cluster # 2558

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Oryza sativa
cluster # 2558 cluster # 2558 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2558#0 length = 2971 sequences # 1

consensus_2558#1 length = 676 sequences # 1

consensusID : consensus_2558#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2971
fasta sequence

                              [TGCACCTGCTGCCCCATTTCAGAGACTTGGAAAACCCCTAAAGCGTCCTGTCTCTCCCAGTTCAGATGAGCAGGAAAAGAAGAGACCAAGAAATAAGACCAAAAGACCACTGCCTGGCAAGAAATGGAGGAAAGCAAACTCAATTAAGGAATCATCATTGGATGACAACGATGTTGGAGAGGCAGCTGTGTCAGTTTCAGATGATGATGAAGATCAAGTTACAGAAGGCTCTGATGAGTTAACTGATGTTACCCTTGAAGGAGGTTTGAGAATTCCTGGCACACTTTACACGCAACTATTTGACTACCAGAAAGTGGGAGTGCAGTGGCTATGGGAGTTGCATTGTCAAAGGGCTGGTGGAATAATTGGAGATGAAATGGGCCTGGGAAAGACTGTGCAGGTCTTGTCATTTCTTGGTTCCTTGCATAACAGTGGGCTCTACAAGCCTAGCATTGTTGTTTGTCCTGTAACCCTTTTGCAACAGTGGCGAAGGGAGGCCAGTAGATGGTATCCAAAGTTCAAGGTTGAGATCTTACATGACTCTGCAAACAGTTCATCTAAAAAGAGCAAGAGGTCTAGTGATTCTGACAGTGAAGCTTCCTGGGATAGTGATCAGGAAGAAGCGGTTACATGTTCAAAACCTGCAAAGAAGTGGGATGACTTGATTTCACGTGTTGTGAGTTCAGGATCAGGTTTGCTTCTGACCACGTATGAGCAGTTAAGGATCCTAGGGGAGAAGTTGCTTGATATAGAATGGGGATATGCTGTATTGGATGAGGGTCACCGCATTAGGAATCCTAATGCTGAGATTACTCTTGTGTGCAAGCAATTGCAGACCGTGCACAGGATAATTATGACAGGTGCACCTATTCAAAACAAACTTTCGGAGCTTTGGTCTCTCTTTGATTTTGTGTTCCCTGGAAAACTAGGTGTCCTGCCTGTGTTTGAGGCTGAGTTTTCTGTTCCAATTACTGTTGGTGGGTACGCTAATGCAACACCATTGCAAGTGTCCACGGCGTATCGATGTGCTGTTGTCCTACGTGACCTGGTCATGCCGTACCTCCTTAGAAGAATGAAAGCTGATGTCAATGCACAGCTTCCCAAGAAAACAGAGCATGTTCTTTTCTGTAGTCTAACTACTGAGCAACGTGCTACTTATCGTGCATTTCTTGCTAGTTCGGAGGTGGAACAAATCTTTGATGGTAACAGAAATTCCCTTTATGGGATAGATGTTCTAAGGAAGATATGCAATCATCCTGATCTACTTGAGAGAGAACATGCTGCTCAGAATCCTGACTATGGGAATCCTGAAAGAAGTGGAAAGATGAAAGTGGTTGAGCAAGTTCTTAAAGTATGGAAAGAACAAGGTCATCGTGTTCTTCTTTTCACTCAGACACAACAAATGCTTGACATTATGGAGAACTTCTTGACAGCTTGCGAATACCAATACCGAAGAATGGATGGACTTACACCTGCAAAGCAAAGAATGGCACTTATTGATGAATTCAATAACACAGATGAAATTTTTATTTTCATTCTGACCACGAAAGTTGGTGGACTGGGTACGAATTTGACTGGTGCAAACCGGATTATTATATATGATCCTGACTGGAATCCTTCAACTGACATGCAGGCTAGGGAACGTGCATGGCGAATTGGGCAAACTAGAGATGTGACAGTTTATAGACTGATCACGCGTGGGACAATAGAGGAGAAAGTCTACCATCGTCAGATATACAAGCATTTCCTCACAAACAAAGTACTGAAAGACCCTCAGCAGAGGCGGTTTTTTAAAGCCAGAGACATGAAGGATTTGTTTACGCTGCAAGATGATGACAATAATGGCTCAACTGAAACATCAAATATTTTCAGCCAATTGTCTGAGGATGTGAATATCGGAGTTCCGAGTGACAAGCAACAAGACCAGCTATATGCAGCCTCTGCTACACCGACAACCTCTGGGACTGAACCGAGCTCATCCAGGCATGGACAGGGTAAAGAAGACCATTGCCCTGACCAAGCAGATGAAGAATGCAACATTTTGAAGAGCCTTTTTGATGCTCAAGGCATTCATAGTGCGATCAATCATGATGCCATAATGAACGCTAATGATGACCAGAAGCTGCGCCTAGAAGCAGAAGCTACACAGGTGGCACAAAGGGCAGCTGAAGCTTTACGCCAATCACGGATGCTCAGAAGTCATGAAAGTTTTTCTGTTCCTACATGGACTGGAAGAGCTGGTGCTGCGGGGGCACCATCCTCTGTCCGCAGGAAGTTTGGGTCAACACTCAATACCCAGTTGGTTAATTCTTCTCAGCCATCAGAAACTTCAAATGGCAGGGGCCAAAGTCTTCAGGTGGGTGCTCTAAATGGCAAAGCACTGTCCTCCGCTGAGCTTCTGGCCAGGATACGTGGAACCCGAGAGGGAGCAGCTTCAGATGCACTAGAACATCAACTCAACCTGGGATCAGCTTCCAATCACACATCGAGTTCATCAGGGAATGGCCGTGCATCAAGCTCTTCTACTAGGAGCATGATCGTACAGCCTGAAGTCCTAATCCGCCAATTGTGCACCTTCATACAGCAGCATGGTGGTTCCGCCAGCTCAACAAGTATAACTGAACACTTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATAGCTACGTTGCAAAGAGGTGCAAATGGTGCAACGTGGGTGCTGAAACCTGACTACCAGTAATATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATTCAGATTGGAGACGCAAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACTGAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAAAACATGTAGGTGACAGGTTGTAAATGCATGAATACAGACATTTGT]

[+] EMBL AK064456             [TGCACCTGCTGCCCCATTTCAGAGACTTGGAAAACCCCTAAAGCGTCCTGTCTCTCCCAGTTCAGATGAGCAGGAAAAGAAGAGACCAAGAAATAAGACCAAAAGACCACTGCCTGGCAAGAAATGGAGGAAAGCAAACTCAATTAAGGAATCATCATTGGATGACAACGATGTTGGAGAGGCAGCTGTGTCAGTTTCAGATGATGATGAAGATCAAGTTACAGAAGGCTCTGATGAGTTAACTGATGTTACCCTTGAAGGAGGTTTGAGAATTCCTGGCACACTTTACACGCAACTATTTGACTACCAGAAAGTGGGAGTGCAGTGGCTATGGGAGTTGCATTGTCAAAGGGCTGGTGGAATAATTGGAGATGAAATGGGCCTGGGAAAGACTGTGCAGGTCTTGTCATTTCTTGGTTCCTTGCATAACAGTGGGCTCTACAAGCCTAGCATTGTTGTTTGTCCTGTAACCCTTTTGCAACAGTGGCGAAGGGAGGCCAGTAGATGGTATCCAAAGTTCAAGGTTGAGATCTTACATGACTCTGCAAACAGTTCATCTAAAAAGAGCAAGAGGTCTAGTGATTCTGACAGTGAAGCTTCCTGGGATAGTGATCAGGAAGAAGCGGTTACATGTTCAAAACCTGCAAAGAAGTGGGATGACTTGATTTCACGTGTTGTGAGTTCAGGATCAGGTTTGCTTCTGACCACGTATGAGCAGTTAAGGATCCTAGGGGAGAAGTTGCTTGATATAGAATGGGGATATGCTGTATTGGATGAGGGTCACCGCATTAGGAATCCTAATGCTGAGATTACTCTTGTGTGCAAGCAATTGCAGACCGTGCACAGGATAATTATGACAGGTGCACCTATTCAAAACAAACTTTCGGAGCTTTGGTCTCTCTTTGATTTTGTGTTCCCTGGAAAACTAGGTGTCCTGCCTGTGTTTGAGGCTGAGTTTTCTGTTCCAATTACTGTTGGTGGGTACGCTAATGCAACACCATTGCAAGTGTCCACGGCGTATCGATGTGCTGTTGTCCTACGTGACCTGGTCATGCCGTACCTCCTTAGAAGAATGAAAGCTGATGTCAATGCACAGCTTCCCAAGAAAACAGAGCATGTTCTTTTCTGTAGTCTAACTACTGAGCAACGTGCTACTTATCGTGCATTTCTTGCTAGTTCGGAGGTGGAACAAATCTTTGATGGTAACAGAAATTCCCTTTATGGGATAGATGTTCTAAGGAAGATATGCAATCATCCTGATCTACTTGAGAGAGAACATGCTGCTCAGAATCCTGACTATGGGAATCCTGAAAGAAGTGGAAAGATGAAAGTGGTTGAGCAAGTTCTTAAAGTATGGAAAGAACAAGGTCATCGTGTTCTTCTTTTCACTCAGACACAACAAATGCTTGACATTATGGAGAACTTCTTGACAGCTTGCGAATACCAATACCGAAGAATGGATGGACTTACACCTGCAAAGCAAAGAATGGCACTTATTGATGAATTCAATAACACAGATGAAATTTTTATTTTCATTCTGACCACGAAAGTTGGTGGACTGGGTACGAATTTGACTGGTGCAAACCGGATTATTATATATGATCCTGACTGGAATCCTTCAACTGACATGCAGGCTAGGGAACGTGCATGGCGAATTGGGCAAACTAGAGATGTGACAGTTTATAGACTGATCACGCGTGGGACAATAGAGGAGAAAGTCTACCATCGTCAGATATACAAGCATTTCCTCACAAACAAAGTACTGAAAGACCCTCAGCAGAGGCGGTTTTTTAAAGCCAGAGACATGAAGGATTTGTTTACGCTGCAAGATGATGACAATAATGGCTCAACTGAAACATCAAATATTTTCAGCCAATTGTCTGAGGATGTGAATATCGGAGTTCCGAGTGACAAGCAACAAGACCAGCTATATGCAGCCTCTGCTACACCGACAACCTCTGGGACTGAACCGAGCTCATCCAGGCATGGACAGGGTAAAGAAGACCATTGCCCTGACCAAGCAGATGAAGAATGCAACATTTTGAAGAGCCTTTTTGATGCTCAAGGCATTCATAGTGCGATCAATCATGATGCCATAATGAACGCTAATGATGACCAGAAGCTGCGCCTAGAAGCAGAAGCTACACAGGTGGCACAAAGGGCAGCTGAAGCTTTACGCCAATCACGGATGCTCAGAAGTCATGAAAGTTTTTCTGTTCCTACATGGACTGGAAGAGCTGGTGCTGCGGGGGCACCATCCTCTGTCCGCAGGAAGTTTGGGTCAACACTCAATACCCAGTTGGTTAATTCTTCTCAGCCATCAGAAACTTCAAATGGCAGGGGCCAAAGTCTTCAGGTGGGTGCTCTAAATGGCAAAGCACTGTCCTCCGCTGAGCTTCTGGCCAGGATACGTGGAACCCGAGAGGGAGCAGCTTCAGATGCACTAGAACATCAACTCAACCTGGGATCAGCTTCCAATCACACATCGAGTTCATCAGGGAATGGCCGTGCATCAAGCTCTTCTACTAGGAGCATGATCGTACAGCCTGAAGTCCTAATCCGCCAATTGTGCACCTTCATACAGCAGCATGGTGGTTCCGCCAGCTCAACAAGTATAACTGAACACTTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATAGCTACGTTGCAAAGAGGTGCAAATGGTGCAACGTGGGTGCTGAAACCTGACTACCAGTAATATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATTCAGATTGGAGACGCAAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACTGAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAAAACATGTAGGTGACAGGTTGTAAATGCATGAATACAGACATTTGT]




>consensus_2558#0
TGCACCTGCTGCCCCATTTCAGAGACTTGGAAAACCCCTAAAGCGTCCTGTCTCTCCCAG
TTCAGATGAGCAGGAAAAGAAGAGACCAAGAAATAAGACCAAAAGACCACTGCCTGGCAA
GAAATGGAGGAAAGCAAACTCAATTAAGGAATCATCATTGGATGACAACGATGTTGGAGA
GGCAGCTGTGTCAGTTTCAGATGATGATGAAGATCAAGTTACAGAAGGCTCTGATGAGTT
AACTGATGTTACCCTTGAAGGAGGTTTGAGAATTCCTGGCACACTTTACACGCAACTATT
TGACTACCAGAAAGTGGGAGTGCAGTGGCTATGGGAGTTGCATTGTCAAAGGGCTGGTGG
AATAATTGGAGATGAAATGGGCCTGGGAAAGACTGTGCAGGTCTTGTCATTTCTTGGTTC
CTTGCATAACAGTGGGCTCTACAAGCCTAGCATTGTTGTTTGTCCTGTAACCCTTTTGCA
ACAGTGGCGAAGGGAGGCCAGTAGATGGTATCCAAAGTTCAAGGTTGAGATCTTACATGA
CTCTGCAAACAGTTCATCTAAAAAGAGCAAGAGGTCTAGTGATTCTGACAGTGAAGCTTC
CTGGGATAGTGATCAGGAAGAAGCGGTTACATGTTCAAAACCTGCAAAGAAGTGGGATGA
CTTGATTTCACGTGTTGTGAGTTCAGGATCAGGTTTGCTTCTGACCACGTATGAGCAGTT
AAGGATCCTAGGGGAGAAGTTGCTTGATATAGAATGGGGATATGCTGTATTGGATGAGGG
TCACCGCATTAGGAATCCTAATGCTGAGATTACTCTTGTGTGCAAGCAATTGCAGACCGT
GCACAGGATAATTATGACAGGTGCACCTATTCAAAACAAACTTTCGGAGCTTTGGTCTCT
CTTTGATTTTGTGTTCCCTGGAAAACTAGGTGTCCTGCCTGTGTTTGAGGCTGAGTTTTC
TGTTCCAATTACTGTTGGTGGGTACGCTAATGCAACACCATTGCAAGTGTCCACGGCGTA
TCGATGTGCTGTTGTCCTACGTGACCTGGTCATGCCGTACCTCCTTAGAAGAATGAAAGC
TGATGTCAATGCACAGCTTCCCAAGAAAACAGAGCATGTTCTTTTCTGTAGTCTAACTAC
TGAGCAACGTGCTACTTATCGTGCATTTCTTGCTAGTTCGGAGGTGGAACAAATCTTTGA
TGGTAACAGAAATTCCCTTTATGGGATAGATGTTCTAAGGAAGATATGCAATCATCCTGA
TCTACTTGAGAGAGAACATGCTGCTCAGAATCCTGACTATGGGAATCCTGAAAGAAGTGG
AAAGATGAAAGTGGTTGAGCAAGTTCTTAAAGTATGGAAAGAACAAGGTCATCGTGTTCT
TCTTTTCACTCAGACACAACAAATGCTTGACATTATGGAGAACTTCTTGACAGCTTGCGA
ATACCAATACCGAAGAATGGATGGACTTACACCTGCAAAGCAAAGAATGGCACTTATTGA
TGAATTCAATAACACAGATGAAATTTTTATTTTCATTCTGACCACGAAAGTTGGTGGACT
GGGTACGAATTTGACTGGTGCAAACCGGATTATTATATATGATCCTGACTGGAATCCTTC
AACTGACATGCAGGCTAGGGAACGTGCATGGCGAATTGGGCAAACTAGAGATGTGACAGT
TTATAGACTGATCACGCGTGGGACAATAGAGGAGAAAGTCTACCATCGTCAGATATACAA
GCATTTCCTCACAAACAAAGTACTGAAAGACCCTCAGCAGAGGCGGTTTTTTAAAGCCAG
AGACATGAAGGATTTGTTTACGCTGCAAGATGATGACAATAATGGCTCAACTGAAACATC
AAATATTTTCAGCCAATTGTCTGAGGATGTGAATATCGGAGTTCCGAGTGACAAGCAACA
AGACCAGCTATATGCAGCCTCTGCTACACCGACAACCTCTGGGACTGAACCGAGCTCATC
CAGGCATGGACAGGGTAAAGAAGACCATTGCCCTGACCAAGCAGATGAAGAATGCAACAT
TTTGAAGAGCCTTTTTGATGCTCAAGGCATTCATAGTGCGATCAATCATGATGCCATAAT
GAACGCTAATGATGACCAGAAGCTGCGCCTAGAAGCAGAAGCTACACAGGTGGCACAAAG
GGCAGCTGAAGCTTTACGCCAATCACGGATGCTCAGAAGTCATGAAAGTTTTTCTGTTCC
TACATGGACTGGAAGAGCTGGTGCTGCGGGGGCACCATCCTCTGTCCGCAGGAAGTTTGG
GTCAACACTCAATACCCAGTTGGTTAATTCTTCTCAGCCATCAGAAACTTCAAATGGCAG
GGGCCAAAGTCTTCAGGTGGGTGCTCTAAATGGCAAAGCACTGTCCTCCGCTGAGCTTCT
GGCCAGGATACGTGGAACCCGAGAGGGAGCAGCTTCAGATGCACTAGAACATCAACTCAA
CCTGGGATCAGCTTCCAATCACACATCGAGTTCATCAGGGAATGGCCGTGCATCAAGCTC
TTCTACTAGGAGCATGATCGTACAGCCTGAAGTCCTAATCCGCCAATTGTGCACCTTCAT
ACAGCAGCATGGTGGTTCCGCCAGCTCAACAAGTATAACTGAACACTTCAAGAACCGGAT
ACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATAGCTACGTTGCAAAG
AGGTGCAAATGGTGCAACGTGGGTGCTGAAACCTGACTACCAGTAATATTAGCTATAGCT
GCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATTCAGATTGGAGACGC
AAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACTGAATTCTTTTTGTA
GGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAAAACATGTAGGTGAC
AGGTTGTAAATGCATGAATACAGACATTTGT

consensusID : consensus_2558#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence

                              [TCTGTTCCCCTTTACGGGTTTCGGCCCGGCGTCCCGGGCACCCCCCGGAGGACGGCGCCTTACCACGCCCTAAAACCCTTCCCTTACGCGTGGGGGTAAGCTCCCCAGTCCCACCTTGAGGTTCATCAAGGCAATGGCCGTGCATCCAGGTTTTTCTATTAGGAGCCATATGGTACACCCTGAAGTCCTAATCCGCCAAATGTGGCACTTTCATACACAACCATGGGTGGTTCCGCCAGCTCACCAAGTATAATTGAACACTTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATAGCTACGTTGCAAAGAGGTGCAAATGGCGCAACGTGGGTGCTGAAACCTGACTACCAGTAATATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATTCAGATTGGAGATGCAAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACTGAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAAAACATGTAGGTGACAGGTTGTTAATGCATGAATACAAACCTTTGTCGCTGGAAGCATTTCTTGTGGATTTTTTGTAGCCGTATTGAATGATCAGTGGTATGTTGTCAAAAAAAAA]

[-] EMBL CA762948             [TCTGTTCCCCTTTACGGGTTTCGGCCCGGCGTCCCGGGCACCCCCCGGAGGACGGCGCCTTACCACGCCCTAAAACCCTTCCCTTACGCGTGGGGGTAAGCTCCCCAGTCCCACCTTGAGGTTCATCAAGGCAATGGCCGTGCATCCAGGTTTTTCTATTAGGAGCCATATGGTACACCCTGAAGTCCTAATCCGCCAAATGTGGCACTTTCATACACAACCATGGGTGGTTCCGCCAGCTCACCAAGTATAATTGAACACTTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATAGCTACGTTGCAAAGAGGTGCAAATGGCGCAACGTGGGTGCTGAAACCTGACTACCAGTAATATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATTCAGATTGGAGATGCAAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACTGAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAAAACATGTAGGTGACAGGTTGTTAATGCATGAATACAAACCTTTGTCGCTGGAAGCATTTCTTGTGGATTTTTTGTAGCCGTATTGAATGATCAGTGGTATGTTGTCAAAAAAAAA]




>consensus_2558#1
TCTGTTCCCCTTTACGGGTTTCGGCCCGGCGTCCCGGGCACCCCCCGGAGGACGGCGCCT
TACCACGCCCTAAAACCCTTCCCTTACGCGTGGGGGTAAGCTCCCCAGTCCCACCTTGAG
GTTCATCAAGGCAATGGCCGTGCATCCAGGTTTTTCTATTAGGAGCCATATGGTACACCC
TGAAGTCCTAATCCGCCAAATGTGGCACTTTCATACACAACCATGGGTGGTTCCGCCAGC
TCACCAAGTATAATTGAACACTTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTT
AAGAATCTGCTGAAGGAAATAGCTACGTTGCAAAGAGGTGCAAATGGCGCAACGTGGGTG
CTGAAACCTGACTACCAGTAATATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGA
ACAGCATAAATTAATTTCATTCAGATTGGAGATGCAAAAATCGATGAGGGAAATGCCTCT
AATGCCTTTTTGATGAAGACTGAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTA
GATATACAAATCTGAAACAAAAACATGTAGGTGACAGGTTGTTAATGCATGAATACAAAC
CTTTGTCGCTGGAAGCATTTCTTGTGGATTTTTTGTAGCCGTATTGAATGATCAGTGGTA
TGTTGTCAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2558#0      TGCACCTGCTGCCCCATTTCAGAGACTTGGAAAACCCCTAAAGCGTCCTGTCTCTCCCAG 60
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TTCAGATGAGCAGGAAAAGAAGAGACCAAGAAATAAGACCAAAAGACCACTGCCTGGCAA 120
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GAAATGGAGGAAAGCAAACTCAATTAAGGAATCATCATTGGATGACAACGATGTTGGAGA 180
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GGCAGCTGTGTCAGTTTCAGATGATGATGAAGATCAAGTTACAGAAGGCTCTGATGAGTT 240
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AACTGATGTTACCCTTGAAGGAGGTTTGAGAATTCCTGGCACACTTTACACGCAACTATT 300
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TGACTACCAGAAAGTGGGAGTGCAGTGGCTATGGGAGTTGCATTGTCAAAGGGCTGGTGG 360
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AATAATTGGAGATGAAATGGGCCTGGGAAAGACTGTGCAGGTCTTGTCATTTCTTGGTTC 420
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      CTTGCATAACAGTGGGCTCTACAAGCCTAGCATTGTTGTTTGTCCTGTAACCCTTTTGCA 480
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      ACAGTGGCGAAGGGAGGCCAGTAGATGGTATCCAAAGTTCAAGGTTGAGATCTTACATGA 540
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      CTCTGCAAACAGTTCATCTAAAAAGAGCAAGAGGTCTAGTGATTCTGACAGTGAAGCTTC 600
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      CTGGGATAGTGATCAGGAAGAAGCGGTTACATGTTCAAAACCTGCAAAGAAGTGGGATGA 660
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      CTTGATTTCACGTGTTGTGAGTTCAGGATCAGGTTTGCTTCTGACCACGTATGAGCAGTT 720
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AAGGATCCTAGGGGAGAAGTTGCTTGATATAGAATGGGGATATGCTGTATTGGATGAGGG 780
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TCACCGCATTAGGAATCCTAATGCTGAGATTACTCTTGTGTGCAAGCAATTGCAGACCGT 840
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GCACAGGATAATTATGACAGGTGCACCTATTCAAAACAAACTTTCGGAGCTTTGGTCTCT 900
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      CTTTGATTTTGTGTTCCCTGGAAAACTAGGTGTCCTGCCTGTGTTTGAGGCTGAGTTTTC 960
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TGTTCCAATTACTGTTGGTGGGTACGCTAATGCAACACCATTGCAAGTGTCCACGGCGTA 1020
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TCGATGTGCTGTTGTCCTACGTGACCTGGTCATGCCGTACCTCCTTAGAAGAATGAAAGC 1080
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TGATGTCAATGCACAGCTTCCCAAGAAAACAGAGCATGTTCTTTTCTGTAGTCTAACTAC 1140
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TGAGCAACGTGCTACTTATCGTGCATTTCTTGCTAGTTCGGAGGTGGAACAAATCTTTGA 1200
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TGGTAACAGAAATTCCCTTTATGGGATAGATGTTCTAAGGAAGATATGCAATCATCCTGA 1260
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TCTACTTGAGAGAGAACATGCTGCTCAGAATCCTGACTATGGGAATCCTGAAAGAAGTGG 1320
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AAAGATGAAAGTGGTTGAGCAAGTTCTTAAAGTATGGAAAGAACAAGGTCATCGTGTTCT 1380
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TCTTTTCACTCAGACACAACAAATGCTTGACATTATGGAGAACTTCTTGACAGCTTGCGA 1440
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      ATACCAATACCGAAGAATGGATGGACTTACACCTGCAAAGCAAAGAATGGCACTTATTGA 1500
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TGAATTCAATAACACAGATGAAATTTTTATTTTCATTCTGACCACGAAAGTTGGTGGACT 1560
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GGGTACGAATTTGACTGGTGCAAACCGGATTATTATATATGATCCTGACTGGAATCCTTC 1620
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AACTGACATGCAGGCTAGGGAACGTGCATGGCGAATTGGGCAAACTAGAGATGTGACAGT 1680
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TTATAGACTGATCACGCGTGGGACAATAGAGGAGAAAGTCTACCATCGTCAGATATACAA 1740
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GCATTTCCTCACAAACAAAGTACTGAAAGACCCTCAGCAGAGGCGGTTTTTTAAAGCCAG 1800
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AGACATGAAGGATTTGTTTACGCTGCAAGATGATGACAATAATGGCTCAACTGAAACATC 1860
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AAATATTTTCAGCCAATTGTCTGAGGATGTGAATATCGGAGTTCCGAGTGACAAGCAACA 1920
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      AGACCAGCTATATGCAGCCTCTGCTACACCGACAACCTCTGGGACTGAACCGAGCTCATC 1980
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      CAGGCATGGACAGGGTAAAGAAGACCATTGCCCTGACCAAGCAGATGAAGAATGCAACAT 2040
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TTTGAAGAGCCTTTTTGATGCTCAAGGCATTCATAGTGCGATCAATCATGATGCCATAAT 2100
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GAACGCTAATGATGACCAGAAGCTGCGCCTAGAAGCAGAAGCTACACAGGTGGCACAAAG 2160
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GGCAGCTGAAGCTTTACGCCAATCACGGATGCTCAGAAGTCATGAAAGTTTTTCTGTTCC 2220
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      TACATGGACTGGAAGAGCTGGTGCTGCGGGGGCACCATCCTCTGTCCGCAGGAAGTTTGG 2280
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GTCAACACTCAATACCCAGTTGGTTAATTCTTCTCAGCCATCAGAAACTTCAAATGGCAG 2340
consensus_2558#1      ------------------------------------------------------------
                                                                                  

consensus_2558#0      GGGCCAAAGTCTTCAGGTGGGTGCTCTAAATGGCAAAGCACTGTCCTCCGCT--GAGCTT 2398
consensus_2558#1      ---------------------------------------TCTGTTCCCCTTTACGGGTTT 21
                                                              **** * **  *  * * **

consensus_2558#0      CTGGCCAGGATACGTGGAACCC---GAGAGGGAGCAGCTTCAGATGCACTAGAACATCAA 2455
consensus_2558#1      CGGCCCGGCGTCCCGGGCACCCCCCGGAGGACGGCGCCTTACCACGCCCTAAAACCCTTC 81
                      * * ** *  * *  ** ****   *   *   **  ***   * ** *** ***     

consensus_2558#0      CTCAACCTG---GGATCAGCTTCC-AATCACACATCGAG-TTCATCAGGG-AATGGCCGT 2509
consensus_2558#1      CCTTACGCGTGGGGGTAAGCTCCCCAGTCCCACCTTGAGGTTCATCAAGGCAATGGCCGT 141
                      *   **  *   ** * **** ** * ** *** * *** ******* ** *********

consensus_2558#0      GCATC-AAGCTCTTCTACTAGGAGCATGATCGTACAGCCTGAAGTCCTAATCCGCCAATT 2568
consensus_2558#1      GCATCCAGGTTTTTCTATTAGGAGCCATATGGTACACCCTGAAGTCCTAATCCGCCAAAT 201
                      ***** * * * ***** *******   ** ***** ********************* *

consensus_2558#0      GTG-CACCTTCATACAGCAGCATGG-TGGTTCCGCCAGCTCAACAAGTATAACTGAACAC 2626
consensus_2558#1      GTGGCACTTTCATACACAACCATGGGTGGTTCCGCCAGCTCACCAAGTATAATTGAACAC 261
                      *** *** ********  * ***** **************** ********* *******

consensus_2558#0      TTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATA 2686
consensus_2558#1      TTCAAGAACCGGATACTGTCCAAGGATATGCTGCTGTTTAAGAATCTGCTGAAGGAAATA 321
                      ************************************************************

consensus_2558#0      GCTACGTTGCAAAGAGGTGCAAATGGTGCAACGTGGGTGCTGAAACCTGACTACCAGTAA 2746
consensus_2558#1      GCTACGTTGCAAAGAGGTGCAAATGGCGCAACGTGGGTGCTGAAACCTGACTACCAGTAA 381
                      ************************** *********************************

consensus_2558#0      TATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATT 2806
consensus_2558#1      TATTAGCTATAGCTGCAAAGTTTTGGCTAGGTGTAGCGAACAGCATAAATTAATTTCATT 441
                      ************************************************************

consensus_2558#0      CAGATTGGAGACGCAAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACT 2866
consensus_2558#1      CAGATTGGAGATGCAAAAATCGATGAGGGAAATGCCTCTAATGCCTTTTTGATGAAGACT 501
                      *********** ************************************************

consensus_2558#0      GAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAA 2926
consensus_2558#1      GAATTCTTTTTGTAGGCAATATACAACTTTTGTAGGGTAGATATACAAATCTGAAACAAA 561
                      ************************************************************

consensus_2558#0      AACATGTAGGTGACAGGTTGTAAATGCATGAATACAGACATTTGT--------------- 2971
consensus_2558#1      AACATGTAGGTGACAGGTTGTTAATGCATGAATACAAACCTTTGTCGCTGGAAGCATTTC 621
                      ********************* ************** ** *****               

consensus_2558#0      -------------------------------------------------------
consensus_2558#1      TTGTGGATTTTTTGTAGCCGTATTGAATGATCAGTGGTATGTTGTCAAAAAAAAA 676