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Oryza sativa
cluster # 258 cluster # 258       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_258#0 length = 1781 sequences # 2  

consensusID : consensus_258#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1781
fasta sequence
                              [CGCCTCGCCGCCCAGCTGCTGCCGCTGCGCTTGCGCGTCCTCACTGGAAAGATGGCCCCCCTCTGCTCTGGCCCCTCTCCACTGCGGTATGAATGAATGATGCGCCTTTTCTCCCTCCCCCCGCCCAGATCGATCGCCAGACCTGCACTTTCCAGTTCCCCATCCATGCTCTGTCTGCTTCATCCTGTCCCAGCTTCTTCTTCTTCTTCTTCTTGTTGTTGTTGTTGTTCTTGGTGCGGGAGGGTGTTCTTGGGGTAGGGAGCAGCATCGGCGGCGGCGGCGGTCATGGCGAAGGAGACCGAGTTCTACGACGTGCTCGGCGTCTGCCCCGCCGCCTCCGACGACGAGATCCGCAAGGCCTACTACATCAAGGCGAGGCAGGTGCATCCTGACAAGAACCCCAATGATCCGCAAGCCGCCGAGAAATTCCAGGCTCTCGGAGAGGCCTACCAGGTGCTGAGTGATCCTCTTCAGAGGAAGGCCTACGATGGCTATGGCAAGACCAGCATTTCCAAGGAGAACATGCTGGATGGCACTGTGGTGTTCACCCTTCTTTTCGGGAGTGAGCTGTTTGAGGACTACATTGGCCACCTTGCAATGGCAACAATGGCTTCCTCCGAGATGGCCAGCGACAATGACAACCCTGAACAGCTTCAGGACAGGCTCAAGGGTGTGCAAAGGGAAAGAGAAGAGAAGCTAGCAAGATTCCTCAAGGAGTTCCTCTTGCAATACGTTCGTGGTGACCAGGAAGGATTCGCAAGCCGTGCCGAATCCGAGGCCAAGAGGCTGTCCAGCACTTCATCTGGACTAGACATTCTTCGCACAATTGGATATGTGTACTCCCGGCAAGCTGCAAAGGAGCTTGGCAAGAAGGCCATGTACCTTGGAGTCCCATTCCTGGCAGAGTGGGTGAGGAACAAGGGTCACCTATGGAGGTCACAGATCACCGCGGCGAAAGGAGCCTTGCAGTTGCTGCAGCTGCAAGAGGAGGCCTGCCGGCAGAGCGGTAAGGACGGCTTGGCCACCGAGAGGGATGTCGATCTGCAGATGAGGATGAACAAAGACCTGATGATGAGCTCACTGTGGAAGCTGAATATTGTTGATATTGAAGTGACCCTTCTACACGTTTGTGAAATGGTGTTGCATGAAAACAATGTCAAGAAAGAGGATCTCAAGGCTCGTGCAATGGCACTGAAAATTCTTGGGAAGATATTCCAGAGGGACAAGGAGGCATTGCCAGGACCATCAAAACCGACCATTCTCGATGATGACAGCAGCTCTGATGAAAGTTCAGATGACGACGTGGCTCGGACAGTGCCTTATCGGACTCCTGCAGTTACTCAGGGAATTGGCAGGTTATTCAGATGCTTATGCAACCCAGCATATGATGTTGACGATGACTTTGAACCACGCAAATGAGTGGTAAAGTAGCAGAGAGGTTGCAACTATTTAAGAGATCCCTGAATCTTTCCAGATTATGTGCTTCTGAACAGTTGGGGATCATGCATCACCATAATTTGTCTGGGTGTGCATTGTAGATTCTACTGCAGCACTGGTGATCAGGCCATTAGCTCAAAATCGTTCTTTTTCTGTCCATGAACAGTAGATTCTTTCTTAGTTTTTGATATAGATTTTATCGAATTGTGTGGTGTTTATGTAATTGTTTGGTTTGGGAGTTGTCAAAAGAAAGAAAGCAAGAACAAGTGTAACTGGAAGTCCATTTCTCTCTGATTTTAAAATCACACGTAAAACTCTGACATGAAAAATCAACTTTTGATCCA]

[+] EMBL AK108057             [CGCCTCGCCGCCCAGCTGCTGCCGCTGCGCTTGCGCGTCCTCACTGGAAAGATGGCCCCCCTCTGCTCTGGCCCCTCTCCACTGCGGTATGAATGAATGATGCGCCTTTTCTCCCTCCCCCCGCCCAGATCGATCGCCAGACCTGCACTTTCCAGTTCCCCATCCATGCTCTGTCTGCTTCATCCTGTCCCAGCTTCTTCTTCTTCTTCTTCTTGTTGTTGTTGTTGTTCTTGGTGCGGGAGGGTGTTCTTGGGGTAGGGAGCAGCATCGGCGGCGGCGGCGGTCATGGCGAAGGAGACCGAGTTCTACGACGTGCTCGGCGTCTGCCCCGCCGCCTCCGACGACGAGATCCGCAAGGCCTACTACATCAAGGCGAGGCAGGTGCATCCTGACAAGAACCCCAATGATCCGCAAGCCGCCGAGAAATTCCAGGCTCTCGGAGAGGCCTACCAGGTGCTGAGTGATCCTCTTCAGAGGAAGGCCTACGATGGCTATGGCAAGACCAGCATTTCCAAGGAGAACATGCTGGATGGCACTGTGGTGTTCACCCTTCTTTTCGGGAGTGAGCTGTTTGAGGACTACATTGGCCACCTTGCAATGGCAACAATGGCTTCCTCCGAGATGGCCAGCGACAATGACAACCCTGAACAGCTTCAGGACAGGCTCAAGGGTGTGCAAAGGGAAAGAGAAGAGAAGCTAGCAAGATTCCTCAAGGAGTTCCTCTTGCAATACGTTCGTGGTGACCAGGAAGGATTCGCAAGCCGTGCCGAATCCGAGGCCAAGAGGCTGTCCAGCACTTCATCTGGACTAGACATTCTTCGCACAATTGGATATGTGTACTCCCGGCAAGCTGCAAAGGAGCTTGGCAAGAAGGCCATGTACCTTGGAGTCCCATTCCTGGCAGAGTGGGTGAGGAACAAGGGTCACCTATGGAGGTCACAGATCACCGCGGCGAAAGGAGCCTTGCAGTTGCTGCAGCTGCAAGAGGAGGCCTGCCGGCAGAGCGGTAAGGACGGCTTGGCCACCGAGAGGGATGTCGATCTGCAGATGAGGATGAACAAAGACCTGATGATGAGCTCACTGTGGAAGCTGAATATTGTTGATATTGAAGTGACCCTTCTACACGTTTGTGAAATGGTGTTGCATGAAAACAATGTCAAGAAAGAGGATCTCAAGGCTCGTGCAATGGCACTGAAAATTCTTGGGAAGATATTCCAGAGGGACAAGGAGGCATTGCCAGGACCATCAAAACCGACCATTCTCGATGATGACAGCAGCTCTGATGAAAGTTCAGATGACGACGTGGCTCGGACAGTGCCTTATCGGACTCCTGCAGTTACTCAGGGAATTGGCAGGTTATTCAGATGCTTATGCAACCCAGCATATGATGTTGACGATGACTTTGAACCACGCAAATGAGTGGTAAAGTAGCAGAGAGGTTGCAACTATTTAAGAGATCCCTGAATCTTTCCAGATTATGTGCTTCTGAACAGTTGGGGATCATGCATCACCATAATTTGTCTGGGTGTGCATTGTAGATTCTACTGCAGCACTGGTGATCAGGCCATTAGCTCAAAATCGTTCTTTTTCTGTCCATGAACAGTAGATTCTTTCTTAGTTTTTGATATAGATTTTATCGAATTGTGTGGTGTTTATGTAATTGTTTGGTTTGGGAGTTGTCAAAAGAAAGAAAGCAAGAACAA                                                                              ]
[+] EMBL CF328879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gcggtatGACAGTGCCTTATCGGACTCCTGCAGTTACTCAGGGAATTGGCAGGTTATTCAGATGCTTATGCAACCCAGCATATGATGTTGACGATGACTTTGAACCACGCAAATGAGTGGTAAAGTAGCAGAGAGGTTGCAACTATTTAAGAGATCCCTGAATCTTTCCAGATTATGTGCTTCTGAACAGTTGGGGATCATGCATCACCATAATTTGTCTGGTTGTGCATTGTAGATTCTACTGCAGCACTGGTGATCAGGCCATTAGCTCAAAATCGTTCTTTTTCTGTCCATGAACAGTAGATTCTTTCTTGGTTTTTGATATAGATTTTATCGAATTGTGTGGTGTTTATGTAATTGTTTGGTTTGGGAGTTGTCAAAAGAAAGAAAGCAAGAACAAGTGTAACTGGAAGTCCATTTCTCTCTGATTTTAAAATCACACGTAAAACTCTGACATGAAAAATCAACTTTTGATCCA]


>consensus_258#0 CGCCTCGCCGCCCAGCTGCTGCCGCTGCGCTTGCGCGTCCTCACTGGAAAGATGGCCCCC CTCTGCTCTGGCCCCTCTCCACTGCGGTATGAATGAATGATGCGCCTTTTCTCCCTCCCC CCGCCCAGATCGATCGCCAGACCTGCACTTTCCAGTTCCCCATCCATGCTCTGTCTGCTT CATCCTGTCCCAGCTTCTTCTTCTTCTTCTTCTTGTTGTTGTTGTTGTTCTTGGTGCGGG AGGGTGTTCTTGGGGTAGGGAGCAGCATCGGCGGCGGCGGCGGTCATGGCGAAGGAGACC GAGTTCTACGACGTGCTCGGCGTCTGCCCCGCCGCCTCCGACGACGAGATCCGCAAGGCC TACTACATCAAGGCGAGGCAGGTGCATCCTGACAAGAACCCCAATGATCCGCAAGCCGCC GAGAAATTCCAGGCTCTCGGAGAGGCCTACCAGGTGCTGAGTGATCCTCTTCAGAGGAAG GCCTACGATGGCTATGGCAAGACCAGCATTTCCAAGGAGAACATGCTGGATGGCACTGTG GTGTTCACCCTTCTTTTCGGGAGTGAGCTGTTTGAGGACTACATTGGCCACCTTGCAATG GCAACAATGGCTTCCTCCGAGATGGCCAGCGACAATGACAACCCTGAACAGCTTCAGGAC AGGCTCAAGGGTGTGCAAAGGGAAAGAGAAGAGAAGCTAGCAAGATTCCTCAAGGAGTTC CTCTTGCAATACGTTCGTGGTGACCAGGAAGGATTCGCAAGCCGTGCCGAATCCGAGGCC AAGAGGCTGTCCAGCACTTCATCTGGACTAGACATTCTTCGCACAATTGGATATGTGTAC TCCCGGCAAGCTGCAAAGGAGCTTGGCAAGAAGGCCATGTACCTTGGAGTCCCATTCCTG GCAGAGTGGGTGAGGAACAAGGGTCACCTATGGAGGTCACAGATCACCGCGGCGAAAGGA GCCTTGCAGTTGCTGCAGCTGCAAGAGGAGGCCTGCCGGCAGAGCGGTAAGGACGGCTTG GCCACCGAGAGGGATGTCGATCTGCAGATGAGGATGAACAAAGACCTGATGATGAGCTCA CTGTGGAAGCTGAATATTGTTGATATTGAAGTGACCCTTCTACACGTTTGTGAAATGGTG TTGCATGAAAACAATGTCAAGAAAGAGGATCTCAAGGCTCGTGCAATGGCACTGAAAATT CTTGGGAAGATATTCCAGAGGGACAAGGAGGCATTGCCAGGACCATCAAAACCGACCATT CTCGATGATGACAGCAGCTCTGATGAAAGTTCAGATGACGACGTGGCTCGGACAGTGCCT TATCGGACTCCTGCAGTTACTCAGGGAATTGGCAGGTTATTCAGATGCTTATGCAACCCA GCATATGATGTTGACGATGACTTTGAACCACGCAAATGAGTGGTAAAGTAGCAGAGAGGT TGCAACTATTTAAGAGATCCCTGAATCTTTCCAGATTATGTGCTTCTGAACAGTTGGGGA TCATGCATCACCATAATTTGTCTGGGTGTGCATTGTAGATTCTACTGCAGCACTGGTGAT CAGGCCATTAGCTCAAAATCGTTCTTTTTCTGTCCATGAACAGTAGATTCTTTCTTAGTT TTTGATATAGATTTTATCGAATTGTGTGGTGTTTATGTAATTGTTTGGTTTGGGAGTTGT CAAAAGAAAGAAAGCAAGAACAAGTGTAACTGGAAGTCCATTTCTCTCTGATTTTAAAAT CACACGTAAAACTCTGACATGAAAAATCAACTTTTGATCCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)