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Oryza sativa
cluster # 2550 cluster # 2550       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2550#0 length = 1927 sequences # 2  

consensusID : consensus_2550#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1927
fasta sequence
                              [GCGTCGGGGGCGAGGACGAGGACGCCGCTAGGGAGGGGTTCGCCGATCGGATCAGGAGGATGATATCGGAGCGCCCGCCCGACGATTTCCCGATGCCGCCTCCTCCTCCTCCGCCGTTGCCGCCGATGCAGCACGTCCCGCCGCGACAGCGGAGAACGCCCCGGAGGAGACTGAGGGAGGACGGAGGAGGAGGCGGTGGCGGAAGCAGCGGGGATTCCTCGGGAGGGGAGGGTACGAGCGCTGCACCGAAGAGGGAGTGGTGGGGAGGGGCCACCCTGGGAGAAGAGCTTCCCACGCCGCGGGAGATGTGCCGGAGGCTCGACGAGTTCGTCATCGGGCAGGGGAAAGCTAAAAAGGTCTTGTCGGTAGCTGTATACAATCACTACAAGAGAATATATAACGCGACTGTACAGAAAGGGTGTTCCACCAATTCTGGGTGGCTAGACGCTGCAAGTGATGATCAAAATAACATAGAAATAGATAAAAGCAATGTGCTTCTAATGGGTCCAACTGGCTCAGGAAAAACATTACTCGCCAAAACACTAGCACGCATTGTAAATGTACCATTCATTATAGCTGACGCAACATCATTAACACAGGCTGGATATGTAGGTGAAGATGTAGAGTCGATACTGCAGAAGTTACTAGTGGCTGCTGAATATAATGTTCAAGCTGCCCAACAAGGGATAGTGTACATAGACGAAGTAGATAAGATAACAAAGAAGGCAGAGAGTGCAAATGTTAGCAGAGATGTATCTGGGGAAGGTGTTCAACAAGCACTGTTAAAAATCCTAGAAGGAACTGTTGTTAGCATTCCTGAGAAGGGATCTCGCAAGAATTCCCGCAATGAGAGCATACAGATAGACACAAAAGATATTCTTTTCATATGTGGTGGCGCTTTTGTCGACTTGGAGAAGACTATTTCTGAAAGGCGCCAAGATTCATCTATAGGTTTTGGGGCACCCATTCGGATAAACATGAGAAGTTCTGAAGTGACTGATCCAATGGTCACTTCATCATTGTTGGAATCTGTTGAGAGTGGCGATCTTGCAAGATATGGTTTGATACCAGAGTTTATTGGACGCTTGCCCATCCTAGTTAGTTTGACAGCTCTCAATGAAGATCAGCTTGTTCAGGTTCTTACAGAACCAAAGAATTCTCTTTCCAGACAATACAGGAAAATGTTTAGCCTGAACAAAGTTAAGTTACACTTTACTGATGGTGCACTTAGAATAGTAGCCAAGAAGGCTATAGCCAGAAATACTGGTGCACGTGGTCTGAGAGCCATCTTGGAAAGCCTTCTATTGGAGGCCATGTATGAGATCCCAGACGAGAAAACAGGAAGCGAACGAGTAGACGCTGTTGTGGTGGATGAGGAGGCAATAGGTTCAATTGATAGGCCAGGATGTGGAGCCAAAATTCTTCGGGGTGACGGTGCATTGGAGCAGTACATAACAAACACTAACATGAAGAATTCCATGGAAGCTAACGAGGGTTTGGCGGGTGAACTTGAAGATGCATATATGATGTCAAGATTTGTTAGCTTGTAATTAATTTGACCAACTTCATTCAACATGTAACATGGTCTCCCCCTCACTCACATCACAGCCGCTTGTTCTCTTACCATTTTTTTCTGTAATTTATTTTTGCTTGTTTTCTGACAAGCAAGTCTATAGCTCAATTTGTTGTAATTCATGTAAACAGGAGTTGCTTTTCATTGAGCAACCCTCCTGCAAAGTAAATTTGCCCCTTCTTTTTTTCTGAAGCCACCAACTGGGCAGTTTAGTTATTGGCAAAAGTATAAAGAATCCTACATACCATTGTTTCCTAGTACATGATATGGTGCCATTTTCCTGACATGATAAGCCATCAACTGGGACAGCAAGTTTCAAGTATTATATGTGAAATAATGTAATGATGAATGATT]

[+] EMBL AK070098             [GCGTCGGGGGCGAGGACGAGGACGCCGCTAGGGAGGGGTTCGCCGATCGGATCAGGAGGATGATATCGGAGCGCCCGCCCGACGATTTCCCGATGCCGCCTCCTCCTCCTCCGCCGTTGCCGCCGATGCAGCACGTCCCGCCGCGACAGCGGAGAACGCCCCGGAGGAGACTGAGGGAGGACGGAGGAGGAGGCGGTGGCGGAAGCAGCGGGGATTCCTCGGGAGGGGAGGGTACGAGCGCTGCACCGAAGAGGGAGTGGTGGGGAGGGGCCACCCTGGGAGAAGAGCTTCCCACGCCGCGGGAGATGTGCCGGAGGCTCGACGAGTTCGTCATCGGGCAGGGGAAAGCTAAAAAGGTCTTGTCGGTAGCTGTATACAATCACTACAAGAGAATATATAACGCGACTGTACAGAAAGGGTGTTCCACCAATTCTGGGTGGCTAGACGCTGCAAGTGATGATCAAAATAACATAGAAATAGATAAAAGCAATGTGCTTCTAATGGGTCCAACTGGCTCAGGAAAAACATTACTCGCCAAAACACTAGCACGCATTGTAAATGTACCATTCATTATAGCTGACGCAACATCATTAACACAGGCTGGATATGTAGGTGAAGATGTAGAGTCGATACTGCAGAAGTTACTAGTGGCTGCTGAATATAATGTTCAAGCTGCCCAACAAGGGATAGTGTACATAGACGAAGTAGATAAGATAACAAAGAAGGCAGAGAGTGCAAATGTTAGCAGAGATGTATCTGGGGAAGGTGTTCAACAAGCACTGTTAAAAATCCTAGAAGGAACTGTTGTTAGCATTCCTGAGAAGGGATCTCGCAAGAATTCCCGCAATGAGAGCATACAGATAGACACAAAAGATATTCTTTTCATATGTGGTGGCGCTTTTGTCGACTTGGAGAAGACTATTTCTGAAAGGCGCCAAGATTCATCTATAGGTTTTGGGGCACCCATTCGGATAAACATGAGAAGTTCTGAAGTGACTGATCCAATGGTCACTTCATCATTGTTGGAATCTGTTGAGAGTGGCGATCTTGCAAGATATGGTTTGATACCAGAGTTTATTGGACGCTTGCCCATCCTAGTTAGTTTGACAGCTCTCAATGAAGATCAGCTTGTTCAGGTTCTTACAGAACCAAAGAATTCTCTTTCCAGACAATACAGGAAAATGTTTAGCCTGAACAAAGTTAAGTTACACTTTACTGATGGTGCACTTAGAATAGTAGCCAAGAAGGCTATAGCCAGAAATACTGGTGCACGTGGTCTGAGAGCCATCTTGGAAAGCCTTCTATTGGAGGCCATGTATGAGATCCCAGACGAGAAAACAGGAAGCGAACGAGTAGACGCTGTTGTGGTGGATGAGGAGGCAATAGGTTCAATTGATAGGCCAGGATGTGGAGCCAAAATTCTTCGGGGTGACGGTGCATTGGAGCAGTACATAACAAACACTAACATGAAGAATTCCATGGAAGCTAACGAGGGTTTGGCGGGTGAACTTGAAGATGCATATATGATGTCAAGATTTGTTAGCTTGTAATTAATTTGACCAACTTCATTCAACATGTAACATGGTCTCCCCCTCACTCACATCACAGCCGCTTGTTCTCTTACCATTTTTTTCTGTAATTTATTTTTGCTTGTTTTCTGACAAGCAAGTCTATAGCTCAATTTGTTGTAATTCATGTAAACAGGAGTTGCTTTTCATTGAGCAACCCTCCTGCAAAGTAAATTTGCCCCTTCTTTTTTTCTGAAGCCACCAACTGGGCAGTTTAGTTATTGGCAAAAGTATAAAGAATCCTACATACCATTGTTTCCTAGTACATGATATGGTGCCATTTTCCTGACATGATAAGCCATCAACTGGGACAGCAAGTTTCAAGTATTATATGTGAAATAATGTAATGATGAATGATT]
[-] EMBL CA762918             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACAGCTCTCAATGAAGATCAGCCTGTTCAGGTTCTTACAGAACCAAAGAATTCTCTTTCCAGACAATACAGGAAAATGTTTAGCCTGAACAAAGTTAAGTTACACTTTACTGATGGTGCACTTAGAATAGTAGCCAAGAAGGCTATAGCCAGAAATACTGGTGCACGTGGTCTGAGAGCCATCTTGGAAAGCCTTCTATTGGAGGCCATGTATGAGATCCCAGACGAGAAAACAGGAAGCGAACGAGTAGACGCTGTTGTGGTGGATGAGGAGGCAATAGGTTCAATTGATAGGCCAGGATGTGGAGCCAAAATTTTTCGGGGTGACGGTGCATTGGAGCAGTACATAACAAACACTAACATGAAGAATTCCATGGAAGCTAACGAGGGTTTGGCGGGTGAACTTGAAGATGCATATATGATGTCAAGATTTGTTAGCTTGTAATTAATTTGACCAACTTCATTCAACATGTAACATGGTCTCCCCCTCACTCACATTACAGCCGCTTGTTCTCTTACCATTTTTTTCTGTAATTTATTTTTGCTTGTTTTCTGACAAGCAAGTCTATAGCTCAATTTGTTGTAATTCATGTAAACAGGAGTTGCTTTTCATTGAGCAACCCTCCTGCAAAGTAAATTTGCCCCTTCTTTTTTTTTGAAaaaaaa                                                                                                                                                            ]


>consensus_2550#0 GCGTCGGGGGCGAGGACGAGGACGCCGCTAGGGAGGGGTTCGCCGATCGGATCAGGAGGA TGATATCGGAGCGCCCGCCCGACGATTTCCCGATGCCGCCTCCTCCTCCTCCGCCGTTGC CGCCGATGCAGCACGTCCCGCCGCGACAGCGGAGAACGCCCCGGAGGAGACTGAGGGAGG ACGGAGGAGGAGGCGGTGGCGGAAGCAGCGGGGATTCCTCGGGAGGGGAGGGTACGAGCG CTGCACCGAAGAGGGAGTGGTGGGGAGGGGCCACCCTGGGAGAAGAGCTTCCCACGCCGC GGGAGATGTGCCGGAGGCTCGACGAGTTCGTCATCGGGCAGGGGAAAGCTAAAAAGGTCT TGTCGGTAGCTGTATACAATCACTACAAGAGAATATATAACGCGACTGTACAGAAAGGGT GTTCCACCAATTCTGGGTGGCTAGACGCTGCAAGTGATGATCAAAATAACATAGAAATAG ATAAAAGCAATGTGCTTCTAATGGGTCCAACTGGCTCAGGAAAAACATTACTCGCCAAAA CACTAGCACGCATTGTAAATGTACCATTCATTATAGCTGACGCAACATCATTAACACAGG CTGGATATGTAGGTGAAGATGTAGAGTCGATACTGCAGAAGTTACTAGTGGCTGCTGAAT ATAATGTTCAAGCTGCCCAACAAGGGATAGTGTACATAGACGAAGTAGATAAGATAACAA AGAAGGCAGAGAGTGCAAATGTTAGCAGAGATGTATCTGGGGAAGGTGTTCAACAAGCAC TGTTAAAAATCCTAGAAGGAACTGTTGTTAGCATTCCTGAGAAGGGATCTCGCAAGAATT CCCGCAATGAGAGCATACAGATAGACACAAAAGATATTCTTTTCATATGTGGTGGCGCTT TTGTCGACTTGGAGAAGACTATTTCTGAAAGGCGCCAAGATTCATCTATAGGTTTTGGGG CACCCATTCGGATAAACATGAGAAGTTCTGAAGTGACTGATCCAATGGTCACTTCATCAT TGTTGGAATCTGTTGAGAGTGGCGATCTTGCAAGATATGGTTTGATACCAGAGTTTATTG GACGCTTGCCCATCCTAGTTAGTTTGACAGCTCTCAATGAAGATCAGCTTGTTCAGGTTC TTACAGAACCAAAGAATTCTCTTTCCAGACAATACAGGAAAATGTTTAGCCTGAACAAAG TTAAGTTACACTTTACTGATGGTGCACTTAGAATAGTAGCCAAGAAGGCTATAGCCAGAA ATACTGGTGCACGTGGTCTGAGAGCCATCTTGGAAAGCCTTCTATTGGAGGCCATGTATG AGATCCCAGACGAGAAAACAGGAAGCGAACGAGTAGACGCTGTTGTGGTGGATGAGGAGG CAATAGGTTCAATTGATAGGCCAGGATGTGGAGCCAAAATTCTTCGGGGTGACGGTGCAT TGGAGCAGTACATAACAAACACTAACATGAAGAATTCCATGGAAGCTAACGAGGGTTTGG CGGGTGAACTTGAAGATGCATATATGATGTCAAGATTTGTTAGCTTGTAATTAATTTGAC CAACTTCATTCAACATGTAACATGGTCTCCCCCTCACTCACATCACAGCCGCTTGTTCTC TTACCATTTTTTTCTGTAATTTATTTTTGCTTGTTTTCTGACAAGCAAGTCTATAGCTCA ATTTGTTGTAATTCATGTAAACAGGAGTTGCTTTTCATTGAGCAACCCTCCTGCAAAGTA AATTTGCCCCTTCTTTTTTTCTGAAGCCACCAACTGGGCAGTTTAGTTATTGGCAAAAGT ATAAAGAATCCTACATACCATTGTTTCCTAGTACATGATATGGTGCCATTTTCCTGACAT GATAAGCCATCAACTGGGACAGCAAGTTTCAAGTATTATATGTGAAATAATGTAATGATG AATGATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)