cluster # 250

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Oryza sativa
cluster # 250 cluster # 250 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_250#0 length = 1996 sequences # 2
consensusID : consensus_250#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1996
fasta sequence
                              [CAAACCAAAATTAACCAAACCCCCGCGCCGTTAACCCTCTGAGCTTGTGATGAATTAACGATCGTGACCGATCAAGTGAGCGATTAATAATAACCCAGCGGCACACAATTAAGCAATGCAAGAAGCCGTCGTCGTTAACACCGGCGGCCGGTGGGCACCAACCCGTATTTATATACACTTCTATCCGGCCAAAGCAGCGGGCGCGGCCGGGTAACCCAACCACACACGCACGACACGAAGAACGCCATGGCGAAGCAGGCGTGGAGCTCGCTGTTCGGGTGCTTCACCTCGCACCACGACGGCGGCGGCAAGAGGAAGAAAGGCGGCGGCGGCGGGAAGAAGGCGAAGAAGAAGGTGGCGGCGGCGGCGAGCCAGAAGCAGCGGAAGCTGCAGAGCCGGCTGTCGTTCTCCGACCTGTCGTTCGGAGGGATGGTGTCGCCGGAGGACCTGTCGCTGTCGCTGGCCGGGTCGAACCTCCACGTCTTCACCATCGCCGAGCTCCGCGCCGTCACCAGGGACTTCTCCATGACCAACTTCATCGGCGAGGGCGGCTTCGGCCCTGTCTACAAGGGCTACGTCGACGACAAGCTCAAGCCCGGCCTCCGCGCGCAGCCCGTCGCCGTCAAGCTCCTCGACCTCGAGGGCACACAGGGACACAACGAGTGGCTGACTGAAGTCATCTTTCTGGGGCAACTGAGGCATCCTCACCTCGTCAAACTGATCGGCTACTGCTACGAGGATGAACACAGACTTCTCGTTTACGAGTTCATGACGAGGGGCAGCTTGGAGAAGCATCTCTTCAAAAAGTACGCAGCGTCGTTGCCATGGTCAACACGGTTGAAGATCGCCATAGGTGCCGCGAAAGGGTTGGCCTTTCTCCATGAAGCCGAGAAGCCGGTCATCTACCGAGACTTCAAGACCTCCAACATCTTGCTAGACTCGGACTTCAAAGCCAAGCTCTCAGATTTCGGGCTAGCGAAGGACGGGCCAGAGGATGACGAGACGCATGTCTCGACACGTGTCATGGGCACACAGGGATACGCTGCACCAGAGTACATCATGACAGGGCATCTGACGGCGAAGAGCGACGTGTACGGCTTCGGCGTGGTGCTGCTGGAGCTGCTGTCGGGGAGGAAGTCGGTGGACAAGAGCCGGCCGGCGCGGGAGCAGAACCTGGTGGAGTGGGCCCGGCCGTACCTGACCGACGCGCGGCGGCTGGGCCGCGTCATGGACCGCAACCTCGCCGGCCAGTACCCGGCCAAGGCGGCGCAGAAGGCCGCCGCGCTGGCGCACCGCTGCGTCAGCCTCAACCCCAAGTCCCGCCCCCACATGTCCGCCGTCGTCGAGGCGCTCGAGCCGCTCCTCGCCCTCGACGACGACTGCCTCGTCGGCACCTTCGTCTACGTCGCGCCGCCCGACGACGTCGCCGCCAACGGCGACGGCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGC-------GGCC-GATGGTGTGCAGCGGGAATGACTCGGTTTTGCTTGCGTTTGTCTGTACTCGTCGAGCTACGTGCTGATCAAGCGATGCCGGTAAATTAATCCGGATCAGTGAGTTGGCTCGTGGGTAAAAAATGATTGTGGATTTGAAGCATGTTATTATTTGTCTTAGGCTTGAATAGCAGAATAGGATTAGAGCGTGTAAATACGAGCATGTCAGACGTACATGAGCAAATTGAGCATGTAAACAGTTTGACAAAATATGGATGGTTTATCACTTCTCATGTTGGGAGGTTTCTCTAGTATCTTCCCAGCGCCGTGAAATATCTCTGTTGATAGACACTGTATGCTGTACGCGAGTATGTTTTTACTGTTTGCTGAAAGACTGTAGGTTTTCTCCGTGTGCACTGTATTTAAATTTTGAGAAGCTGCAAGGATTTAGTAATGGTAATGTTGGTGGTGTACGGTGTGGGAATGCAATACAACTGTAACAATTGGACAAAAAA]

[+] EMBL AK107046             [CAAACCAAAATTAACCAAACCCCCGCGCCGTTAACCCTCTGAGCTTGTGATGAATTAACGATCGTGACCGATCAAGTGAGCGATTAATAATAACCCAGCGGCACACAATTAAGCAATGCAAGAAGCCGTCGTCGTTAACACCGGCGGCCGGTGGGCACCAACCCGTATTTATATACACTTCTATCCGGCCAAAGCAGCGGGCGCGGCCGGGTAACCCAACCACACACGCACGACACGAAGAACGCCATGGCGAAGCAGGCGTGGAGCTCGCTGTTCGGGTGCTTCACCTCGCACCACGACGGCGGCGGCAAGAGGAAGAAAGGCGGCGGCGGCGGGAAGAAGGCGAAGAAGAAGGTGGCGGCGGCGGCGAGCCAGAAGCAGCGGAAGCTGCAGAGCCGGCTGTCGTTCTCCGACCTGTCGTTCGGAGGGATGGTGTCGCCGGAGGACCTGTCGCTGTCGCTGGCCGGGTCGAACCTCCACGTCTTCACCATCGCCGAGCTCCGCGCCGTCACCAGGGACTTCTCCATGACCAACTTCATCGGCGAGGGCGGCTTCGGCCCTGTCTACAAGGGCTACGTCGACGACAAGCTCAAGCCCGGCCTCCGCGCGCAGCCCGTCGCCGTCAAGCTCCTCGACCTCGAGGGCACACAGGGACACAACGAGTGGCTGACTGAAGTCATCTTTCTGGGGCAACTGAGGCATCCTCACCTCGTCAAACTGATCGGCTACTGCTACGAGGATGAACACAGACTTCTCGTTTACGAGTTCATGACGAGGGGCAGCTTGGAGAAGCATCTCTTCAAAAAGTACGCAGCGTCGTTGCCATGGTCAACACGGTTGAAGATCGCCATAGGTGCCGCGAAAGGGTTGGCCTTTCTCCATGAAGCCGAGAAGCCGGTCATCTACCGAGACTTCAAGACCTCCAACATCTTGCTAGACTCGGACTTCAAAGCCAAGCTCTCAGATTTCGGGCTAGCGAAGGACGGGCCAGAGGATGACGAGACGCATGTCTCGACACGTGTCATGGGCACACAGGGATACGCTGCACCAGAGTACATCATGACAGGGCATCTGACGGCGAAGAGCGACGTGTACGGCTTCGGCGTGGTGCTGCTGGAGCTGCTGTCGGGGAGGAAGTCGGTGGACAAGAGCCGGCCGGCGCGGGAGCAGAACCTGGTGGAGTGGGCCCGGCCGTACCTGACCGACGCGCGGCGGCTGGGCCGCGTCATGGACCGCAACCTCGCCGGCCAGTACCCGGCCAAGGCGGCGCAGAAGGCCGCCGCGCTGGCGCACCGCTGCGTCAGCCTCAACCCCAAGTCCCGCCCCCACATGTCCGCCGTCGTCGAGGCGCTCGAGCCGCTCCTCGCCCTCGACGACGACTGCCTCGTCGGCACCTTCGTCTACGTCGCGCCGCCCGACGACGTCGCCGCCAACGGCGACGGCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGC       GGCC GATGGTGTGCAGCGGGAATGACTCGGTTTTGCTTGCGTTTGTCTGTACTCGTCGAGCTACGTGCTGATCAAGCGATGCCGGTAAATTAATCCGGATCAGTGAGTTGGCTCGTGGGTAAAAAATGATTGTGGATTTGAAGCATGTTATTATTTGTCTTAGGCTTGAATAGCAGAATAGGATTAGAGCGTGTAAATACGAGCATGTCAGACGTACATGAGCAAATTGAGCATGTAAACAGTTTGACAAAATATGGATGGTTTATCACTTCTCATGTTGGGAGGTTTCTCTAGTATCTTCC                                                                                                                                                                                                   ]
[+] EMBL BQ907015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGCGAC GCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGCGGCGGCAGGCCAGATGGTGTGCAGCGGGAATGACTCGGTTTTGCTTGCGTTTGTCTGTACTCGTCGAGCTACGTGCTGATCAAGCGATGCCGGTAAATTAATCCGGATCAGTGAGTTGGCTCGTGGGTAAAAAATGATTGTGGATTTGAAGCATGTTATTATTTGTCTTAGGCTTGAATAGCAGAATAGGATTAGAGCGTGTAAATACGAGCATGTCAGACGTACATGAGCAAATTGAGCATGTAAACAGTTTGACAAAATATGGATGGTTCATCACTTCTCATGTTGGGAGGTTTCTCTAGTATCTTCCCAGCGCCGTGAAATATCTCTGTTGATAGACACTGTATGCTGTACGCGAGTATGTTTTTACTGTTTGCTGAAAGACTGTAGGTTTTCTCCGTGTGCACTGTATTTAAATTTTGAGAAGCTGCAAGGATTTAGTAATGGTAATGTTGGTGGTGTACGGTGTGGGAATGCAATACAACTGTAACAATTGGACAAAAAA]




>consensus_250#0
CAAACCAAAATTAACCAAACCCCCGCGCCGTTAACCCTCTGAGCTTGTGATGAATTAACG
ATCGTGACCGATCAAGTGAGCGATTAATAATAACCCAGCGGCACACAATTAAGCAATGCA
AGAAGCCGTCGTCGTTAACACCGGCGGCCGGTGGGCACCAACCCGTATTTATATACACTT
CTATCCGGCCAAAGCAGCGGGCGCGGCCGGGTAACCCAACCACACACGCACGACACGAAG
AACGCCATGGCGAAGCAGGCGTGGAGCTCGCTGTTCGGGTGCTTCACCTCGCACCACGAC
GGCGGCGGCAAGAGGAAGAAAGGCGGCGGCGGCGGGAAGAAGGCGAAGAAGAAGGTGGCG
GCGGCGGCGAGCCAGAAGCAGCGGAAGCTGCAGAGCCGGCTGTCGTTCTCCGACCTGTCG
TTCGGAGGGATGGTGTCGCCGGAGGACCTGTCGCTGTCGCTGGCCGGGTCGAACCTCCAC
GTCTTCACCATCGCCGAGCTCCGCGCCGTCACCAGGGACTTCTCCATGACCAACTTCATC
GGCGAGGGCGGCTTCGGCCCTGTCTACAAGGGCTACGTCGACGACAAGCTCAAGCCCGGC
CTCCGCGCGCAGCCCGTCGCCGTCAAGCTCCTCGACCTCGAGGGCACACAGGGACACAAC
GAGTGGCTGACTGAAGTCATCTTTCTGGGGCAACTGAGGCATCCTCACCTCGTCAAACTG
ATCGGCTACTGCTACGAGGATGAACACAGACTTCTCGTTTACGAGTTCATGACGAGGGGC
AGCTTGGAGAAGCATCTCTTCAAAAAGTACGCAGCGTCGTTGCCATGGTCAACACGGTTG
AAGATCGCCATAGGTGCCGCGAAAGGGTTGGCCTTTCTCCATGAAGCCGAGAAGCCGGTC
ATCTACCGAGACTTCAAGACCTCCAACATCTTGCTAGACTCGGACTTCAAAGCCAAGCTC
TCAGATTTCGGGCTAGCGAAGGACGGGCCAGAGGATGACGAGACGCATGTCTCGACACGT
GTCATGGGCACACAGGGATACGCTGCACCAGAGTACATCATGACAGGGCATCTGACGGCG
AAGAGCGACGTGTACGGCTTCGGCGTGGTGCTGCTGGAGCTGCTGTCGGGGAGGAAGTCG
GTGGACAAGAGCCGGCCGGCGCGGGAGCAGAACCTGGTGGAGTGGGCCCGGCCGTACCTG
ACCGACGCGCGGCGGCTGGGCCGCGTCATGGACCGCAACCTCGCCGGCCAGTACCCGGCC
AAGGCGGCGCAGAAGGCCGCCGCGCTGGCGCACCGCTGCGTCAGCCTCAACCCCAAGTCC
CGCCCCCACATGTCCGCCGTCGTCGAGGCGCTCGAGCCGCTCCTCGCCCTCGACGACGAC
TGCCTCGTCGGCACCTTCGTCTACGTCGCGCCGCCCGACGACGTCGCCGCCAACGGCGAC
GGCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGCG
GCCGATGGTGTGCAGCGGGAATGACTCGGTTTTGCTTGCGTTTGTCTGTACTCGTCGAGC
TACGTGCTGATCAAGCGATGCCGGTAAATTAATCCGGATCAGTGAGTTGGCTCGTGGGTA
AAAAATGATTGTGGATTTGAAGCATGTTATTATTTGTCTTAGGCTTGAATAGCAGAATAG
GATTAGAGCGTGTAAATACGAGCATGTCAGACGTACATGAGCAAATTGAGCATGTAAACA
GTTTGACAAAATATGGATGGTTTATCACTTCTCATGTTGGGAGGTTTCTCTAGTATCTTC
CCAGCGCCGTGAAATATCTCTGTTGATAGACACTGTATGCTGTACGCGAGTATGTTTTTA
CTGTTTGCTGAAAGACTGTAGGTTTTCTCCGTGTGCACTGTATTTAAATTTTGAGAAGCT
GCAAGGATTTAGTAATGGTAATGTTGGTGGTGTACGGTGTGGGAATGCAATACAACTGTA
ACAATTGGACAAAAAA
clustalw multiple alignements is not computed in this case