cluster # 248

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Oryza sativa
cluster # 248 cluster # 248 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_248#0 length = 739 sequences # 2

consensusID : consensus_248#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 739
fasta sequence

                              [CACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTGGGTGCA-CA-TATAGA--CCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTT-CCAGAAGCTGTTGTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAGAAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGAAGGAAATCATTCACTGCTTGAATGGAGATTTTGTTTTGCAAGTTAGAATCACTGAAAGTAAGGCTGATGCAAGGATCATCTGATCCTCTTTTTGTCCATATCCATCAGCAGATTACCATATATGTAAATTATCTAGGCTTAGCATCAGATCTATGCTATGGAAAATGATCTGCCAACTGCCAAGTGCTTCAGCTAGCACACTGCGAGTAAACATAGCCACTGTATCTGTACGTATTATCTTGAGGTAAAGCAATTGATGAGCTTGTCTTGCAAAAAA]

[+] EMBL C97859               [CACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTGGGTGCA CA TATAGA  CCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTT CCAGAAGCTGTTGTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCA                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C97860               [                                                              TGCACCATTTTAGACCCCCATCAAGTCGGAAGTTAACTNTGCTTTATAAGGTTGACCCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTTCCCAGAAGCTGTTGTTGCTCTTGCATAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAGAAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGAAGGAAATCATTCACTGCTTGAATGGAGATTTTGTTTTGCAAGTTAGAATCACTGAAAGTAAGGCTGATGCAAGGATCATCTGATCCTCTTTTTGTCCATATCCATCAGCAGATTACCATATATGTAAATTATCTAGGCTTAGCATCAGATCTATGCTATGGAAAATGATCTGCCAACTGCCAAGTGCTTCAGCTAGCACACTGCGAGTAAACATAGCCACTGTATCTGTACGTATTATCTTGAGGTAAAGCAATTGATGAGCTTGTCTTGCAAAAAA]




>consensus_248#0
CACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTG
GGTGCACATATAGACCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGT
GCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTTCCAGAAGCTGTT
GTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTT
TCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGAT
GTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTA
GACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAG
AAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGAAGGAAATCATTCACTGCT
TGAATGGAGATTTTGTTTTGCAAGTTAGAATCACTGAAAGTAAGGCTGATGCAAGGATCA
TCTGATCCTCTTTTTGTCCATATCCATCAGCAGATTACCATATATGTAAATTATCTAGGC
TTAGCATCAGATCTATGCTATGGAAAATGATCTGCCAACTGCCAAGTGCTTCAGCTAGCA
CACTGCGAGTAAACATAGCCACTGTATCTGTACGTATTATCTTGAGGTAAAGCAATTGAT
GAGCTTGTCTTGCAAAAAA

clustalw multiple alignements is not computed in this case