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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 256 cluster # 256       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_256#0 length = 626 sequences # 2  

consensusID : consensus_256#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 626
fasta sequence
                              [TTTTTTTTTTTTTTTTTATGAAGCTCGGCTCGTAAACGAAGTTCCATAGATTTCAACACCGCAAAGTACGTAGTTAATGCCTGCAACTACGTAAGGAGCTGGGTACAACCGTACAAATTAAGTAGAGAACAATCAAACAGCATGAACAAACGAAAGATAAATAAACAGAAGCTGCTTGCCACATGACCCATTTTTTTGTTCTTCTATCCAAGCTTGGTTCACCGCGTGAAGGCCAGCCTCTCTCCAGCCGGCAACAATGCCGCTCGCCGGCCTCTATCAGCAATGTGCATGGCTCCAGCCGACACTGCTAGCTACCTGCCCGAGCAGTAGTGAGCACTTCATCTCCTGAAACCTATATACATCATTTACGCACGCGTGCATGAAGTGAAAGACATAACCAGTTGTTCAAAACATCAATCAGGATTGACGAGGATGCCATGCATGCACCTACTAATTAACACCAATGCATGCAGTAATAGAGCTAGATATCCATGCTTGCGCATGAACTCACATGATACAAGCAAGCATGCATATATCTCTGGCCTTCTCAAACTTGGATAGAAGAGAGGAGACCAGGAGGTAGCAGGCCGGAACCTCTCCCTCTCTGGTCGCCCCCCCCTTGTCTC]

[+] EMBL CA760603             [TTTTTTTTTTTTTTTTTATGAAGCTCGGCTCGTAAACGAAGTTCCATAGATTTCAACACCGCAAAGTACGTAGTTAATGCCTGCAACTACGTAAGGAGCTGGGTACAACCGTACAAATTAAGTAGAGAACAATCAAACAGCATGAACAAACGAAAGATAAATAAACAGAAGCTGCTTGCCACATGACCCATTTTTTTGTTCTTCTATCCAAGCTTGGTTCACCGCGTGAAGGCCAGCCTCTCTCCAGCCGGCAACAATGCCGCTCGCCGGCCTCTATCAGCAATGTGCATGGCTCCAGCCGACACTGCTAGCTACCTGCCCGAGCAGTAGTGAGCACTTCATCTCCTGAAACCTATATACATCATTTACGCACGCGTGCATGAAGTGAAAGACATAACCAGTTGTTCAAAACATCAATCAGGATTGACGAGGATGCCATGCATGCACCTACTAATTAACACCAATGCATGCAGTAATAGAGCTAGATATCCATGCTTGCGCATGAACTCACATGATACAAGCAAGCATGCATATATCTCTGGCCTTCTCAAACTTGGATAGAAGAGAGGAGACCAGGAGGTAGCAGGCCGGAACCTCTCCCTCTCTGGTCGCCCCCCCCTTGTCTC]
[-] EMBL CA766617             [                                    CGAAGTTCCATAGATTTCAACACCGCAGAGTACGTAGTTAATGCCTGCAACTACGTAAGGAGCTGGGTACAACCGTACAAATTAAGTAGAGAACAATCAAACAGCATGAACAAACGAAAGATAAATAAACAGAAGCTGCTTGCCACATGACCCATTTTTTTGTTCTTCTATCCTAGCTTGGTTCACCGCGTGAAGGCCAGCCTCTCTCCAGCCGGCAACAATGCCGCTCGCCGGCCTCTATCAGCAATGTGCATGGCTCCAGCCGACACTGCTAGCTACCTGCCCGAGCAGTAGTGAGCACTTCATCTCCTGAAACCTATATACATCATTTACGCACGCGTGCATGAAGTGAAAGACATAACCAGTTGTTCAAAACATCAATCAGGATTGACGAGAATGCCATGCATGCACCTACTAATTAACACCAATGCATGCAGTAATAGAGCTAGATATCCATGCTTGCGCATGAACTCACATGATACAAGCAAGCATGCATATATCTCTGGCCTTCTCAAACTTGGATAGAAGAGAGGAGACCAGGAGGTAGCAGGCCGGAACCTCTCCCTCTCg                    ]


>consensus_256#0 TTTTTTTTTTTTTTTTTATGAAGCTCGGCTCGTAAACGAAGTTCCATAGATTTCAACACC GCAAAGTACGTAGTTAATGCCTGCAACTACGTAAGGAGCTGGGTACAACCGTACAAATTA AGTAGAGAACAATCAAACAGCATGAACAAACGAAAGATAAATAAACAGAAGCTGCTTGCC ACATGACCCATTTTTTTGTTCTTCTATCCAAGCTTGGTTCACCGCGTGAAGGCCAGCCTC TCTCCAGCCGGCAACAATGCCGCTCGCCGGCCTCTATCAGCAATGTGCATGGCTCCAGCC GACACTGCTAGCTACCTGCCCGAGCAGTAGTGAGCACTTCATCTCCTGAAACCTATATAC ATCATTTACGCACGCGTGCATGAAGTGAAAGACATAACCAGTTGTTCAAAACATCAATCA GGATTGACGAGGATGCCATGCATGCACCTACTAATTAACACCAATGCATGCAGTAATAGA GCTAGATATCCATGCTTGCGCATGAACTCACATGATACAAGCAAGCATGCATATATCTCT GGCCTTCTCAAACTTGGATAGAAGAGAGGAGACCAGGAGGTAGCAGGCCGGAACCTCTCC CTCTCTGGTCGCCCCCCCCTTGTCTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)