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Oryza sativa
cluster # 2535 cluster # 2535       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2535#0 length = 2303 sequences # 1  
consensus_2535#1 length = 1532 sequences # 1  

consensusID : consensus_2535#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2303
fasta sequence
                              [CCTCCTCTCCCTCTCTCTTTTTTAGTTCGCCGCCGAACTCTCCAAAACCCCCACGAAAACCCTCGCTTCCCACCGACTCCATGTGGCGCCTCCGGTCGCGGACGGCGGCGGCGGCGGCCGTCATTGCCGCGTCCGCGGCGTCGCTCGCCGACGTCGCCTACGCGGACAGCGGCTACTCCTTCTTCCGCCGCAGCTCCCCCCCGCCTCCACCTCCCGCCGCCGCCGCCGCCGCCGCTGCTTCGGAGGACTCTGGCACGGAGGTGGCCGTCGAGGTGGATTCCAGCGGGTTCGACCCCGAGAGCCTGGAGCGGGCGGCCAGGTTGCTGCGGAAGCTCAACTCGTCGAAATACGCGAAGCAGCTGTTTGAGCTGATGCGCATGCAGGAGAAGACCCGGCTTGCGGAGCTGGAGGCCGAGAAGGTTCAGTACATCATCCAACAACACCTCAGGGACATTGAGAGGCAACAGAAAGAAGGTGAAAAATTCAGAGAGAGTTTGCAGCAGCAAGCTCAAGCAGAGGCACAAAAGTTACGTTATGACGATGAATTAGCTAGGAAAAGAATGCAGACGGAGCGTGAAGCACAAAGGCGACAGGATGCAGAACTTGTGAAGATGCAAGAGGCAGCTGCCCTTAGGAAAGAAGAAGTTAGGCGTACCACAGAAAAGAAGATTTTAGAAAAAATGCTAGAGGATGAGAAAGAAAAGGCTCTCTTAAAGAAACAAAATATCCAAGCTAACGCTGAAGCAAAAGGTGAAGCCCTTACTCGTGAAGCAAAGGCTTTAGAAGACTACAACAGAAAGATGCTCCTGGAACGTATAAATGGCGACAAAGAGAAGTGGATTGCTGCAATAAATACTACTTTTTCACACATTGAAGGTGGGTTTAGGATGCTGTTGACTGACAGGAGTAAATTATTGATGGGTGTTGGAGGAGTTACTGCGCTCGCTGCTGGAATTTATACTACCAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGGAGATGGCACGCAAATCTGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGCGCAACAGCACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGATGCTGCTATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTTTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATCTACTGTCCCCATATATATGTTCTGATATGAGGAATGGAGTGAGATATAGTCAGTTTCCTCCAGCTGACTTCGATAGAAGTTGAAATTTAGAACACACCGGATACTGATGTTCTTCTTTGCGGGGGGTATGACCTAGGCTTGTCCGGTTCCAATTTTGTTCCATCTCTTTGCCTGTAGCATATTTATGGTGGTTTTTATGGAAATACAGGCAAATAGGTAAGACTGAGATGCGCATGCTGAAAATCTTATTTGACTGAAGTGGTTCAACCATTCATCTTATTTGTTAGAATTTGATTTTGTCTTCATTATCATAGATGATGAAAAGTT]

[+] EMBL AK073092             [CCTCCTCTCCCTCTCTCTTTTTTAGTTCGCCGCCGAACTCTCCAAAACCCCCACGAAAACCCTCGCTTCCCACCGACTCCATGTGGCGCCTCCGGTCGCGGACGGCGGCGGCGGCGGCCGTCATTGCCGCGTCCGCGGCGTCGCTCGCCGACGTCGCCTACGCGGACAGCGGCTACTCCTTCTTCCGCCGCAGCTCCCCCCCGCCTCCACCTCCCGCCGCCGCCGCCGCCGCCGCTGCTTCGGAGGACTCTGGCACGGAGGTGGCCGTCGAGGTGGATTCCAGCGGGTTCGACCCCGAGAGCCTGGAGCGGGCGGCCAGGTTGCTGCGGAAGCTCAACTCGTCGAAATACGCGAAGCAGCTGTTTGAGCTGATGCGCATGCAGGAGAAGACCCGGCTTGCGGAGCTGGAGGCCGAGAAGGTTCAGTACATCATCCAACAACACCTCAGGGACATTGAGAGGCAACAGAAAGAAGGTGAAAAATTCAGAGAGAGTTTGCAGCAGCAAGCTCAAGCAGAGGCACAAAAGTTACGTTATGACGATGAATTAGCTAGGAAAAGAATGCAGACGGAGCGTGAAGCACAAAGGCGACAGGATGCAGAACTTGTGAAGATGCAAGAGGCAGCTGCCCTTAGGAAAGAAGAAGTTAGGCGTACCACAGAAAAGAAGATTTTAGAAAAAATGCTAGAGGATGAGAAAGAAAAGGCTCTCTTAAAGAAACAAAATATCCAAGCTAACGCTGAAGCAAAAGGTGAAGCCCTTACTCGTGAAGCAAAGGCTTTAGAAGACTACAACAGAAAGATGCTCCTGGAACGTATAAATGGCGACAAAGAGAAGTGGATTGCTGCAATAAATACTACTTTTTCACACATTGAAGGTGGGTTTAGGATGCTGTTGACTGACAGGAGTAAATTATTGATGGGTGTTGGAGGAGTTACTGCGCTCGCTGCTGGAATTTATACTACCAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGGAGATGGCACGCAAATCTGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGCGCAACAGCACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGATGCTGCTATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTTTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATCTACTGTCCCCATATATATGTTCTGATATGAGGAATGGAGTGAGATATAGTCAGTTTCCTCCAGCTGACTTCGATAGAAGTTGAAATTTAGAACACACCGGATACTGATGTTCTTCTTTGCGGGGGGTATGACCTAGGCTTGTCCGGTTCCAATTTTGTTCCATCTCTTTGCCTGTAGCATATTTATGGTGGTTTTTATGGAAATACAGGCAAATAGGTAAGACTGAGATGCGCATGCTGAAAATCTTATTTGACTGAAGTGGTTCAACCATTCATCTTATTTGTTAGAATTTGATTTTGTCTTCATTATCATAGATGATGAAAAGTT]


>consensus_2535#0 CCTCCTCTCCCTCTCTCTTTTTTAGTTCGCCGCCGAACTCTCCAAAACCCCCACGAAAAC CCTCGCTTCCCACCGACTCCATGTGGCGCCTCCGGTCGCGGACGGCGGCGGCGGCGGCCG TCATTGCCGCGTCCGCGGCGTCGCTCGCCGACGTCGCCTACGCGGACAGCGGCTACTCCT TCTTCCGCCGCAGCTCCCCCCCGCCTCCACCTCCCGCCGCCGCCGCCGCCGCCGCTGCTT CGGAGGACTCTGGCACGGAGGTGGCCGTCGAGGTGGATTCCAGCGGGTTCGACCCCGAGA GCCTGGAGCGGGCGGCCAGGTTGCTGCGGAAGCTCAACTCGTCGAAATACGCGAAGCAGC TGTTTGAGCTGATGCGCATGCAGGAGAAGACCCGGCTTGCGGAGCTGGAGGCCGAGAAGG TTCAGTACATCATCCAACAACACCTCAGGGACATTGAGAGGCAACAGAAAGAAGGTGAAA AATTCAGAGAGAGTTTGCAGCAGCAAGCTCAAGCAGAGGCACAAAAGTTACGTTATGACG ATGAATTAGCTAGGAAAAGAATGCAGACGGAGCGTGAAGCACAAAGGCGACAGGATGCAG AACTTGTGAAGATGCAAGAGGCAGCTGCCCTTAGGAAAGAAGAAGTTAGGCGTACCACAG AAAAGAAGATTTTAGAAAAAATGCTAGAGGATGAGAAAGAAAAGGCTCTCTTAAAGAAAC AAAATATCCAAGCTAACGCTGAAGCAAAAGGTGAAGCCCTTACTCGTGAAGCAAAGGCTT TAGAAGACTACAACAGAAAGATGCTCCTGGAACGTATAAATGGCGACAAAGAGAAGTGGA TTGCTGCAATAAATACTACTTTTTCACACATTGAAGGTGGGTTTAGGATGCTGTTGACTG ACAGGAGTAAATTATTGATGGGTGTTGGAGGAGTTACTGCGCTCGCTGCTGGAATTTATA CTACCAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTT CACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAAT CTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCAC TGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCAC CATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGG AGATGGCACGCAAATCTGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCT TAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGA AGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGCGCAACAGCACCC ACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGT CGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGATGCTGCTATTA CGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGC TGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTTTGGG ACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGC TCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGG CCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTA TGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGA CTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATCTACT GTCCCCATATATATGTTCTGATATGAGGAATGGAGTGAGATATAGTCAGTTTCCTCCAGC TGACTTCGATAGAAGTTGAAATTTAGAACACACCGGATACTGATGTTCTTCTTTGCGGGG GGTATGACCTAGGCTTGTCCGGTTCCAATTTTGTTCCATCTCTTTGCCTGTAGCATATTT ATGGTGGTTTTTATGGAAATACAGGCAAATAGGTAAGACTGAGATGCGCATGCTGAAAAT CTTATTTGACTGAAGTGGTTCAACCATTCATCTTATTTGTTAGAATTTGATTTTGTCTTC ATTATCATAGATGATGAAAAGTT



consensusID : consensus_2535#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1532
fasta sequence
                              [GATTTCATGCTGAATTTACTTTTGAAGTATGCATACACACAAAACCACTTCACGGCTTGACTTCATCTTTCCCTTGTCAGCAAAAATTGTTTGAGACATGTCATGTTCTTTTTACTCTTTTGTACTTTAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGGAGATGGCACGCAAATCTGTAAGTTTTCAATAGATCTAATTGGCTAATCTATTCTGCTCCATTCTTCGAGAAATATCAGGCTTATGGATCTTCTATAAAGAACCTTGTTTTCTGGATTTTTTTTAATACAAAAATATGTATCCGTCAACTTCAGTTATACAACAATTGTATAATCTTACCATTGCATCCTTTATGTGACAGGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGTATGTTCACAACTTAATATTTAAGCATTTGTCTGACCACTGATTTTTTTTTTCACAGATAGTGATATGCATGTTAATGAGCTAATCCTGAGGATATTCCCAATTCTTAAGCTTGACTTGAACTAATTTTGAGCCTGACAGTACATCCAATCTCTTTGCAGCCACTGAATTCAAACAAAGCGCAACAGCACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGGTGCTGCTATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTTTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATCTACTGTCCCCATATATATGTTCTGATATGAG]

[+] EMBL AK070353             [GATTTCATGCTGAATTTACTTTTGAAGTATGCATACACACAAAACCACTTCACGGCTTGACTTCATCTTTCCCTTGTCAGCAAAAATTGTTTGAGACATGTCATGTTCTTTTTACTCTTTTGTACTTTAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGGAGATGGCACGCAAATCTGTAAGTTTTCAATAGATCTAATTGGCTAATCTATTCTGCTCCATTCTTCGAGAAATATCAGGCTTATGGATCTTCTATAAAGAACCTTGTTTTCTGGATTTTTTTTAATACAAAAATATGTATCCGTCAACTTCAGTTATACAACAATTGTATAATCTTACCATTGCATCCTTTATGTGACAGGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGTATGTTCACAACTTAATATTTAAGCATTTGTCTGACCACTGATTTTTTTTTTCACAGATAGTGATATGCATGTTAATGAGCTAATCCTGAGGATATTCCCAATTCTTAAGCTTGACTTGAACTAATTTTGAGCCTGACAGTACATCCAATCTCTTTGCAGCCACTGAATTCAAACAAAGCGCAACAGCACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGGTGCTGCTATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTTTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATCTACTGTCCCCATATATATGTTCTGATATGAG]


>consensus_2535#1 GATTTCATGCTGAATTTACTTTTGAAGTATGCATACACACAAAACCACTTCACGGCTTGA CTTCATCTTTCCCTTGTCAGCAAAAATTGTTTGAGACATGTCATGTTCTTTTTACTCTTT TGTACTTTAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAAC CTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCA AATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTT CACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATG CACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTA GGGAGATGGCACGCAAATCTGTAAGTTTTCAATAGATCTAATTGGCTAATCTATTCTGCT CCATTCTTCGAGAAATATCAGGCTTATGGATCTTCTATAAAGAACCTTGTTTTCTGGATT TTTTTTAATACAAAAATATGTATCCGTCAACTTCAGTTATACAACAATTGTATAATCTTA CCATTGCATCCTTTATGTGACAGGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTG CACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGT CAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGTATGTTC ACAACTTAATATTTAAGCATTTGTCTGACCACTGATTTTTTTTTTCACAGATAGTGATAT GCATGTTAATGAGCTAATCCTGAGGATATTCCCAATTCTTAAGCTTGACTTGAACTAATT TTGAGCCTGACAGTACATCCAATCTCTTTGCAGCCACTGAATTCAAACAAAGCGCAACAG CACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGA CCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGGTGCTGC TATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTT CCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTT TTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGA TTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCT TATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTT GCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTC TGAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGAT CTACTGTCCCCATATATATGTTCTGATATGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2535#0      CCTCCTCTCCCTCTCTCTTTTTTAGTTCGCCGCCGAACTCTCCAAAACCCCCACGAAAAC 60
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      CCTCGCTTCCCACCGACTCCATGTGGCGCCTCCGGTCGCGGACGGCGGCGGCGGCGGCCG 120
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      TCATTGCCGCGTCCGCGGCGTCGCTCGCCGACGTCGCCTACGCGGACAGCGGCTACTCCT 180
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      TCTTCCGCCGCAGCTCCCCCCCGCCTCCACCTCCCGCCGCCGCCGCCGCCGCCGCTGCTT 240
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      CGGAGGACTCTGGCACGGAGGTGGCCGTCGAGGTGGATTCCAGCGGGTTCGACCCCGAGA 300
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      GCCTGGAGCGGGCGGCCAGGTTGCTGCGGAAGCTCAACTCGTCGAAATACGCGAAGCAGC 360
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      TGTTTGAGCTGATGCGCATGCAGGAGAAGACCCGGCTTGCGGAGCTGGAGGCCGAGAAGG 420
consensus_2535#1      ----------GAT-TTCATGCTGAA------TTTACTTTTGAAGTATGCATACACACAAA 43
                                ***   ***** * *          ***  * **   *    *    *  

consensus_2535#0      TTCAGTACATCATCCAACAACACCTCAGGGACATTGAGAGGCAACAGAAAGAAGGTGAAA 480
consensus_2535#1      ACCACTTCACGGCTTGACTTCATCTT-------TCCCTTGTCAGCAAAAATTGTTTGAGA 96
                        ** * **       **  ** **        *     * ** ** ***     *** *

consensus_2535#0      AAT-TCAGAGAGAGTTTGCAGCAGCAAGCTCAAGCAGAGGCACAAAAGTTACGTTATGAC 539
consensus_2535#1      CATGTCATGTTCTTTTTACTCTTTTGTACTTTAGGGAAGGAGCAAAAGTTAC---ATGGG 153
                       ** ***       *** *         **  **   ***  **********   ***  

consensus_2535#0      GATGAATTAGCTAGGAAAAGAATGCAGACGGAGCGTGAAGCACAAAGGCGACAGGATGCA 599
consensus_2535#1      GTTACATTAAT-------AGAATCTTGGGTCAACCTT---CACTGATCCG------TGAA 197
                      * *  ****         *****   *    * * *    ***  *  **      ** *

consensus_2535#0      GAACTTGTGAAGATGCAAGAGGCAGCTGCCCTTAGGAAAGAAGAAGTTAGGCGTACCACA 659
consensus_2535#1      TCATCT------ATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCA 251
                        *  *      **** * **    *       ***    * *   * *    ***  **

consensus_2535#0      GAAAAGAAGATTTTAGAAAAAATGCTAGAGGATGAGAAAGAAAAGGCTCTCTTAAAGAAA 719
consensus_2535#1      GCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCA---TCCTTCACTGAAA 308
                      * *     *     **    *    * *** ***  *      *   **  * *  ****

consensus_2535#0      CAAAATATCCAAGCTAACGCTGAAGCAAAAGGTGAAGCCCTTACTCGTGAAGCAAAGGCT 779
consensus_2535#1      CGGAGGATTGAACATCTTGCACGAGCTACAGC--AAATACAAAGTCGCACGATGCACCAT 366
                      *  *  **  **  *   **   *** * **   **   *  * ***        *   *

consensus_2535#0      TTAGAAGACTACAACAGAAAGATGCTCCTGGAACGTATAAATGGCGACAAAGAGAAGTGG 839
consensus_2535#1      TTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTA-GTTGCTAGGGAG 425
                      ** * *   * *      * * * * ********    ***     *    *  * *  *

consensus_2535#0      ATTGCTGCAATAAATACTACTTTTTCACACATTGAA--GGTGGGTTTAGGATGCTGTTGA 897
consensus_2535#1      ATGGCACGCAAATCTGTAAGTTTTCAATAGATCTAATTGGCTAATCTATTCTGCTCCATT 485
                      ** **    * *  *   * ****  * * **  **  **    * **   ****     

consensus_2535#0      CTGACAGGAGTAAATTATTGATGGGTGTTGGAGGAGTTACTGCGCTCGCTGCTGGAATTT 957
consensus_2535#1      CTTCGAGAAATATCAGGCTTATGGATCTTCTATAAAGAAC----CTTGTTTTCTGGATTT 541
                      **   ** * **      * **** * **  *  *   **    ** * *    * ****

consensus_2535#0      ATACTACCAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAAC 1017
consensus_2535#1      TTTTTAATA---------CAAAAAT-----------------ATGTATCC----GTCAAC 571
                       *  **  *         ***** *                 **  *  *    ******

consensus_2535#0      CTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCA 1077
consensus_2535#1      -TTCAGTTATACAACAATTGTATAATCTTACCATTGCATCCTTTATGTGACAGGGCTTGG 630
                       **** * ** *   ***  * **  *  *   ** **   *  * **   ***   *  

consensus_2535#0      AATCTACTTCAGCATCTCTGTCAGGAGGTGCAG-GCTTTGAGAATGTTATTCTTCATCCT 1136
consensus_2535#1      ATTATGCCATGATGAC---GGGAGGAGATGTTGCACCCTTAGGATCAGA------AGCTG 681
                      * * * *        *   *  ***** **  *  *  * ** **   *      * *  

consensus_2535#0      TCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGAT 1196
consensus_2535#1      TTACCAAAATACA----TCAAATTTTTGACTGGGCTA-AGAAGTCAAGGAAGGGCATGCT 736
                      * **  ***   *    * **  * ***   * **** ** *   *   *   *** * *

consensus_2535#0      GCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCT 1256
consensus_2535#1      GCTTTTCATTG-ATGAGGCTGATGCGTTCTTGTGCGAGTATGTTCACAAC-TTAATATTT 794
                      **      * * *  * **** *   *  *    *  * *     * *** *** *   *

consensus_2535#0      AGGGAGATGGCACGCAAATCTGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCA 1316
consensus_2535#1      AAGCATTTGTCTGACCA--CTGATTTTTTTTTTCACA-GATAGTGATATGC-ATGTTAAT 850
                      * * *  ** *   * *  ***  **   ** *  ** ***   *  * *  *****   

consensus_2535#0      CCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCA 1376
consensus_2535#1      GAGCTAAT-CCTGAGGATATTCCCAA----TTCTTAAGCTTGACTTGAACTAATT--TTG 903
                          **    * ** * * ** ****         **  **    **  ****    *  

consensus_2535#0      AGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGCGCAACAGC 1436
consensus_2535#1      AGCCTGACAGTACATCCAATC-TCTTTGCAGCCACTGAATTCAAACA-AAGCGCAACAGC 961
                      **   *    * *  *   ** *   **  **   **  ***       ***********

consensus_2535#0      ACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGAC 1496
consensus_2535#1      ACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGAC 1021
                      ************************************************************

consensus_2535#0      CAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGATGCTGCT 1556
consensus_2535#1      CAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGGTGCTGCT 1081
                      **************************************************** *******

consensus_2535#0      ATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTC 1616
consensus_2535#1      ATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTC 1141
                      ************************************************************

consensus_2535#0      CAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTT 1676
consensus_2535#1      CAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGAAAAAACTCGTTT 1201
                      ************************************************************

consensus_2535#0      TGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGAT 1736
consensus_2535#1      TGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGAT 1261
                      ************************************************************

consensus_2535#0      TTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTT 1796
consensus_2535#1      TTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTT 1321
                      ************************************************************

consensus_2535#0      ATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTG 1856
consensus_2535#1      ATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTG 1381
                      ************************************************************

consensus_2535#0      CTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCT 1916
consensus_2535#1      CTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCT 1441
                      ************************************************************

consensus_2535#0      GAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATC 1976
consensus_2535#1      GAGACTTCAACTTGAGCAATGTTATAGATTTTATCAGAAAGCAGCAGTCCTTTTCAGATC 1501
                      ************************************************************

consensus_2535#0      TACTGTCCCCATATATATGTTCTGATATGAGGAATGGAGTGAGATATAGTCAGTTTCCTC 2036
consensus_2535#1      TACTGTCCCCATATATATGTTCTGATATGAG----------------------------- 1532
                      *******************************                             

consensus_2535#0      CAGCTGACTTCGATAGAAGTTGAAATTTAGAACACACCGGATACTGATGTTCTTCTTTGC 2096
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      GGGGGGTATGACCTAGGCTTGTCCGGTTCCAATTTTGTTCCATCTCTTTGCCTGTAGCAT 2156
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      ATTTATGGTGGTTTTTATGGAAATACAGGCAAATAGGTAAGACTGAGATGCGCATGCTGA 2216
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      AAATCTTATTTGACTGAAGTGGTTCAACCATTCATCTTATTTGTTAGAATTTGATTTTGT 2276
consensus_2535#1      ------------------------------------------------------------
                                                                                  

consensus_2535#0      CTTCATTATCATAGATGATGAAAAGTT 2303
consensus_2535#1      ---------------------------
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)