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Oryza sativa
cluster # 2602 cluster # 2602       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2602#0 length = 1879 sequences # 2  

consensusID : consensus_2602#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1879
fasta sequence
                              [CCGCGCGCTCGCTAACCCTAGCCATGGCCGCACCACCATCCGACCACTAGCCGCGGCGGCCAGCGACGGCGAGGCCCCCCCACCCCGTCCTCCTCCTCCTCCTCATCCGCTTCTCTCCGGTCCGTCCCTTCGTTGACTGCCGCTCGGTTTGCTTCCGAGGGTTTTCCTCTCCCGCTGCTGCTGCGAGGGAGGGTCGATCCGTTCCTCCGCTGGGCGTGCCTGTGCGGGTGCTCCTCCTCCTGCTTCTTCCGCGGACTCCTCCTCCTCGAAGGTCCTTGTGAACTGAAGTAACCTCCACAGGAGTTCACATGTTCTAGAACACCAAGTGTCAGGGGAAAAACATTATGGATTACAGCAACAGTTCATGTTCTAGAACATGCAGTGGGCTTGTTAGGTTAAACAACACTATAGAGTCCAATGAGGTTCTGTTTTCTAAAACAAGAAGTGGGCTTGTTAGGATAAACAGCACTGTAGAGTCCAATGAGGTTTCGCTTTCTAAAACAAGAAGTGGGCTTATTAGGGGAAACACCAATGTGAGATCCAATGAAGGTTCATATTCTACAACACGAAGTGAGCTTGCTGGGGCAAATGGCGTTGTGGATTCCAACGTGGGAGATTTATGTTCTAAAACACGAAGTGGGCTTGTTAGAAGAAATGCCACTTTGGATTCCAATGAGGGATCATGTTCTAAAACACGAAGTGGGCTTGCTAGGGGAGATGGCATTGTGGGTTTAAATCAAGGTTCATCCTCTAAAACAAGAAGTGGGCTTGTTAGGGGAGGTGACATTATGAATTTCAGTGAAGGTTCATCC-TCTAAAACACGAAGTGGGCTTGTTAGGGGAAACACTACTGTGGCTGCCAGTAATGGTTCATATTCTGCAACTCCAAGCAGGTTTGTTAGAGGAAACATCATTGTGGGTTCCAAAGAGGGGTCATGTTCAAGAACAAGAAGTGGGCTTGTCAGAGAAAGCATCCAGATGGATTACAGTGACAGTTCATGCTCTAGAACTCGAAGTGGGCTTGTCAGAAGAAAGCCCTTTATGGTTCAAGTCAAGGATGAAGCTGCCATGAATGGGCTGTCTGATGACTGTTTGAAAGAGGACAGTCCAGGAAAGAATGAACCAAATCACAAGAGTAATCTGGTTGAAAATAGTGATAAACCAGTCATGAAGGGGCCTGATGGATGGTGGAAAGAAGGCATGCTAACAAAGAATGGGTCAAAGTACATGAGTGACCCGGTTCAAACCAAGGGTGAAGCATGCATCAATGGGCTTCCCGGTGGACAATGGAAAGAAAACAGTGCGGAAAAGAATGTATCAAATCACAAGAATGAGCTGGTTCAAAGAAAGGATGATCTAATTGTTGATGGGCTTCCTGATGGATGGTGGAAAGAGGACAGACCAAGGAAGAATGGATCAAATCTGAAGACTGATCCGTACTACATTGATCCAGTCAGTGGATATGAATTTCGCTCTCTGAAGGATGTGCACCGTTTTCTTAAATCAGGGGACATCTATAAATGCATTGTAAGGCCAAGAAAGAGAACTATCCAAGATCCTTGTACTATTGAAAACCAATCTCATGTGAGTTCCTTGCAGTTCTTCTTGGTTTGAGTTACTGGGGCATTTTGCTTCTTCTATCAGGACATTAAATAAACAAAAATACTAGGTATCTTAATTACCATGCACACCTCAAATTGAACATATTTGCTTTGGTTAAAATTTATAGAGTCCAGCCCTAGTAATTATATGTTTCTTGTAGCTCAGACATCAGCCACATGTGAAGTGTCAACTGCTCCTTGTCCTGGTTGCCCCTCTTTGCGTGCGTAAAGAATCAGAGTTTTCATGCACTATTACATCAGATAAAGAACTCTGATTCC]

[+] EMBL AK071442             [CCGCGCGCTCGCTAACCCTAGCCATGGCCGCACCACCATCCGACCACTAGCCGCGGCGGCCAGCGACGGCGAGGCCCCCCCACCCCGTCCTCCTCCTCCTCCTCATCCGCTTCTCTCCGGTCCGTCCCTTCGTTGACTGCCGCTCGGTTTGCTTCCGAGGGTTTTCCTCTCCCGCTGCTGCTGCGAGGGAGGGTCGATCCGTTCCTCCGCTGGGCGTGCCTGTGCGGGTGCTCCTCCTCCTGCTTCTTCCGCGGACTCCTCCTCCTCGAAGGTCCTTGTGAACTGAAGTAACCTCCACAGGAGTTCACATGTTCTAGAACACCAAGTGTCAGGGGAAAAACATTATGGATTACAGCAACAGTTCATGTTCTAGAACATGCAGTGGGCTTGTTAGGTTAAACAACACTATAGAGTCCAATGAGGTTCTGTTTTCTAAAACAAGAAGTGGGCTTGTTAGGATAAACAGCACTGTAGAGTCCAATGAGGTTTCGCTTTCTAAAACAAGAAGTGGGCTTATTAGGGGAAACACCAATGTGAGATCCAATGAAGGTTCATATTCTACAACACGAAGTGAGCTTGCTGGGGCAAATGGCGTTGTGGATTCCAACGTGGGAGATTTATGTTCTAAAACACGAAGTGGGCTTGTTAGAAGAAATGCCACTTTGGATTCCAATGAGGGATCATGTTCTAAAACACGAAGTGGGCTTGCTAGGGGAGATGGCATTGTGGGTTTAAATCAAGGTTCATCCTCTAAAACAAGAAGTGGGCTTGTTAGGGGAGGTGACATTATGAATTTCAGTGAAGGTTCATCC TCTAAAACACGAAGTGGGCTTGTTAGGGGAAACACTACTGTGGCTGCCAGTAATGGTTCATATTCTGCAACTCCAAGCAGGTTTGTTAGAGGAAACATCATTGTGGGTTCCAAAGAGGGGTCATGTTCAAGAACAAGAAGTGGGCTTGTCAGAGAAAGCATCCAGATGGATTACAGTGACAGTTCATGCTCTAGAACTCGAAGTGGGCTTGTCAGAAGAAAGCCCTTTATGGTTCAAGTCAAGGATGAAGCTGCCATGAATGGGCTGTCTGATGACTGTTTGAAAGAGGACAGTCCAGGAAAGAATGAACCAAATCACAAGAGTAATCTGGTTGAAAATAGTGATAAACCAGTCATGAAGGGGCCTGATGGATGGTGGAAAGAAGGCATGCTAACAAAGAATGGGTCAAAGTACATGAGTGACCCGGTTCAAACCAAGGGTGAAGCATGCATCAATGGGCTTCCCGGTGGACAATGGAAAGAAAACAGTGCGGAAAAGAATGTATCAAATCACAAGAATGAGCTGGTTCAAAGAAAGGATGATCTAATTGTTGATGGGCTTCCTGATGGATGGTGGAAAGAGGACAGACCAAGGAAGAATGGATCAAATCTGAAGACTGATCCGTACTACATTGATCCAGTCAGTGGATATGAATTTCGCTCTCTGAAGGATGTGCACCGTTTTCTTAAATCAGGGGACATCTATAAATGCATTGTAAGGCCAAGAAAGAGAACTATCCAAGATCCTTGTACTATTGAAAACCAATCTCATGTGAGTTCCTTGCAGTTCTTCTTGGTTTGAGTTACTGGGGCATTTTGCTTCTTCTATCAGGACATTAAATAAACAAAAATACTAGGTATCTTAATTACCATGCACACCTCAAATTGAACATATTTGCTTTGGTTAAAATTTATAGAGTCCAGCCCTAGTAATTATATGTTTCTTGTAGCTCAGACATCAGCCACATGTGAAGTGTCAACTGCTCCTTGTCCTGGTTGCCCCTCTTTGCGTGCGTAAAGAATCAGAGTTTTCATGCACTATTACATCAGATAAAGAACTCTGATTCC]
[+] EMBL CB676400             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATCCATCTAAAACACGAAGTGGGCTTGTTAGGGGAAACACTACTGTGGCTGCCAACCATGGTTCATATTCTGCAACTCCAAGCAGGTTTGTTAGAGGAAACATCATTGTGGGTTCCAAAGAGGGGTCATGTTCAAGAACAAGAAGTGGGCTTGTCAGAGAAAGCATCCAGATGGATTACAGTGACAGCTCATGCTCTACAACTCAAAGTGGGCTTGACAGAAGAAAGCCCTTTATGGTTCAAGTCAAGGATGAAGCTGCCATGAATGGGCTGTCTGATGACTGTTTGAAAGAGGACAGTCCATTAAAGAATGAACCAAATCACAAGAGTAATCTGGTTGAAAATACTGATAAACCAGTCATGAAGGGGCCTGATGGATGGTGGAAAGAAGGCATGCTAACAAAGAATGGGTCAAAGTACATGAGTGACCCGGTTCAAACCAAGGGTGAAGCATGCATCAATGGGCTTCCCGGTGGACAATGGAAAGAAAACAGTGCGGAAAAGAATGTATCAAATCACAAGAATGAGCTGGTTCAAACAAAGGATGATCTAATTGTTGATGGGCTTCCTGATGGATGGTGGAAAGAGGACAGACCAAGGAAGAATGGATCAAATCTGAAGACTGATCCGTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_2602#0 CCGCGCGCTCGCTAACCCTAGCCATGGCCGCACCACCATCCGACCACTAGCCGCGGCGGC CAGCGACGGCGAGGCCCCCCCACCCCGTCCTCCTCCTCCTCCTCATCCGCTTCTCTCCGG TCCGTCCCTTCGTTGACTGCCGCTCGGTTTGCTTCCGAGGGTTTTCCTCTCCCGCTGCTG CTGCGAGGGAGGGTCGATCCGTTCCTCCGCTGGGCGTGCCTGTGCGGGTGCTCCTCCTCC TGCTTCTTCCGCGGACTCCTCCTCCTCGAAGGTCCTTGTGAACTGAAGTAACCTCCACAG GAGTTCACATGTTCTAGAACACCAAGTGTCAGGGGAAAAACATTATGGATTACAGCAACA GTTCATGTTCTAGAACATGCAGTGGGCTTGTTAGGTTAAACAACACTATAGAGTCCAATG AGGTTCTGTTTTCTAAAACAAGAAGTGGGCTTGTTAGGATAAACAGCACTGTAGAGTCCA ATGAGGTTTCGCTTTCTAAAACAAGAAGTGGGCTTATTAGGGGAAACACCAATGTGAGAT CCAATGAAGGTTCATATTCTACAACACGAAGTGAGCTTGCTGGGGCAAATGGCGTTGTGG ATTCCAACGTGGGAGATTTATGTTCTAAAACACGAAGTGGGCTTGTTAGAAGAAATGCCA CTTTGGATTCCAATGAGGGATCATGTTCTAAAACACGAAGTGGGCTTGCTAGGGGAGATG GCATTGTGGGTTTAAATCAAGGTTCATCCTCTAAAACAAGAAGTGGGCTTGTTAGGGGAG GTGACATTATGAATTTCAGTGAAGGTTCATCCTCTAAAACACGAAGTGGGCTTGTTAGGG GAAACACTACTGTGGCTGCCAGTAATGGTTCATATTCTGCAACTCCAAGCAGGTTTGTTA GAGGAAACATCATTGTGGGTTCCAAAGAGGGGTCATGTTCAAGAACAAGAAGTGGGCTTG TCAGAGAAAGCATCCAGATGGATTACAGTGACAGTTCATGCTCTAGAACTCGAAGTGGGC TTGTCAGAAGAAAGCCCTTTATGGTTCAAGTCAAGGATGAAGCTGCCATGAATGGGCTGT CTGATGACTGTTTGAAAGAGGACAGTCCAGGAAAGAATGAACCAAATCACAAGAGTAATC TGGTTGAAAATAGTGATAAACCAGTCATGAAGGGGCCTGATGGATGGTGGAAAGAAGGCA TGCTAACAAAGAATGGGTCAAAGTACATGAGTGACCCGGTTCAAACCAAGGGTGAAGCAT GCATCAATGGGCTTCCCGGTGGACAATGGAAAGAAAACAGTGCGGAAAAGAATGTATCAA ATCACAAGAATGAGCTGGTTCAAAGAAAGGATGATCTAATTGTTGATGGGCTTCCTGATG GATGGTGGAAAGAGGACAGACCAAGGAAGAATGGATCAAATCTGAAGACTGATCCGTACT ACATTGATCCAGTCAGTGGATATGAATTTCGCTCTCTGAAGGATGTGCACCGTTTTCTTA AATCAGGGGACATCTATAAATGCATTGTAAGGCCAAGAAAGAGAACTATCCAAGATCCTT GTACTATTGAAAACCAATCTCATGTGAGTTCCTTGCAGTTCTTCTTGGTTTGAGTTACTG GGGCATTTTGCTTCTTCTATCAGGACATTAAATAAACAAAAATACTAGGTATCTTAATTA CCATGCACACCTCAAATTGAACATATTTGCTTTGGTTAAAATTTATAGAGTCCAGCCCTA GTAATTATATGTTTCTTGTAGCTCAGACATCAGCCACATGTGAAGTGTCAACTGCTCCTT GTCCTGGTTGCCCCTCTTTGCGTGCGTAAAGAATCAGAGTTTTCATGCACTATTACATCA GATAAAGAACTCTGATTCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)