cluster # 2500

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Oryza sativa
cluster # 2500 cluster # 2500 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2500#0 length = 941 sequences # 2

consensusID : consensus_2500#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 941
fasta sequence

                              [GGTCTCGAGTTTTTTTTTTTTTTTTTTATGCCTTGTGATTAATCTTTTTTATATCTTGAAGAAATCAGTAGCATGGGAATAAAGGAAGGAGATCTTACATATTGGATCGGAAGGCAATGGAGTGAAAGTGTCACGCAACCAAGATAATTAGCTTGTGATCCTACTTTTAAGACAAGTACGTGCAAAAACACCATCAATTGGCTCACAAGTACGCATGCACGATGAAGAACAAAAGAGCAAAGTGCTTATTATTCGATCCGGCACGAATCTCGAGGCACGGAAAGTAGTGATATCAGCACGACAGCACCTCACCTTCAACTTACAGCCTTCCAAGGGAAATAAATCCATAGCTCATATCCGCTGTTGCCTCAACAAGAAGGCCTACTGCTACTTCACAAATACTGCATTCTTTTCTCCAACTTAGCTGTAGTGCTTTGTCATGAAGAATTATGGATCAAAATGCACCTGCTTTTGATCAAATGGTAAATGCAATTTGAACTACATGAAAAGAGGACGCCGCGAAAAC-AAGCTTCAGTTGGTACCCATAGCCAAAGAACATTTCAGGAGCACCCTAGACAAGGCAACCAGCACATCAGCCTTTTGGGTTGAAAGGACTTCGGAATCGGAATTGGAGAAGAACTTGTGAAGTGAAGCCCACCTTTTTTTTTTTTTTTGGAAATGGGAGTTTTGCTTGGAGAGAGAGAGAAGCAGCCGGGAGAAGCAACTGTAGGGTTTTATCCTCTCTAAGAGCAAGGATAATAATACAGCTAGCTGCTTACTGGATAGATCTTTATAGTCTATCTCTTAACTCACTTATATAGTGGTTAACTCTTCACTATAAATATATGGCCCACCTGTCTGTATCACAGATTTTCTTGGCTCCTGCGCCTAAGCCGACTGTAAACTTACACCCCGCTTCTCATCTCTCTCCTCTGCTCTCT]

[+] EMBL CF306712             [GGTCTCGAGTTTTTTTTTTTTTTTTTTATGCCTTGTGATTAATCTTTTTTATATCTTGAAGAAATCAGTAGCATGGGAATAAAGGAAGGAGATCTTACATATTGGATCGGAAGGCAATGGAGTGAAAGTGTCACGCAACCAAGATAATTAGCTTGTGATCCTACTTTTAAGACAAGTACGTGCAAAAACACCATCAATTGGCTCACAAGTACGCATGCACGATGAAGAACAAAAGAGCAAAGTGCTTATTATTCGATCCGGCACGAATCTCGAGGCACGGAAAGTAGTGATATCAGCACGACAGCACCTCACCTTCAACTTACAGCCTTCCAAGGGAAATAAATCCATAGCTCATATCCGCTGTTGCCTCAACAAGAAGGCCTACTGCTACTTCACAAATACTGCATTCTTTTCTCCAACTTAGCTGTAGTGCTTTGTCATGAAGAATTATGGATCAAAATGCACCTGCTTTTGATCAAATGGTAAATGCAATTTGAACTACATGAAAAGAGGACGCCGCGAAAAC AAGCTTCAGT                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB669017             [                                                                                                                                                                                                                      tccttttaaGAAGAACAAAAGAGCAAAGTGCTTATTATTCGACCTGGCACGAATCTCGAGGCACGGAAAGTAGTGATATCAGCACGACAGCACCTCACCTTCAACTTACAGCCTTCCAAGGGAAATAAATCCATAGCTCATATCCGCTGTTGCCTCAACAAGAAGGCCTACTGCTACTTCACAAATACTGCATTCTTTTCTCCAACTTAGCTGTAGTGCTTTGTCATGAAGAATTATGGATCAAAATGCACCTGCTTTTGATCAAATGGTAAATGCAATTTGAACTACATGAAAAGAGGACGCCGCGAAAACAAAGCTTCAGTTGGTACCCATAGCCAAAGAACATTTCAGGAGCACCCTAGACAAGGCAACCAGCACATCAGCCTTTTGGGTTGAAAGGACTTCGGAATCGGAATTGGAGAAGAACTTGTGAAGTGAAGCCCACCTTTTTTTTTTTTTTTGGAAATGGGAGTTTTGCTTGGAGAGAGAGAGAAGCAGCCGGGAGAAGCAACTGTAGGGTTTTATCCTCTCTAAGAGCAAGGATAATAATACAGCTAGCTGCTTACTGGATAGATCTTTATAGTCTATCTCTTAACTCACTTATATAGTGGTTAACTCTTCACTATAAATATATGGCCCACCTGTCTGTATCACAGATTTTCTTGGCTCCTGCGCCTAAGCCGACTGTAAACTTACACCCCGCTTCTCATCTCTCTCCTCTGCTCTCT]




>consensus_2500#0
GGTCTCGAGTTTTTTTTTTTTTTTTTTATGCCTTGTGATTAATCTTTTTTATATCTTGAA
GAAATCAGTAGCATGGGAATAAAGGAAGGAGATCTTACATATTGGATCGGAAGGCAATGG
AGTGAAAGTGTCACGCAACCAAGATAATTAGCTTGTGATCCTACTTTTAAGACAAGTACG
TGCAAAAACACCATCAATTGGCTCACAAGTACGCATGCACGATGAAGAACAAAAGAGCAA
AGTGCTTATTATTCGATCCGGCACGAATCTCGAGGCACGGAAAGTAGTGATATCAGCACG
ACAGCACCTCACCTTCAACTTACAGCCTTCCAAGGGAAATAAATCCATAGCTCATATCCG
CTGTTGCCTCAACAAGAAGGCCTACTGCTACTTCACAAATACTGCATTCTTTTCTCCAAC
TTAGCTGTAGTGCTTTGTCATGAAGAATTATGGATCAAAATGCACCTGCTTTTGATCAAA
TGGTAAATGCAATTTGAACTACATGAAAAGAGGACGCCGCGAAAACAAGCTTCAGTTGGT
ACCCATAGCCAAAGAACATTTCAGGAGCACCCTAGACAAGGCAACCAGCACATCAGCCTT
TTGGGTTGAAAGGACTTCGGAATCGGAATTGGAGAAGAACTTGTGAAGTGAAGCCCACCT
TTTTTTTTTTTTTTGGAAATGGGAGTTTTGCTTGGAGAGAGAGAGAAGCAGCCGGGAGAA
GCAACTGTAGGGTTTTATCCTCTCTAAGAGCAAGGATAATAATACAGCTAGCTGCTTACT
GGATAGATCTTTATAGTCTATCTCTTAACTCACTTATATAGTGGTTAACTCTTCACTATA
AATATATGGCCCACCTGTCTGTATCACAGATTTTCTTGGCTCCTGCGCCTAAGCCGACTG
TAAACTTACACCCCGCTTCTCATCTCTCTCCTCTGCTCTCT

clustalw multiple alignements is not computed in this case