATCCTCATCGCCGTCTCCTACACCATGACGT TCCGCGACGGCGTCGCCCTGGGGTTCCTCATGAACACCAGGGGCCTCGTCGAGATGATCG TCCTCAACATCGGGAGGGACAAGGAGGTGCTCGACGACGAGTCGTTCGCCGTGATGGTGC TGGTGTCGGTGGCCATGACGGCGCTGGTCACGCCGGTGGTGACGACGGTGTACCGGCCGG CGCGGCGGCTGGTCGGGTACAAGCGGCGGAACCTGCAGCGGTCGAAGCACGACGCGGAGC TCCGGATGCTGGCGTGCGTGCACACCACCCGCAACGTGCCGTCGATCATCTCGCTGCTCG AGCTCTCCAACCCGACGAAGCGCTCGCCGATCTTCATCTACGCGCTCCACCTCGTCGAGC TCACCGGCCGCGCCTCCAACATGCTCGCCGCGCACCACTCGGCGTCGAACCCGGGCGGCG CCAGCGACCACATCTTCAACGCGTTCGAGAGCTACGAGGAGATGGTCGGCGGCGTGTCGG TGCAGGCGCTCACGGCGGTGTCGCCGTACCAGACGATGCACGAGGACGTGTGCGTGCTGG CGGAGGACAAGCACGTCTCGCTCATCGTGCTCCCGTTCCACAAGCAGCAGACGGTGGACG GCGGCATGGAGCCCATCAACGCGTCGCTCCGGGGCTTCAACGAGAGCATCCTCGCGTCGG CGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCAGCGCCGCCGCGGCGAGGATGG CGGCCGTGCACCACGTCGCGCTCCTCTTCTTCGGCGGGCCCGACGACCGGGAGGGGCTCG CGTACGCGTGGCGGATGGTCGAAAACCCGGGCGTGTGCCTCACCATCGTCCGCTTAATCC CGCCGGGGTACACGGCGCCGGCGACCTCGCCGCCGCAGCCGCCGATGCCCGCCGCCCACT CCCGCGCCATCAACGTCGTCCCCGAGGTCGCCAAGAGCGAGCGGCAGATGGACGAGGAGT ACCTCAACGAGTTCCGGTCGCGCAACCTCGGCAACGACGCCATCCTCTACGTCGAGCAGG TGGTGGCCAACAGCGAGGAGACGGTCGCCGCCATCCGCAGCCAGCTGGACAACGCGCACG AGCTGTACATCGTCGGCCGCCACCCCGGCGAGGCGAGCTCGCCGCTGACGTCGGCGCTCG CCGAGTGGATGGAGTCGCCGGAGCTCGGCCCCATCGGCGACCTCCTCGTCTCCTCCGAGT TCTCCAAGATGGCGTCCGTGCTGGTCATGCAGCAGTACGTCATCACGGCGCCGCTGCCGC CGCCGGTGGCGCTCGCCGGGCCGCCGACGGATGACCCCGTCCGGCAGTATTTGACCAACG CCAACCAGCGGCCGTCGGTGGCGATCGGCGGCAACCAGATGGGCGCCGCCGGCCGAGGCG GATGGAGCGGCGGCGCCGGCGGGTACTGACCGGACTCCGATCCGATCGAGCGCTTCGCTG TAATCGCCGTCAGTTAATCGCTCGATTGGTAGTAGTAGGGTTTCGAAGCTTAATTATTTT TAGGAATTAATTATGATTGTTAATTAATTTTTGTTGTGTAGTACGGAGTACAATTCTAGG TGATTGTTTTTGTAGATGTCGTGTTTAATTGGTCAGATTCTGTGATCGATCCCTCCTGTA GTGTGAGAGGTGATCGATTACATGTACTACTACGTGTTTTAACTCTTCTAGGTTCTTAAC TAATTGTTCTTAGAGATG



consensusID : consensus_2477#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1766
fasta sequence
                              [ACCATCGTGCTCGCCGCCGGCTTCATCACCGACACCATCGGCATCCACGCGCTGTTCGGCGCCTTCATCGTCGGCATCATCGTGCCCAAGGAAGGGCCCTTCGCTGGCGTCCTCCTGGAGAAGGTGGAGGACCTCATCTCTGGCCTCTTCCTGCCGCTCTACTTCGTGTCGAGTGGCCTCAAGACCAACGTCCTGACCATCAAGGGCGGGGACTCGTGGGGGCTCCTCGTGCTCGTCGTCGCGACGGCGTGCATCGGCAAGATCGGCGGCACAGTGCTCGCGTCGCTCATCGTGCGTGTGCCGCTCCGTGAGGCGGTGACGCTCGGGGTGCTGATGAACACCAAGGGGCTCGTGGAGCTCATCGTGCTCAACATCGGCAAGGACCGGCACGTCCTCAACGACGAGACCTTCGCCATCCTCGTGCTCATGGCGCTCATAAACACCTTCATCACCACGCCGCTGGTGATGGCCATCTACAAGCCGGCGCGGCGCGCCCCCCCGTACAAGAACCGCGCCGTCCAGCGCCCGAACCCCGACGACGAGCTCCGCATGATGGTGTGCTTCCACAGCACGCGAAACATCCCCACCATGATCAACCTCATGGAGTCGTCGCGTGGGACGCGGCGGCGCGGCATCACCGTGTACGCCATGCACCTCGTCGAGCTCTCGGAGCGGTCGTCCGCCATCAACATGGTCCACAAGGCGCGGCGCAACGGGATGCCGTTCTGGAACCGGCGGCGCAACGGGGACGGCGACCAGCTCGTCGTCGCGTTCGAGACGTACCAGCAGCTGAGCCACGTGTCCATTCGCGCCATGACGGCCATCTCCGACCTCCACACCATCCACGAGGACGTGGTCACCAGCGCGCACCAGAAGCGCGCCGCGCTCATCGTGCTCCCCTTCCACAAGCTCCACCAGATGGACGGCCACATGGAGTCCCTCGGCGACGAGTACCAGCACATCAACCAGCGGGTGCTCCACCACGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCGGCGGCGCCGCGCAGGTCGCCGCCAGCGACGTGTCCTACAACATCGTCGTCCTCTTCTTCGGCGGCCGGGACGACCGCGAGGCCCTCTCCTACGCCACGCGCATGGTCGAGCACCCGGGCATCGCACTCCACGTGATACGCTTCGTCCCAGAGTCCGGCGGCGGCGGCGCGAACGACAAAGCCGCGGCGGACGATGCGTTCCTCGCAGAGTTCCGCGGCAAAGTCGCCGGCGGGAACGACTCCATCCGGTACGAGGAGAGGACGTCCAGAGGGAAGGCGGACGTGGTGGAGGCGATCAAGGCGATGGGTCCGACCAACCTGTTCCTCGTTGGACAGGGGTCGCCGTGCGCGCCGCTGATGGAACCGAGCGCTGAGTGCCCGGAGCTCGGGCCGGTGGGGAGCTACCTGGCGATGCCGGACTTCTCGACGGTGGCGTCGGTGCTGGTGATGAAGCAGTACGACCCGACGGCGGAGCACTACGAACTCGTCGAGGAGGTCGCGGACACCGCCGTGGACATCGACACACCGGGGCCTCGTAGAGGGTGATGCCCTTAGTCGTAAGTCGTAATTAACAGGCATATACTTCTACTAATACAAATTGTGTAATATGATAGTGCAATTTAATTGTAGACGTATTTTCATCCCTCAGGAGGATGGACCTTGATCCTCCAATGTGTTTTTACATCTGTTGTACACTTGTAAAATACAATAGTTCTGGAATTTTATGAAAGCACTTGACACAA]

[+] EMBL AK069092             [ACCATCGTGCTCGCCGCCGGCTTCATCACCGACACCATCGGCATCCACGCGCTGTTCGGCGCCTTCATCGTCGGCATCATCGTGCCCAAGGAAGGGCCCTTCGCTGGCGTCCTCCTGGAGAAGGTGGAGGACCTCATCTCTGGCCTCTTCCTGCCGCTCTACTTCGTGTCGAGTGGCCTCAAGACCAACGTCCTGACCATCAAGGGCGGGGACTCGTGGGGGCTCCTCGTGCTCGTCGTCGCGACGGCGTGCATCGGCAAGATCGGCGGCACAGTGCTCGCGTCGCTCATCGTGCGTGTGCCGCTCCGTGAGGCGGTGACGCTCGGGGTGCTGATGAACACCAAGGGGCTCGTGGAGCTCATCGTGCTCAACATCGGCAAGGACCGGCACGTCCTCAACGACGAGACCTTCGCCATCCTCGTGCTCATGGCGCTCATAAACACCTTCATCACCACGCCGCTGGTGATGGCCATCTACAAGCCGGCGCGGCGCGCCCCCCCGTACAAGAACCGCGCCGTCCAGCGCCCGAACCCCGACGACGAGCTCCGCATGATGGTGTGCTTCCACAGCACGCGAAACATCCCCACCATGATCAACCTCATGGAGTCGTCGCGTGGGACGCGGCGGCGCGGCATCACCGTGTACGCCATGCACCTCGTCGAGCTCTCGGAGCGGTCGTCCGCCATCAACATGGTCCACAAGGCGCGGCGCAACGGGATGCCGTTCTGGAACCGGCGGCGCAACGGGGACGGCGACCAGCTCGTCGTCGCGTTCGAGACGTACCAGCAGCTGAGCCACGTGTCCATTCGCGCCATGACGGCCATCTCCGACCTCCACACCATCCACGAGGACGTGGTCACCAGCGCGCACCAGAAGCGCGCCGCGCTCATCGTGCTCCCCTTCCACAAGCTCCACCAGATGGACGGCCACATGGAGTCCCTCGGCGACGAGTACCAGCACATCAACCAGCGGGTGCTCCACCACGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCGGCGGCGCCGCGCAGGTCGCCGCCAGCGACGTGTCCTACAACATCGTCGTCCTCTTCTTCGGCGGCCGGGACGACCGCGAGGCCCTCTCCTACGCCACGCGCATGGTCGAGCACCCGGGCATCGCACTCCACGTGATACGCTTCGTCCCAGAGTCCGGCGGCGGCGGCGCGAACGACAAAGCCGCGGCGGACGATGCGTTCCTCGCAGAGTTCCGCGGCAAAGTCGCCGGCGGGAACGACTCCATCCGGTACGAGGAGAGGACGTCCAGAGGGAAGGCGGACGTGGTGGAGGCGATCAAGGCGATGGGTCCGACCAACCTGTTCCTCGTTGGACAGGGGTCGCCGTGCGCGCCGCTGATGGAACCGAGCGCTGAGTGCCCGGAGCTCGGGCCGGTGGGGAGCTACCTGGCGATGCCGGACTTCTCGACGGTGGCGTCGGTGCTGGTGATGAAGCAGTACGACCCGACGGCGGAGCACTACGAACTCGTCGAGGAGGTCGCGGACACCGCCGTGGACATCGACACACCGGGGCCTCGTAGAGGGTGATGCCCTTAGTCGTAAGTCGTAATTAACAGGCATATACTTCTACTAATACAAATTGTGTAATATGATAGTGCAATTTAATTGTAGACGTATTTTCATCCCTCAGGAGGATGGACCTTGATCCTCCAATGTGTTTTTACATCTGTTGTACACTTGTAAAATACAATAGTTCTGGAATTTTATGAAAGCACTTGACACAA]


>consensus_2477#1 ACCATCGTGCTCGCCGCCGGCTTCATCACCGACACCATCGGCATCCACGCGCTGTTCGGC GCCTTCATCGTCGGCATCATCGTGCCCAAGGAAGGGCCCTTCGCTGGCGTCCTCCTGGAG AAGGTGGAGGACCTCATCTCTGGCCTCTTCCTGCCGCTCTACTTCGTGTCGAGTGGCCTC AAGACCAACGTCCTGACCATCAAGGGCGGGGACTCGTGGGGGCTCCTCGTGCTCGTCGTC GCGACGGCGTGCATCGGCAAGATCGGCGGCACAGTGCTCGCGTCGCTCATCGTGCGTGTG CCGCTCCGTGAGGCGGTGACGCTCGGGGTGCTGATGAACACCAAGGGGCTCGTGGAGCTC ATCGTGCTCAACATCGGCAAGGACCGGCACGTCCTCAACGACGAGACCTTCGCCATCCTC GTGCTCATGGCGCTCATAAACACCTTCATCACCACGCCGCTGGTGATGGCCATCTACAAG CCGGCGCGGCGCGCCCCCCCGTACAAGAACCGCGCCGTCCAGCGCCCGAACCCCGACGAC GAGCTCCGCATGATGGTGTGCTTCCACAGCACGCGAAACATCCCCACCATGATCAACCTC ATGGAGTCGTCGCGTGGGACGCGGCGGCGCGGCATCACCGTGTACGCCATGCACCTCGTC GAGCTCTCGGAGCGGTCGTCCGCCATCAACATGGTCCACAAGGCGCGGCGCAACGGGATG CCGTTCTGGAACCGGCGGCGCAACGGGGACGGCGACCAGCTCGTCGTCGCGTTCGAGACG TACCAGCAGCTGAGCCACGTGTCCATTCGCGCCATGACGGCCATCTCCGACCTCCACACC ATCCACGAGGACGTGGTCACCAGCGCGCACCAGAAGCGCGCCGCGCTCATCGTGCTCCCC TTCCACAAGCTCCACCAGATGGACGGCCACATGGAGTCCCTCGGCGACGAGTACCAGCAC ATCAACCAGCGGGTGCTCCACCACGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGC CTCGGCGGCGCCGCGCAGGTCGCCGCCAGCGACGTGTCCTACAACATCGTCGTCCTCTTC TTCGGCGGCCGGGACGACCGCGAGGCCCTCTCCTACGCCACGCGCATGGTCGAGCACCCG GGCATCGCACTCCACGTGATACGCTTCGTCCCAGAGTCCGGCGGCGGCGGCGCGAACGAC AAAGCCGCGGCGGACGATGCGTTCCTCGCAGAGTTCCGCGGCAAAGTCGCCGGCGGGAAC GACTCCATCCGGTACGAGGAGAGGACGTCCAGAGGGAAGGCGGACGTGGTGGAGGCGATC AAGGCGATGGGTCCGACCAACCTGTTCCTCGTTGGACAGGGGTCGCCGTGCGCGCCGCTG ATGGAACCGAGCGCTGAGTGCCCGGAGCTCGGGCCGGTGGGGAGCTACCTGGCGATGCCG GACTTCTCGACGGTGGCGTCGGTGCTGGTGATGAAGCAGTACGACCCGACGGCGGAGCAC TACGAACTCGTCGAGGAGGTCGCGGACACCGCCGTGGACATCGACACACCGGGGCCTCGT AGAGGGTGATGCCCTTAGTCGTAAGTCGTAATTAACAGGCATATACTTCTACTAATACAA ATTGTGTAATATGATAGTGCAATTTAATTGTAGACGTATTTTCATCCCTCAGGAGGATGG ACCTTGATCCTCCAATGTGTTTTTACATCTGTTGTACACTTGTAAAATACAATAGTTCTG GAATTTTATGAAAGCACTTGACACAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2477#0      TCTCTCTCTCTCTCTCTCTCTCGTCGACGCGCCGATGCGCCGAGATGGCCCCGATCATGA 60
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      GTGGGGCGGCGGCGGCGGCGGGGGGCACGGGCGGCGCGGTCCCGCTCATCAAGAACGCCA 120
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      CCTCCGCGTCCCAGATGTCGCGTGGCAAGGCCGGCACCGGCGCCGGCGCGGTCGTCTGCT 180
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      ACTCCCCGATGATGGTCACCGCCTACGGCATCTGGCAGGGCGCCTCCCCTCTTGACTTCT 240
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      CCCTCCCCCTCTTCCTCCTCCAGGTCGCCATCATCGTCGCCACCACCCGCCTCCTCGTCA 300
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TCCTCCTCAAGCCCTTCCGCCAGCCTCGCGTCATCGCGGAGATCCTCGCTGGCGTGATAC 360
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TGGGGCCGTCGGTGATGGGGCAGGTTTCGACGTGGGCGGTGAAAGTGTTCCCGGAGCGGA 420
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      GCTTGCTGACGCTGGAGACGGTGGCGCACCTGGGGCTCCTCTACTTCCTCTTCCTGGTCG 480
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      GCCTCGAGATGGACGTGAACACCATCAGGAGGTCGGGGAAGAAGGCGCTCATCATCGCCG 540
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TCGCCGGCATGGCGCTGCCGTTCTGCATCGGCACGGCGACGTCGTTCATCTTCCGGCACC 600
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      AGGTGTCCAAGAACGTGCACCAGGCCTCCTTCCTGCTCTTCCTCGGCGTCGCGCTCTCCG 660
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TCACCGCGTTCCCGGTGCTGGCGCGCATCCTCGCCGAGGTCAAGCTGCTCAACTCCGACC 720
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TCGGCCGGATCGCCATGTCCGCCGCCATCGTCAACGACATGTGCGCCTGGATCCTCCTCG 780
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      CGCTCGCCATCGCCATCTCAGAGGTCAACAGTTCGGCCTTCTCCTCCCTCTGGGTGCTCA 840
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TCGCCGGGGTGGCCTTCGTGCTCGCCTGCTTCTACGTCGTCCGCCCGCTCATGTGGTGGA 900
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      TCGTCCGCCGCGTCCCCGAGGGGGAGGCCATCGGCGACGTGCACATCACGCTCATCCTCA 960
consensus_2477#1      -----------------------------------------------------------A 1
                                                                                 *

consensus_2477#0      CCGGCGTCATGGTCGCCGGCGTCTGCACCGACGCCATCGGCATCCACTCCGTGTTCGGCG 1020
consensus_2477#1      CCATCGTGCTCGCCGCCGGCTTCATCACCGACACCATCGGCATCCACGCGCTGTTCGGCG 61
                      **  ***  * * ******* **  ******* ************** *  *********

consensus_2477#0      CGTTCGTGTACGGCCTCGTCATGCC---GAGCGGCCCGCTCGGCGTCGTGCTAATCGAGA 1077
consensus_2477#1      CCTTCATCGTCGGCATCATCGTGCCCAAGGAAGGGCCCTTCGCTGGCGTCCTCCTGGAGA 121
                      * *** *   **** ** ** ****   *   ** **  ***  * *** **  * ****

consensus_2477#0      AGCTCGAGGACTTCGTCACCGGCCTCCTCCTGCCGCTCTTCTTCGCCATCAGTGGCCTCC 1137
consensus_2477#1      AGGTGGAGGACCTCATCTCTGGCCTCTTCCTGCCGCTCTACTTCGTGTCGAGTGGCCTCA 181
                      ** * ****** ** ** * ****** ************ *****     ********* 

consensus_2477#0      GCACGAACGTGACCAAGGTCCGGGACCCCATCACCGTGGGCCTCCTCGTGCTCGTGTTCG 1197
consensus_2477#1      AGACCAACGTCCTGACCATCAAGGGCGGGGACTCGTGGGGGCTCCTCGTGCTCGTCGTCG 241
                        ** *****    *   **  ** *     * *   *** **************  ***

consensus_2477#0      TCATGGCCAGCTTCGCCAAGATCATGGGCACCATCCTCATCGCCGTCTCCTACAC-CATG 1256
consensus_2477#1      CGACGGCGTGCATCGGCAAGATCGGCGGCACAGTGCTCG-CGTCGCTCATCGTGCGTGTG 300
                        * ***  ** *** *******   *****  * ***  ** **         *   **

consensus_2477#0      ACGTTCCGCGACGGCGTCGCCCTGGGGTTCCTCATGAACACCAGGGGCCTCGTCGAGATG 1316
consensus_2477#1      CCGCTCCGTGAGGCGGTGACGCTCGGGGTGCTGATGAACACCAAGGGGCTCGTGGAGCTC 360
                       ** **** ** *  **  * ** *** * ** ********** *** ***** *** * 

consensus_2477#0      ATCGTCCTCAACATCGGGAGGGACAAGGAGGTGCTCGACGACGAGTCGTTCGCCGTGATG 1376
consensus_2477#1      ATCGTGCTCAACATCGGCAAGGACCGGCACGTCCTCAACGACGAGACCTTCGCCATCCTC 420
                      ***** *********** * ****  * * ** *** ******** * ****** *  * 

consensus_2477#0      GTGCTGGTGTCGGTGGCCATGACGGCGCTGGTCACGCCGGTGGTGACGACGGTGTACCGG 1436
consensus_2477#1      GTGCTCATGGCGCTCATAAACACCTTCATCACCACGCCGCTGGTGATGGCCATCTACAAG 480
                      *****  ** ** *    *  **     *   ******* ****** * *  * ***  *

consensus_2477#0      CCGGCGCGGCGGCTGGTCGGGTACAAGCGGCGGAACCTGCAGCGGTCGAAGCACGACGCG 1496
consensus_2477#1      CCGGCGCGGCGCGCCCCCCCGTACAAGAACCGCGCCGTCCAGCGCCCGAACCCCGACGAC 540
                      ***********      *  *******   **   * * *****  **** * *****  

consensus_2477#0      GAGCTCCGGATGCTGGCGTGCGTGCACACCACCCGCAACGTGCCGTCGATCATCTCGCTG 1556
consensus_2477#1      GAGCTCCGCATGATGGTGTGCTTCCACAGCACGCGAAACATCCCCACCATGATCAACCTC 600
                      ******** *** *** **** * **** *** ** *** * **  * ** ***   ** 

consensus_2477#0      CTCGAGCTCTCCAACCCGACGAAGCGCTCGCCGATCTTCATCTACGCGCTCCACCTCGTC 1616
consensus_2477#1      ATGGAGTCGTCGCGTGGGACGCGGCGGCGCGGCATCACCGTGTACGCCATGCACCTCGTC 660
                       * ***   **      ****  ***       ***  * * *****  * *********

consensus_2477#0      GAGCTCAC----CGGCCG--CGCCTCCAACATGCTC--------GCCGCGCACC---ACT 1659
consensus_2477#1      GAGCTCTCGGAGCGGTCGTCCGCCATCAACATGGTCCACAAGGCGCGGCGCAACGGGATG 720
                      ****** *    *** **  ****  ******* **        ** ***** *   *  

consensus_2477#0      CGGCGTCGAACCCGG-------GCGGCGCCAGCGACCACATCTTCAACGCGTTCGAGAGC 1712
consensus_2477#1      CCGTTCTGGAACCGGCGGCGCAACGGGGACGGCGACCAGCTCGTCGTCGCGTTCGAGACG 780
                      * *    * * ****        *** * * *******  ** **  ***********  

consensus_2477#0      TACGAGGAGATGGTCGGCGGCGTGTCGGTGCAGGCGCTCACGGCGGTGTCGCCGTACCAG 1772
consensus_2477#1      TACCAGCAGCTGA---GCCACGTGTCCATTCGCGCCATGACGGCCATCTCCGACCTCCAC 837
                      *** ** ** **    **  ******  * *  **  * *****  * **      *** 

consensus_2477#0      ACGATGCACGAGGACGTGTGCGTGCTGGCGGAGGACAAGCACGTCTCGCTCATCGTGCTC 1832
consensus_2477#1      ACCATCCACGAGGACGTGGTCACCAGCGCGCACCAGAAGCGCGCCGCGCTCATCGTGCTC 897
                      ** ** ************  *      *** *  * **** ** * **************

consensus_2477#0      CCGTTCCACAAGCAGCAGACGGTGGACGGCGGCATGGAGCCCATCAACGCGTCGCTCCGG 1892
consensus_2477#1      CCCTTCCACAAGCTCCACCAGATGGACGGCCACATGGAGTCCCTCGGCGACGAGTACCAG 957
                      ** **********  **   * ********  ******* ** **  **    *  ** *

consensus_2477#0      GGCTTCAACGAGAGCATCCTCGCGTCGGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGC 1952
consensus_2477#1      CACATCAACCAGCGGGTGCTCCACCACGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGC 1017
                        * ***** ** *  * ***      *********************************

consensus_2477#0      GGCCTCAGCGCCGCCGCGGCGAG-GATGGCGGC--CGTGC---ACCACGTCGCGCTCCTC 2006
consensus_2477#1      GGCCTCGGCGGCGCCGCGCAGGTCGCCGCCAGCGACGTGTCCTACAACATCGTCGTCCTC 1077
                      ****** *** *******  *   *  * * **  ****    ** ** ***   *****

consensus_2477#0      TTCTTCGGCGGGCCCGACGACCGGGAGGGGCTCGCGTACGCGTGGCGGATGGTCGAAAAC 2066
consensus_2477#1      TTCTTCGGCGGCCGGGACGACCGCGAGGCCCTCTCCTACGCCACGCGCATGGTCGAGCAC 1137
                      *********** *  ******** ****  *** * *****   *** ********  **

consensus_2477#0      CCGGGCGTGTGCCTCACCATCGTCCGCTTAATCCCGCCGGGGTACACGGCGCCGGCGACC 2126
consensus_2477#1      CCGGGCATCGCACTCCACGTGATACGCTTCGTCCCA-----GAGTCCGGCGGCGGCGGCG 1192
                      ****** *    ***  * *  * *****  ****      *    ***** ***** * 

consensus_2477#0      TCGCCGCCGCAGCCGCCGATGCCCGCCGCCCACTCCCGCGCCATCAACGTCGTCCCCGAG 2186
consensus_2477#1      CGAACGACAAAGCCGCGG------------------CGGACGATG-----CGTTCCT--- 1226
                          ** *  ****** *                  **  * **      *** **    

consensus_2477#0      GTCGCCAAGAGCGAGCGGCAGATGGACGAGGAGTACCTCAACGAGTTCCGGTCGCGCAAC 2246
consensus_2477#1      --------------------------CGCAGAGTTCCGCGGCAA-----AGTCGC----C 1251
                                                **  **** ** *  * *      *****    *

consensus_2477#0      CTCGGCAACGACGCCATCCTCTACGTCGAGCAGGTGGTGGCCAACAGCGAGGAGACGGTC 2306
consensus_2477#1      GGCGGGAACGACTCCATCCGGTACG------AGGAGAGGACGTCCAGAGGGAAGGCGGAC 1305
                        *** ****** ******  ****      *** *  * *   *** * * ** *** *

consensus_2477#0      GCCGCCATCCGCAGCCAGCTGGACAACGCGCACGAGCTGTACATCGTCGGCCGCCACCCC 2366
consensus_2477#1      GTGGTGGAGGCGATCAAGGCGATGGGTCCGACCAACCTGTTCCTCGTTGGACAG------ 1359
                      *  *        * * **  *       **  * * **** * **** ** *        

consensus_2477#0      GGCGAGGCGAGCTCGCCGCTGACGTCGGCGCTCGCCGAGTGGATGGAGTCGCCGGAGCTC 2426
consensus_2477#1      GGGTCGCCGTGCGCGCCGCTGATGGAACCGAGCGCTGAGTGC---------CCGGAGCTC 1410
                      **   * ** ** ********* *    **  *** *****          *********

consensus_2477#0      GGCCCCATCGGCGACCTCCTCGTCTCCTCCGAGTTCTCCAAGATGGCGTCCGTGCTGGTC 2486
consensus_2477#1      GGGCCGGTGGGGAGCTACCTGGCGATGCCGGACTTCTCGACGGTGGCGTCGGTGCTGGTG 1470
                      ** **  * **   *  *** *      * ** ***** * * ******* ******** 

consensus_2477#0      ATGCAGCAGTACGTCATCACGGCGCCGCTGCCGCCGCCGGTGGCGCTCGCCG-GGCCGCC 2545
consensus_2477#1      ATGAAGCAGTACGACCCGACGGCGGAGCACTACGAACTCGTCGAGGAGGTCGCGGACACC 1530
                      *** ********* *   ******  **        *  ** * *   * ** ** * **

consensus_2477#0      GACGGATGACCCCGTCCGGCAGTATTTGACCAACGCCAA--CCAGCGGCCGTCGGTGGCG 2603
consensus_2477#1      GCCGTGGACATCGACACACCGGGGCCTCGTAGAGGGTGATGCCCTTAGTCGTAAGTCGTA 1590
                      * **       *    *  * *    *     * *   *  **    * ***  ** *  

consensus_2477#0      ATCGGCGGCAACCAGATGGGCGCCGCCGGCCGAGGCGGATGGAGCGGCGGCGCCGGCGGG 2663
consensus_2477#1      ATTAACAGG---CATATACTTCTACTAATACAAATTGTGTAATATGATAGTGCAATTTAA 1647
                      **   * *    ** **             * *   *  *     *   * **       

consensus_2477#0      TACTGACCGGACTCCGATCCGATCGAGCGCTTCGCTGTAATCGCCGTCAGTTAATCGCTC 2723
consensus_2477#1      TTGTAGACGTATTTTCATCCCTCAGGAGGATGGACCTTGATCCTC--CAATGTGTTTTTA 1705
                      *  *   ** * *   ****    *   * *   *  * ***  *  ** *   *   * 

consensus_2477#0      GATTGGTAGTAGTAGGGTTTCGAAGCTTAATTATTTTTAGGAATTAATTATGATTGTTAA 2783
consensus_2477#1      CATCTGTTGTAC----ACTTGTAAAATACAATAGTTCTGGAATTTTATGAAAGCACTTGA 1761
                       **  ** ***       **  **  *  * ** ** * * * ** ** *      ** *

consensus_2477#0      TTAATTTTTGTTGTGTAGTACGGAGTACAATTCTAGGTGATTGTTTTTGTAGATGTCGTG 2843
consensus_2477#1      CACAA------------------------------------------------------- 1766
                         *                                                        

consensus_2477#0      TTTAATTGGTCAGATTCTGTGATCGATCCCTCCTGTAGTGTGAGAGGTGATCGATTACAT 2903
consensus_2477#1      ------------------------------------------------------------
                                                                                  

consensus_2477#0      GTACTACTACGTGTTTTAACTCTTCTAGGTTCTTAACTAATTGTTCTTAGAGATG 2958
consensus_2477#1      -------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)