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Oryza sativa
cluster # 2554 cluster # 2554       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2554#0 length = 3055 sequences # 1  
 consensus_2554#1 length = 667 sequences # 1  
consensusID : consensus_2554#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3055
fasta sequence 
                              [ATCTTAAATACTGTCAAGAACGACATTCCATCACAGTCTAAACCGAATCCAGAACAGTACTAATCCTAGGCTAGGCAAACTGCCGGAGGGCGCAGAGAGACACGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTCAGCTTGCTCTCAGGAGCGGCAGCATGAGCGTTGACAAGGACCTTCGCACACTCCCTGCAATCAATCAATTCATCCCAACAATCAGAACTAATGTTAGTTTACAGATCATTGAAAAGTTCAGAAACTTCAGGTTCAGGAAAAACGGAAGTTCAGAAAGTTCAGGTTTCAGGGAAAATGGAAATTCAGAAAGTTGAAAAAATACCTGAGCTGTGATTCGGTGAAACCGGTGTGGTGCTTGAGCGTGCTCGTCCAGAGGGGACTCCTCTTCAGCGTACATTGAGCCGCGTACACCGCCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCGTACTCCTTCAGCGCCATCTCAGAGAAGAAGAACACCATGTTCTCCAGCTGAAAAAAGACACAATGTCTCTGATCAGAATACAGTTACAATTTCCATGGCACACCAGAAATGAAATCAAGTTCTTTGTTCCTTCTTCTTGTTTTTTTTACCTCCTTGTCGCCTCCGGCGGCCTTGATGAACCGGAGCAAGAAGACGTAAGGTGTGGGAACGGTGATGTTCCACTGCAGCCTGTTCAAGATGTTCTTCTCCATGGCGAGGATATGCTGCCGCGAGTAGGCGTTGTCACAGACGTGGATGAGGTCCTGAACCTGAAAAAATCCGTTCACCGCAGCGAAGCAGAGTTTTGTTCAGTTACATCACAAGTGTGAAGCAGAGATTGGGATTCTTGTTCGTCTTGTTGAATCAATCGAATCTGCGTTACCTCCGGCGCCCACATCTCCTCGTACTTGGAGGCGATGAGCATGGCCGCGACGCCGACGAGCTGCAGCTCCCTGCGCAGCACGGGCTGCAGCGAGAGGTACCGGTCGATGACGTACATGGTGAGGTAGAGGGTCTCCGGCATCAGCTCGAATTTGTAGTGCACATCGATGATCCAGTCTGCCAGGATGGCCCTCATCTTGGGGTTCACCTCGACCTGGCTGCTCATGTAGTCTGTCGGCCGGCGCTCCAGCTGTGCAAGAACAACACTGTCAGTTTCTGAACAAATCTGAAGAGGAAAGCTTCACTGAAACGAAGATGGAAGAATCTGAGGTTTACCTGGGCTGTCCTGTAGAAGTTGTAGATGTCCTCGATGTACTCCACCACGGCGAGCTGGTTGTCGCCGTCGAGCTTGTCGATGTCCTCGACGACTTCTTTTGGCTTCTCAGTAATGCCACACGCGTGCTGCCATTAACAACATCGAATTCAGATTCAGCTACAGTGCAATTATGCAGAAATAAGCAGGCAAGCACAGGTGTTCGATCGATCACTCACCTTGGAACGAGCAGTAAGCACAGATGTAAGCGTGTTCACGACCTTCTTCCTGGAGTACTTGAGGGCTGAACCGCCGCTGCTGCTGCCGGCGCCCTCCGACTCCGACGGCTTCTTGTTCTCGTTGACGCCGGCGCCGGTGCTGGCCTTGGCGGCGTTCTCCGGACGGGGTACGACCTTCTTTGCCGGCTTCGGAGCTGGCTCCTTCCTGGCCGGATTCTGCACGACAATCTGCGACCAAAATCAAAAATCAGGGATCAAATCAACCGCTCTGAATTCGCAAGAAGAACACGAGAAACAGAAGGGGGGTGTGTCTCACTCCGTACCTTGTTCGCCGCAACGGCGTTCTCCTGAGCTTTCTTTAGAAGCTGGGCGCCGAAGCTCCTGGTGATTGGGCGATTGATCCCCTCCGGCAGCTGGATCTTGCTGTTGCAAGAAGAACACGAGGTTTTCAGAGAAGGAAACGAGAGGAAGAACGAATCGGGGAAGGTTGGCGACGATGATGTCGTGCTGCTCCTTACCCGTCGACCACATGGGCGTTCAGGACGTTGCCGATATCGCCGAGGGCTTGCCGGTTTCTCGCACCAGGTCGGCCGGCGGCGGCGGTGGCGGCGGCCTTCTGCTTCCCCGCTGCGACTGCAGCACCTGCCCATTCGCCGGAGAAGAAGATTAGCAACAGGGGTTGCGTTTACACGGGGATAAATCGAAACAAGCAGATCAAGAAAACCTAATCAAACACAGGAAGGGCAGCATCAAAAATCCGTTCTTGGTGCATGAATCGGGCAAGAAAGGATGGAAACTGGAATCAGTTGGCCCTCGCAACATAAATCCGTTCTTGAAAAAGGATTCGAACAGACCTGGAACTCTCACCAAGCAAGACTCGACTACCAAGAACTCAAAATTTTCCGCTTGAATCGTACAGATTCGGAACATCAAACAGAAAAATCCGTAGCTTGGAACCCCAAAGAACCCCAAGTTCAGGCAAGTCCCCCCAAAGAACCCAAATCAAGAACACAGAACAAAGCCACCGCCGCTCACCTCTGTTCGCCGGCTGCGGAGCGGCAGCCGCGCGCTGGTGCCTCGTCGCCATGCGTACGGCCTCCTGTTGCTCCTCCTCCTCCTCCTCCGGGCTCCAAGAACGCCAAGAACTCCGGCGAACTCCCTCCCGGACCGAAGCAGGCGGCCGTCCTCTCCTCCTCCTCTTCTCTCTTCGCTCTTCCAACTCTCTCTCTAAAATTTCTTGTTCTTGCTTGATTTGCTTGGATCGGAGAGGAGAGACGCGGAGATGCGTTGGCGTGGGAGGAGCGGCGCGGTGGGGGGCTCGAGCTTTATCCGGAGCGGAGGGCGACGCCTCCAACGGTCGAGAGGATCGACGGCCGGGATGGCGCGGCGTGGATTCAACGGCTGGGATCGGACGCGGGCGGAGTGAACGGTTGAAACTAGCCGTTGGGGACTGGTATTACGGGCAAGTGTTCGGCGGCGGGGTCATCCATGGCAAGTACTGTAGTACTGTGTTTAAGCTTTGTTTGCTACTGAAAGACAGTGTTAGCCTGGTAGTAATTACTTAATTAGGAGCAGTACATATGTGTACCAGCTCTATCTCTGTGA]

[+] EMBL AK107486             [ATCTTAAATACTGTCAAGAACGACATTCCATCACAGTCTAAACCGAATCCAGAACAGTACTAATCCTAGGCTAGGCAAACTGCCGGAGGGCGCAGAGAGACACGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTCAGCTTGCTCTCAGGAGCGGCAGCATGAGCGTTGACAAGGACCTTCGCACACTCCCTGCAATCAATCAATTCATCCCAACAATCAGAACTAATGTTAGTTTACAGATCATTGAAAAGTTCAGAAACTTCAGGTTCAGGAAAAACGGAAGTTCAGAAAGTTCAGGTTTCAGGGAAAATGGAAATTCAGAAAGTTGAAAAAATACCTGAGCTGTGATTCGGTGAAACCGGTGTGGTGCTTGAGCGTGCTCGTCCAGAGGGGACTCCTCTTCAGCGTACATTGAGCCGCGTACACCGCCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCGTACTCCTTCAGCGCCATCTCAGAGAAGAAGAACACCATGTTCTCCAGCTGAAAAAAGACACAATGTCTCTGATCAGAATACAGTTACAATTTCCATGGCACACCAGAAATGAAATCAAGTTCTTTGTTCCTTCTTCTTGTTTTTTTTACCTCCTTGTCGCCTCCGGCGGCCTTGATGAACCGGAGCAAGAAGACGTAAGGTGTGGGAACGGTGATGTTCCACTGCAGCCTGTTCAAGATGTTCTTCTCCATGGCGAGGATATGCTGCCGCGAGTAGGCGTTGTCACAGACGTGGATGAGGTCCTGAACCTGAAAAAATCCGTTCACCGCAGCGAAGCAGAGTTTTGTTCAGTTACATCACAAGTGTGAAGCAGAGATTGGGATTCTTGTTCGTCTTGTTGAATCAATCGAATCTGCGTTACCTCCGGCGCCCACATCTCCTCGTACTTGGAGGCGATGAGCATGGCCGCGACGCCGACGAGCTGCAGCTCCCTGCGCAGCACGGGCTGCAGCGAGAGGTACCGGTCGATGACGTACATGGTGAGGTAGAGGGTCTCCGGCATCAGCTCGAATTTGTAGTGCACATCGATGATCCAGTCTGCCAGGATGGCCCTCATCTTGGGGTTCACCTCGACCTGGCTGCTCATGTAGTCTGTCGGCCGGCGCTCCAGCTGTGCAAGAACAACACTGTCAGTTTCTGAACAAATCTGAAGAGGAAAGCTTCACTGAAACGAAGATGGAAGAATCTGAGGTTTACCTGGGCTGTCCTGTAGAAGTTGTAGATGTCCTCGATGTACTCCACCACGGCGAGCTGGTTGTCGCCGTCGAGCTTGTCGATGTCCTCGACGACTTCTTTTGGCTTCTCAGTAATGCCACACGCGTGCTGCCATTAACAACATCGAATTCAGATTCAGCTACAGTGCAATTATGCAGAAATAAGCAGGCAAGCACAGGTGTTCGATCGATCACTCACCTTGGAACGAGCAGTAAGCACAGATGTAAGCGTGTTCACGACCTTCTTCCTGGAGTACTTGAGGGCTGAACCGCCGCTGCTGCTGCCGGCGCCCTCCGACTCCGACGGCTTCTTGTTCTCGTTGACGCCGGCGCCGGTGCTGGCCTTGGCGGCGTTCTCCGGACGGGGTACGACCTTCTTTGCCGGCTTCGGAGCTGGCTCCTTCCTGGCCGGATTCTGCACGACAATCTGCGACCAAAATCAAAAATCAGGGATCAAATCAACCGCTCTGAATTCGCAAGAAGAACACGAGAAACAGAAGGGGGGTGTGTCTCACTCCGTACCTTGTTCGCCGCAACGGCGTTCTCCTGAGCTTTCTTTAGAAGCTGGGCGCCGAAGCTCCTGGTGATTGGGCGATTGATCCCCTCCGGCAGCTGGATCTTGCTGTTGCAAGAAGAACACGAGGTTTTCAGAGAAGGAAACGAGAGGAAGAACGAATCGGGGAAGGTTGGCGACGATGATGTCGTGCTGCTCCTTACCCGTCGACCACATGGGCGTTCAGGACGTTGCCGATATCGCCGAGGGCTTGCCGGTTTCTCGCACCAGGTCGGCCGGCGGCGGCGGTGGCGGCGGCCTTCTGCTTCCCCGCTGCGACTGCAGCACCTGCCCATTCGCCGGAGAAGAAGATTAGCAACAGGGGTTGCGTTTACACGGGGATAAATCGAAACAAGCAGATCAAGAAAACCTAATCAAACACAGGAAGGGCAGCATCAAAAATCCGTTCTTGGTGCATGAATCGGGCAAGAAAGGATGGAAACTGGAATCAGTTGGCCCTCGCAACATAAATCCGTTCTTGAAAAAGGATTCGAACAGACCTGGAACTCTCACCAAGCAAGACTCGACTACCAAGAACTCAAAATTTTCCGCTTGAATCGTACAGATTCGGAACATCAAACAGAAAAATCCGTAGCTTGGAACCCCAAAGAACCCCAAGTTCAGGCAAGTCCCCCCAAAGAACCCAAATCAAGAACACAGAACAAAGCCACCGCCGCTCACCTCTGTTCGCCGGCTGCGGAGCGGCAGCCGCGCGCTGGTGCCTCGTCGCCATGCGTACGGCCTCCTGTTGCTCCTCCTCCTCCTCCTCCGGGCTCCAAGAACGCCAAGAACTCCGGCGAACTCCCTCCCGGACCGAAGCAGGCGGCCGTCCTCTCCTCCTCCTCTTCTCTCTTCGCTCTTCCAACTCTCTCTCTAAAATTTCTTGTTCTTGCTTGATTTGCTTGGATCGGAGAGGAGAGACGCGGAGATGCGTTGGCGTGGGAGGAGCGGCGCGGTGGGGGGCTCGAGCTTTATCCGGAGCGGAGGGCGACGCCTCCAACGGTCGAGAGGATCGACGGCCGGGATGGCGCGGCGTGGATTCAACGGCTGGGATCGGACGCGGGCGGAGTGAACGGTTGAAACTAGCCGTTGGGGACTGGTATTACGGGCAAGTGTTCGGCGGCGGGGTCATCCATGGCAAGTACTGTAGTACTGTGTTTAAGCTTTGTTTGCTACTGAAAGACAGTGTTAGCCTGGTAGTAATTACTTAATTAGGAGCAGTACATATGTGTACCAGCTCTATCTCTGTGA]




>consensus_2554#0
ATCTTAAATACTGTCAAGAACGACATTCCATCACAGTCTAAACCGAATCCAGAACAGTAC
TAATCCTAGGCTAGGCAAACTGCCGGAGGGCGCAGAGAGACACGCCCAAGCTGCTCGGAT
GCGTACTTCCTGTATGCCGTCTTCAGCTTGCTCTCAGGAGCGGCAGCATGAGCGTTGACA
AGGACCTTCGCACACTCCCTGCAATCAATCAATTCATCCCAACAATCAGAACTAATGTTA
GTTTACAGATCATTGAAAAGTTCAGAAACTTCAGGTTCAGGAAAAACGGAAGTTCAGAAA
GTTCAGGTTTCAGGGAAAATGGAAATTCAGAAAGTTGAAAAAATACCTGAGCTGTGATTC
GGTGAAACCGGTGTGGTGCTTGAGCGTGCTCGTCCAGAGGGGACTCCTCTTCAGCGTACA
TTGAGCCGCGTACACCGCCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCGTA
CTCCTTCAGCGCCATCTCAGAGAAGAAGAACACCATGTTCTCCAGCTGAAAAAAGACACA
ATGTCTCTGATCAGAATACAGTTACAATTTCCATGGCACACCAGAAATGAAATCAAGTTC
TTTGTTCCTTCTTCTTGTTTTTTTTACCTCCTTGTCGCCTCCGGCGGCCTTGATGAACCG
GAGCAAGAAGACGTAAGGTGTGGGAACGGTGATGTTCCACTGCAGCCTGTTCAAGATGTT
CTTCTCCATGGCGAGGATATGCTGCCGCGAGTAGGCGTTGTCACAGACGTGGATGAGGTC
CTGAACCTGAAAAAATCCGTTCACCGCAGCGAAGCAGAGTTTTGTTCAGTTACATCACAA
GTGTGAAGCAGAGATTGGGATTCTTGTTCGTCTTGTTGAATCAATCGAATCTGCGTTACC
TCCGGCGCCCACATCTCCTCGTACTTGGAGGCGATGAGCATGGCCGCGACGCCGACGAGC
TGCAGCTCCCTGCGCAGCACGGGCTGCAGCGAGAGGTACCGGTCGATGACGTACATGGTG
AGGTAGAGGGTCTCCGGCATCAGCTCGAATTTGTAGTGCACATCGATGATCCAGTCTGCC
AGGATGGCCCTCATCTTGGGGTTCACCTCGACCTGGCTGCTCATGTAGTCTGTCGGCCGG
CGCTCCAGCTGTGCAAGAACAACACTGTCAGTTTCTGAACAAATCTGAAGAGGAAAGCTT
CACTGAAACGAAGATGGAAGAATCTGAGGTTTACCTGGGCTGTCCTGTAGAAGTTGTAGA
TGTCCTCGATGTACTCCACCACGGCGAGCTGGTTGTCGCCGTCGAGCTTGTCGATGTCCT
CGACGACTTCTTTTGGCTTCTCAGTAATGCCACACGCGTGCTGCCATTAACAACATCGAA
TTCAGATTCAGCTACAGTGCAATTATGCAGAAATAAGCAGGCAAGCACAGGTGTTCGATC
GATCACTCACCTTGGAACGAGCAGTAAGCACAGATGTAAGCGTGTTCACGACCTTCTTCC
TGGAGTACTTGAGGGCTGAACCGCCGCTGCTGCTGCCGGCGCCCTCCGACTCCGACGGCT
TCTTGTTCTCGTTGACGCCGGCGCCGGTGCTGGCCTTGGCGGCGTTCTCCGGACGGGGTA
CGACCTTCTTTGCCGGCTTCGGAGCTGGCTCCTTCCTGGCCGGATTCTGCACGACAATCT
GCGACCAAAATCAAAAATCAGGGATCAAATCAACCGCTCTGAATTCGCAAGAAGAACACG
AGAAACAGAAGGGGGGTGTGTCTCACTCCGTACCTTGTTCGCCGCAACGGCGTTCTCCTG
AGCTTTCTTTAGAAGCTGGGCGCCGAAGCTCCTGGTGATTGGGCGATTGATCCCCTCCGG
CAGCTGGATCTTGCTGTTGCAAGAAGAACACGAGGTTTTCAGAGAAGGAAACGAGAGGAA
GAACGAATCGGGGAAGGTTGGCGACGATGATGTCGTGCTGCTCCTTACCCGTCGACCACA
TGGGCGTTCAGGACGTTGCCGATATCGCCGAGGGCTTGCCGGTTTCTCGCACCAGGTCGG
CCGGCGGCGGCGGTGGCGGCGGCCTTCTGCTTCCCCGCTGCGACTGCAGCACCTGCCCAT
TCGCCGGAGAAGAAGATTAGCAACAGGGGTTGCGTTTACACGGGGATAAATCGAAACAAG
CAGATCAAGAAAACCTAATCAAACACAGGAAGGGCAGCATCAAAAATCCGTTCTTGGTGC
ATGAATCGGGCAAGAAAGGATGGAAACTGGAATCAGTTGGCCCTCGCAACATAAATCCGT
TCTTGAAAAAGGATTCGAACAGACCTGGAACTCTCACCAAGCAAGACTCGACTACCAAGA
ACTCAAAATTTTCCGCTTGAATCGTACAGATTCGGAACATCAAACAGAAAAATCCGTAGC
TTGGAACCCCAAAGAACCCCAAGTTCAGGCAAGTCCCCCCAAAGAACCCAAATCAAGAAC
ACAGAACAAAGCCACCGCCGCTCACCTCTGTTCGCCGGCTGCGGAGCGGCAGCCGCGCGC
TGGTGCCTCGTCGCCATGCGTACGGCCTCCTGTTGCTCCTCCTCCTCCTCCTCCGGGCTC
CAAGAACGCCAAGAACTCCGGCGAACTCCCTCCCGGACCGAAGCAGGCGGCCGTCCTCTC
CTCCTCCTCTTCTCTCTTCGCTCTTCCAACTCTCTCTCTAAAATTTCTTGTTCTTGCTTG
ATTTGCTTGGATCGGAGAGGAGAGACGCGGAGATGCGTTGGCGTGGGAGGAGCGGCGCGG
TGGGGGGCTCGAGCTTTATCCGGAGCGGAGGGCGACGCCTCCAACGGTCGAGAGGATCGA
CGGCCGGGATGGCGCGGCGTGGATTCAACGGCTGGGATCGGACGCGGGCGGAGTGAACGG
TTGAAACTAGCCGTTGGGGACTGGTATTACGGGCAAGTGTTCGGCGGCGGGGTCATCCAT
GGCAAGTACTGTAGTACTGTGTTTAAGCTTTGTTTGCTACTGAAAGACAGTGTTAGCCTG
GTAGTAATTACTTAATTAGGAGCAGTACATATGTGTACCAGCTCTATCTCTGTGA

consensusID : consensus_2554#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence 
                              [TTTTTTTTTTTTTATGGAAAAAGAATACTTTTCATTCAATTCATACTTATGAAAAGAATTTATGAAGAGTAGTTACACCAAGGTGTATCACAGTACTGAATACATGAGTATACTCGAGAGTTCAGAGTAACCCCGCAAAAAACCCAACAACAATCGCTCTCAAGTTGTCTTGATCCAATTAGCTAAACCCACGAAAGAATCTTAAATACTGTCAAGAACGACATTCCATCACAGTCTAAACCGAATCCAGAACAGTACTAATCCTAGGCTAGGCAAACTGCCGGAGGGCGCAGAGAGACACGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTCAGCTTGCTCTCAGGAGCGGCAGCATGAGCGCTGACAAGGACCTTCGCACACTCCCTGAGCTGTGATTCGGTGAAACCGGTGGGGTGCTTGAGCGGGCTCGTCCAGAGGGGACTCCTCTTCAGCGTACATTGAGCCGCGTACACCGGCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCGTACTCCTTCAGCGCCATCTCAGAGAAGAGGACACCATGGTCTCCACCCCTTGTCTCGTCCTGCCCTTGTCTCGGCCTCTGGCCCTGAGCAAGGTTAGGGAGGCCGTGGACTGGAGGGGGGCCCCGGTCCCCATTCGCCC]

[+] EMBL CA762938             [TTTTTTTTTTTTTATGGAAAAAGAATACTTTTCATTCAATTCATACTTATGAAAAGAATTTATGAAGAGTAGTTACACCAAGGTGTATCACAGTACTGAATACATGAGTATACTCGAGAGTTCAGAGTAACCCCGCAAAAAACCCAACAACAATCGCTCTCAAGTTGTCTTGATCCAATTAGCTAAACCCACGAAAGAATCTTAAATACTGTCAAGAACGACATTCCATCACAGTCTAAACCGAATCCAGAACAGTACTAATCCTAGGCTAGGCAAACTGCCGGAGGGCGCAGAGAGACACGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTCAGCTTGCTCTCAGGAGCGGCAGCATGAGCGCTGACAAGGACCTTCGCACACTCCCTGAGCTGTGATTCGGTGAAACCGGTGGGGTGCTTGAGCGGGCTCGTCCAGAGGGGACTCCTCTTCAGCGTACATTGAGCCGCGTACACCGGCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCGTACTCCTTCAGCGCCATCTCAGAGAAGAGGACACCATGGTCTCCACCCCTTGTCTCGTCCTGCCCTTGTCTCGGCCTCTGGCCCTGAGCAAGGTTAGGGAGGCCGTGGACTGGAGGGGGGCCCCGGTCCCCATTCGCCC]




>consensus_2554#1
TTTTTTTTTTTTTATGGAAAAAGAATACTTTTCATTCAATTCATACTTATGAAAAGAATT
TATGAAGAGTAGTTACACCAAGGTGTATCACAGTACTGAATACATGAGTATACTCGAGAG
TTCAGAGTAACCCCGCAAAAAACCCAACAACAATCGCTCTCAAGTTGTCTTGATCCAATT
AGCTAAACCCACGAAAGAATCTTAAATACTGTCAAGAACGACATTCCATCACAGTCTAAA
CCGAATCCAGAACAGTACTAATCCTAGGCTAGGCAAACTGCCGGAGGGCGCAGAGAGACA
CGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTCAGCTTGCTCTCAGGAGCG
GCAGCATGAGCGCTGACAAGGACCTTCGCACACTCCCTGAGCTGTGATTCGGTGAAACCG
GTGGGGTGCTTGAGCGGGCTCGTCCAGAGGGGACTCCTCTTCAGCGTACATTGAGCCGCG
TACACCGGCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCGTACTCCTTCAGC
GCCATCTCAGAGAAGAGGACACCATGGTCTCCACCCCTTGTCTCGTCCTGCCCTTGTCTC
GGCCTCTGGCCCTGAGCAAGGTTAGGGAGGCCGTGGACTGGAGGGGGGCCCCGGTCCCCA
TTCGCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2554#0      ---------------------------------ATCTTAAATACTGTCAAGAACGACATT 27
consensus_2554#1      TTTTTTTTTTTTTATGGAAAAAGAATACTTTTCATTCAATTCATACTTATGAAAAGAATT 60
                                                       **   *   *   * * ***    ***

consensus_2554#0      CCATCACAGT--CTAAACCGAA-TCCAGAACAGTACTAATCCTAGGCTAGGCAAACTGCC 84
consensus_2554#1      TATGAAGAGTAGTTACACCAAGGTGTATCACAGTACTGAATACA---TGAGTA---TACT 114
                           * ***   ** *** *  *  *  ******** *    *   *  * *   * * 

consensus_2554#0      GGAGGGCGCAGAGAGACACGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTC 144
consensus_2554#1      CGAGAGTTCAGAGTAACCC-CGCAAAAAACCCAACAACA-ATCGCTCTCAAGTTGTCTTG 172
                       *** *  *****  ** * * ***    * *     *  *   *    * *  ***** 

consensus_2554#0      AGCTTGCTCTCAGGAGCGGCAGCATGAGCGTTGACAAGGACCTTCGC-ACACTCCCT-GC 202
consensus_2554#1      ATCCAATTAGCTAAACCCACGAAAGAATCTTAAATACTGTCAAGAACGACATTCCATCAC 232
                      * *    *  *   * *  *   *  * * *  * *  * *     * *** *** *  *

consensus_2554#0      AATCAATCAATTCATCCCAACAATCAGAACTAATGTTAGTTTA--CAGATCATTGAAAAG 260
consensus_2554#1      AGTCTA--AACCGAATCCAG--AACAGTACTAATCCTAGGCTAGGCAAACTGCCGGAGGG 288
                      * ** *  **   *  ***   * *** ******  ***  **  ** *     * *  *

consensus_2554#0      TTCAGAAAC-----TTCAGGTTCAGGAAAAACGGAAGTTCAGAAAG-----TTCAGGTT- 309
consensus_2554#1      CGCAGAGAGACACGCCCAAGCTGCTCGGATGCGTACTTCCTGTATGCCGTCTTCAGCTTG 348
                        **** *        ** * *      *  ** *  * * * * *     ***** ** 

consensus_2554#0      ---TCAGGG-----AAAATGGAAATTCAGAAAG---TTGAAAAAATACCTGAGCTGTGAT 358
consensus_2554#1      CTCTCAGGAGCGGCAGCATGAGCGCTGACAAGGACCTTCGCACACTCCCTGAGCTGTGAT 408
                         *****      *  ***     * * ** *   **   * * * *************

consensus_2554#0      TCGGTGAAACCGGTGTGGTGCTTGAGCGTGCTCGTCCAGAGGGGACTCCTCTTCAGCGTA 418
consensus_2554#1      TCGGTGAAACCGGTGGGGTGCTTGAGCGGGCTCGTCCAGAGGGGACTCCTCTTCAGCGTA 468
                      *************** ************ *******************************

consensus_2554#0      CATTGAGCCGCGTACACCGCCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCG 478
consensus_2554#1      CATTGAGCCGCGTACACCGGCGACGCGGCCACCAGCGACGGGCACAGCGACGCCATGCCG 528
                      ******************* ****************************************

consensus_2554#0      TACTCCTTCAGCGCCATCTCAGAGAAGAAGAACACCATGTTCTCCAGCTGAAAAAAGACA 538
consensus_2554#1      TACTCCTTCAGCGCCATCTCAGAGAAGAGGA-CACCATGGTCTCCACCCCTTGTCT--CG 585
                      **************************** ** ******* ****** *          * 

consensus_2554#0      CAATGTCTCTGA-TCAGAATACAGTTACAATTTCCAT--GGCACACCAGAAATGAAATCA 595
consensus_2554#1      TCCTGCCCTTGTCTCGGCCTCTGGCCCTGAGCAAGGTTAGGGAGGCCGTGGACTGGAGGG 645
                         ** *  **  ** *  *   *     *      *  ** *  **    *    *   

consensus_2554#0      AGTTCTTTGTTCCTTCTTCTTGTTTTTTTTACCTCCTTGTCGCCTCCGGCGGCCTTGATG 655
consensus_2554#1      GGGCCCCGGTCCCCATTCGCCC-------------------------------------- 667
                       *  *   ** **   *                                           

consensus_2554#0      AACCGGAGCAAGAAGACGTAAGGTGTGGGAACGGTGATGTTCCACTGCAGCCTGTTCAAG 715
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      ATGTTCTTCTCCATGGCGAGGATATGCTGCCGCGAGTAGGCGTTGTCACAGACGTGGATG 775
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      AGGTCCTGAACCTGAAAAAATCCGTTCACCGCAGCGAAGCAGAGTTTTGTTCAGTTACAT 835
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CACAAGTGTGAAGCAGAGATTGGGATTCTTGTTCGTCTTGTTGAATCAATCGAATCTGCG 895
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TTACCTCCGGCGCCCACATCTCCTCGTACTTGGAGGCGATGAGCATGGCCGCGACGCCGA 955
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CGAGCTGCAGCTCCCTGCGCAGCACGGGCTGCAGCGAGAGGTACCGGTCGATGACGTACA 1015
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TGGTGAGGTAGAGGGTCTCCGGCATCAGCTCGAATTTGTAGTGCACATCGATGATCCAGT 1075
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CTGCCAGGATGGCCCTCATCTTGGGGTTCACCTCGACCTGGCTGCTCATGTAGTCTGTCG 1135
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GCCGGCGCTCCAGCTGTGCAAGAACAACACTGTCAGTTTCTGAACAAATCTGAAGAGGAA 1195
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      AGCTTCACTGAAACGAAGATGGAAGAATCTGAGGTTTACCTGGGCTGTCCTGTAGAAGTT 1255
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GTAGATGTCCTCGATGTACTCCACCACGGCGAGCTGGTTGTCGCCGTCGAGCTTGTCGAT 1315
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GTCCTCGACGACTTCTTTTGGCTTCTCAGTAATGCCACACGCGTGCTGCCATTAACAACA 1375
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TCGAATTCAGATTCAGCTACAGTGCAATTATGCAGAAATAAGCAGGCAAGCACAGGTGTT 1435
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CGATCGATCACTCACCTTGGAACGAGCAGTAAGCACAGATGTAAGCGTGTTCACGACCTT 1495
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CTTCCTGGAGTACTTGAGGGCTGAACCGCCGCTGCTGCTGCCGGCGCCCTCCGACTCCGA 1555
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CGGCTTCTTGTTCTCGTTGACGCCGGCGCCGGTGCTGGCCTTGGCGGCGTTCTCCGGACG 1615
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GGGTACGACCTTCTTTGCCGGCTTCGGAGCTGGCTCCTTCCTGGCCGGATTCTGCACGAC 1675
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      AATCTGCGACCAAAATCAAAAATCAGGGATCAAATCAACCGCTCTGAATTCGCAAGAAGA 1735
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      ACACGAGAAACAGAAGGGGGGTGTGTCTCACTCCGTACCTTGTTCGCCGCAACGGCGTTC 1795
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TCCTGAGCTTTCTTTAGAAGCTGGGCGCCGAAGCTCCTGGTGATTGGGCGATTGATCCCC 1855
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TCCGGCAGCTGGATCTTGCTGTTGCAAGAAGAACACGAGGTTTTCAGAGAAGGAAACGAG 1915
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      AGGAAGAACGAATCGGGGAAGGTTGGCGACGATGATGTCGTGCTGCTCCTTACCCGTCGA 1975
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CCACATGGGCGTTCAGGACGTTGCCGATATCGCCGAGGGCTTGCCGGTTTCTCGCACCAG 2035
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GTCGGCCGGCGGCGGCGGTGGCGGCGGCCTTCTGCTTCCCCGCTGCGACTGCAGCACCTG 2095
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CCCATTCGCCGGAGAAGAAGATTAGCAACAGGGGTTGCGTTTACACGGGGATAAATCGAA 2155
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      ACAAGCAGATCAAGAAAACCTAATCAAACACAGGAAGGGCAGCATCAAAAATCCGTTCTT 2215
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GGTGCATGAATCGGGCAAGAAAGGATGGAAACTGGAATCAGTTGGCCCTCGCAACATAAA 2275
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TCCGTTCTTGAAAAAGGATTCGAACAGACCTGGAACTCTCACCAAGCAAGACTCGACTAC 2335
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CAAGAACTCAAAATTTTCCGCTTGAATCGTACAGATTCGGAACATCAAACAGAAAAATCC 2395
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GTAGCTTGGAACCCCAAAGAACCCCAAGTTCAGGCAAGTCCCCCCAAAGAACCCAAATCA 2455
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      AGAACACAGAACAAAGCCACCGCCGCTCACCTCTGTTCGCCGGCTGCGGAGCGGCAGCCG 2515
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CGCGCTGGTGCCTCGTCGCCATGCGTACGGCCTCCTGTTGCTCCTCCTCCTCCTCCTCCG 2575
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GGCTCCAAGAACGCCAAGAACTCCGGCGAACTCCCTCCCGGACCGAAGCAGGCGGCCGTC 2635
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CTCTCCTCCTCCTCTTCTCTCTTCGCTCTTCCAACTCTCTCTCTAAAATTTCTTGTTCTT 2695
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GCTTGATTTGCTTGGATCGGAGAGGAGAGACGCGGAGATGCGTTGGCGTGGGAGGAGCGG 2755
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      CGCGGTGGGGGGCTCGAGCTTTATCCGGAGCGGAGGGCGACGCCTCCAACGGTCGAGAGG 2815
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      ATCGACGGCCGGGATGGCGCGGCGTGGATTCAACGGCTGGGATCGGACGCGGGCGGAGTG 2875
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      AACGGTTGAAACTAGCCGTTGGGGACTGGTATTACGGGCAAGTGTTCGGCGGCGGGGTCA 2935
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      TCCATGGCAAGTACTGTAGTACTGTGTTTAAGCTTTGTTTGCTACTGAAAGACAGTGTTA 2995
consensus_2554#1      ------------------------------------------------------------
                                                                                  

consensus_2554#0      GCCTGGTAGTAATTACTTAATTAGGAGCAGTACATATGTGTACCAGCTCTATCTCTGTGA 3055
consensus_2554#1      ------------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)