cluster # 2519

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Oryza sativa
cluster # 2519 cluster # 2519 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2519#0 length = 613 sequences # 2

consensusID : consensus_2519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 613
fasta sequence

                              [GGATGTGANCCGCGACCAAAATGTACTGAACACACACAAATTACTGAAACAGTAACTACTGAAATAGTAACATGAATCCTCAGGCTACTGAACTGACCACCAATCCCCATTCAAATTACTGAACTGACCATCAAATTACTGAAATAGTAACATATTTTTCCCCATACTCAAATTACTGAAACAGTAACATTTTTTTTTTCATGCAGGCACTGTCGCGAGTTCAAGAGTTCCTTGGAGTTCCAGCGATGAGGTTGTCCAGCAGGCATGTGAAGATCCACACAAGCCCTCTTCCTGACCTTGTTGATAATTGGGAGGAAGTGAGCGAGAAGCTAAAT-GGGACAGAGTACGCTCGTTTTGTTGATGGTGCAGATTATGACAAGTGATATTT-GTTT-GATTTCATCA-GGATCCAATAGTTTTTTTGTTTTTTTTGAGGGAATCAGGATCCAATAGTTGATACTTGATAGCTTCATTTTACACAAAGGGGATTTGAAAGTTGTTTCTTTTTTATTCCTTTCAAAAGTATAGGGATCCTTTTGGTAGAAAGAACTACACAAGTTACATAGAGGAGGAAAGAAATGAAGGAATATGAGTTTTTTTTGTCCGTTTTAAAAAA]

[+] EMBL AU100909             [GGATGTGANCCGCGACCAAAATGTACTGAACACACACAAATTACTGAAACAGTAACTACTGAAATAGTAACATGAATCCTCAGGCTACTGAACTGACCACCAATCCCCATTCAAATTACTGAACTGACCATCAAATTACTGAAATAGTAACATATTTTTCCCCATACTCAAATTACTGAAACAGTAACATTTTTTTTTTCATGCAGGCACTGTCGCGAGTTCAAGAGTTCCTTGGAGTTCCAGCGATGAGGTTGTCCAGCAGGCATGTGAAGATCCACACAAGCCCTCTTCCTGACCTTGTTGATAATTGGGAGGAAGTGAGCGAGAAGCTAAAT GGGACAGAGTACGCTCGTTTTGTTGATGGTGCAGATTATGACAAGTGATATTT GTTT GATTTCATCA GGATCCAATAGTTTTTTTGTTTTTTTTGAGGGAATCAGGATCCAATAGTTGATACTTGATAGCTTCATTTTACACAAAGGGGATTTGAAAGTTGTTTCTTTTTTATTCCTTTCAAAAGTATAGGGATCCTTTTGGTAGAAAGAACTACACAAGTTACATAGAGGAGGAAAGAAATGAAGGAATATGAGTTTTTTTTGTCCGTTTTAAAAAA]
[+] EMBL C27967               [GGATGTGATCCGCGACCAAAATGTACTGAACACACACAAATTACTGAAACAGTAACTACTGAAATAGTAACATGAATCCTCAGGCTACTGAACTGACCACCAATCCCCATTCAAATTACTGAACTGACCATCAAATTACTGAAATAGTAACATATTTTTCCCCATACTCAAATTACTGAAACAGTAACATTTTTTTTTTCATGCAGGCACTGTCGCGAGTTCAAGAGTTCCTTGGAGTTCCAGCGATGAGGTTGTCCAGCAGGCATGTGAAGATCCACACAAGCCCTCTTCCTGACCTTGTTGATAATTGGGAGGAAGTGAGCGAGAAGCTAAATGGGGACAGAGTACGCTCGTTTTGTTGATGGNGCAGATTATGACAAGTGATATTTGGTTTGGANTTCATCAGGGANCCAATAGgtn                                                                                                                                                                                                     ]




>consensus_2519#0
GGATGTGANCCGCGACCAAAATGTACTGAACACACACAAATTACTGAAACAGTAACTACT
GAAATAGTAACATGAATCCTCAGGCTACTGAACTGACCACCAATCCCCATTCAAATTACT
GAACTGACCATCAAATTACTGAAATAGTAACATATTTTTCCCCATACTCAAATTACTGAA
ACAGTAACATTTTTTTTTTCATGCAGGCACTGTCGCGAGTTCAAGAGTTCCTTGGAGTTC
CAGCGATGAGGTTGTCCAGCAGGCATGTGAAGATCCACACAAGCCCTCTTCCTGACCTTG
TTGATAATTGGGAGGAAGTGAGCGAGAAGCTAAATGGGACAGAGTACGCTCGTTTTGTTG
ATGGTGCAGATTATGACAAGTGATATTTGTTTGATTTCATCAGGATCCAATAGTTTTTTT
GTTTTTTTTGAGGGAATCAGGATCCAATAGTTGATACTTGATAGCTTCATTTTACACAAA
GGGGATTTGAAAGTTGTTTCTTTTTTATTCCTTTCAAAAGTATAGGGATCCTTTTGGTAG
AAAGAACTACACAAGTTACATAGAGGAGGAAAGAAATGAAGGAATATGAGTTTTTTTTGT
CCGTTTTAAAAAA

clustalw multiple alignements is not computed in this case