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Oryza sativa
cluster # 2606 cluster # 2606       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2606#0 length = 2174 sequences # 1  
consensus_2606#1 length = 1699 sequences # 1  

consensusID : consensus_2606#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2174
fasta sequence
                              [CCCCACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCCCTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGGCGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCGCATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGTGTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCAGAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCCCACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCACCCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTCCCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTCGTTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGCTCCCGTCCTTCGACTACGCCGCCGCGCTCGAGCGCGCCGTGCGCTCCTCGCCCTCGCTGTCCTCCGCCGCGAGCGAGAGGACGGAGGTGATCCTCTCCCAATCCCGGTTCCTCCTCCGCTGCGCCTCCAAGTGGTCGCTCACCACGGGGCGGTTCCCTCTCCCCCTCATCGCCGCCCTCGTCGCGTTCGCCGCGGAGGCGAACGGGGTCACCTCCATCACCGTGGAGGACATTGCGCGGGACATCTCTGCGAGGCTGCACACCAGCCTCCGCCGGTACAAGGAGCTCGTCGATGCGCTGGTGCGCGTCGCGCGGGAGCTGCTGCCGTGGGGCGCCGATGTCAATGCGAAGAACTTGCTCCTGAACGCACCCGTGCTGCTCCGGCTCATGGAGATGAGGTCACAGTCCGACCCATCAGAGCAGTTTCTCGAGAGCTTCGCTCCGGACATTGCCGGGATTGTGCAGGCGTGCTCAGCCGTTGATGATGATGAATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTCCGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGCTTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGGTGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCTGGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTTTGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACGGATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAATAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAAGAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAATAGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGGTATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGAGATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGCCAGTGGACACAAATGAAAACATGGTGATGTAAGTCCATAGGTCTTTAGGATAATTAAGACAGATTTATTGCTGAACATAGGTTCTCACTACTATAAACCACAACAATCTGTTGATAGAATTTTTTTTTCTTGATAGAGAAATTTTGTGCTGAGTACCACTTTGGTGAAGTTCAATTAAGCTGATTGTGGAAAGAAAATATTGTGATAGAGATGAAAATACATGTTTGGGTTTTGTTTTCCCTGGTAAAACAGACAGTAGAATGCAACCTAGGAATGATTGGGAGACTAGAATTTTTTGTCTTAAATGACTGGGATGTTCTGGTTACTGTACATTGATGTACTGCTTATGAGTGACTTGTAGTTATAAATTTTCA]

[+] EMBL AK071880             [CCCCACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCCCTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGGCGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCGCATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGTGTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCAGAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCCCACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCACCCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTCCCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTCGTTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGCTCCCGTCCTTCGACTACGCCGCCGCGCTCGAGCGCGCCGTGCGCTCCTCGCCCTCGCTGTCCTCCGCCGCGAGCGAGAGGACGGAGGTGATCCTCTCCCAATCCCGGTTCCTCCTCCGCTGCGCCTCCAAGTGGTCGCTCACCACGGGGCGGTTCCCTCTCCCCCTCATCGCCGCCCTCGTCGCGTTCGCCGCGGAGGCGAACGGGGTCACCTCCATCACCGTGGAGGACATTGCGCGGGACATCTCTGCGAGGCTGCACACCAGCCTCCGCCGGTACAAGGAGCTCGTCGATGCGCTGGTGCGCGTCGCGCGGGAGCTGCTGCCGTGGGGCGCCGATGTCAATGCGAAGAACTTGCTCCTGAACGCACCCGTGCTGCTCCGGCTCATGGAGATGAGGTCACAGTCCGACCCATCAGAGCAGTTTCTCGAGAGCTTCGCTCCGGACATTGCCGGGATTGTGCAGGCGTGCTCAGCCGTTGATGATGATGAATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTCCGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGCTTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGGTGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCTGGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTTTGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACGGATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAATAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAAGAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAATAGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGGTATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGAGATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGCCAGTGGACACAAATGAAAACATGGTGATGTAAGTCCATAGGTCTTTAGGATAATTAAGACAGATTTATTGCTGAACATAGGTTCTCACTACTATAAACCACAACAATCTGTTGATAGAATTTTTTTTTCTTGATAGAGAAATTTTGTGCTGAGTACCACTTTGGTGAAGTTCAATTAAGCTGATTGTGGAAAGAAAATATTGTGATAGAGATGAAAATACATGTTTGGGTTTTGTTTTCCCTGGTAAAACAGACAGTAGAATGCAACCTAGGAATGATTGGGAGACTAGAATTTTTTGTCTTAAATGACTGGGATGTTCTGGTTACTGTACATTGATGTACTGCTTATGAGTGACTTGTAGTTATAAATTTTCA]


>consensus_2606#0 CCCCACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCC CTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGG CGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCG CATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGT GTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCA GAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCC CACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCAC CCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTC CCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTC GTTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGCTCCCGTCCTT CGACTACGCCGCCGCGCTCGAGCGCGCCGTGCGCTCCTCGCCCTCGCTGTCCTCCGCCGC GAGCGAGAGGACGGAGGTGATCCTCTCCCAATCCCGGTTCCTCCTCCGCTGCGCCTCCAA GTGGTCGCTCACCACGGGGCGGTTCCCTCTCCCCCTCATCGCCGCCCTCGTCGCGTTCGC CGCGGAGGCGAACGGGGTCACCTCCATCACCGTGGAGGACATTGCGCGGGACATCTCTGC GAGGCTGCACACCAGCCTCCGCCGGTACAAGGAGCTCGTCGATGCGCTGGTGCGCGTCGC GCGGGAGCTGCTGCCGTGGGGCGCCGATGTCAATGCGAAGAACTTGCTCCTGAACGCACC CGTGCTGCTCCGGCTCATGGAGATGAGGTCACAGTCCGACCCATCAGAGCAGTTTCTCGA GAGCTTCGCTCCGGACATTGCCGGGATTGTGCAGGCGTGCTCAGCCGTTGATGATGATGA ATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTC CGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGC TTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGG TGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCT GGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTT TGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACG GATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAA TAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAA GAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAAT AGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGG TATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGA GATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGC CAGTGGACACAAATGAAAACATGGTGATGTAAGTCCATAGGTCTTTAGGATAATTAAGAC AGATTTATTGCTGAACATAGGTTCTCACTACTATAAACCACAACAATCTGTTGATAGAAT TTTTTTTTCTTGATAGAGAAATTTTGTGCTGAGTACCACTTTGGTGAAGTTCAATTAAGC TGATTGTGGAAAGAAAATATTGTGATAGAGATGAAAATACATGTTTGGGTTTTGTTTTCC CTGGTAAAACAGACAGTAGAATGCAACCTAGGAATGATTGGGAGACTAGAATTTTTTGTC TTAAATGACTGGGATGTTCTGGTTACTGTACATTGATGTACTGCTTATGAGTGACTTGTA GTTATAAATTTTCA



consensusID : consensus_2606#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1699
fasta sequence
                              [ACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCCCTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGGCGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCGCATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGTGTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCAGAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCCCACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCACCCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTCCCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTCGCTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGTTGATGATGATGAATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTCCGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGCTTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGGTGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCTGGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTTTGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACGGATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAATAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAAGAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAATAGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGGTATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGAGATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGCCAGTGGACACAAATGAAAACATGGTGATTTTCTCATAGATGGAGTCAGAAAATGAAAAATGTGCATTGGCGTATCGTGCTTTCCTGATGAAGTGTGTTTCTGATTATTTCGAAGTGGTTCAGATCTTCAGGATGCAATCTTTCTTTTTTAAGGTAATGGGTGGCTACTGACTACATATATGTGACTCAAATTACTATTGGTGATATATCTATCCTATTCCTATGGGCGAAAATAACATTTGGTTTGTAATCGTGCAAAATGTGGATAAGTATTTACATGTTTATTTGTAATCTATGTTGTTCAGCGGTTCTTGTTGCTAAAGGCCGCAAGGACAGACTACCGATTTAAGTTACCAGGTCATGTGCAATTTTTTTTAAGATG]

[+] EMBL AK105272             [ACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCCCTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGGCGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCGCATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGTGTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCAGAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCCCACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCACCCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTCCCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTCGCTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGTTGATGATGATGAATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTCCGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGCTTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGGTGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCTGGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTTTGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACGGATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAATAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAAGAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAATAGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGGTATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGAGATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGCCAGTGGACACAAATGAAAACATGGTGATTTTCTCATAGATGGAGTCAGAAAATGAAAAATGTGCATTGGCGTATCGTGCTTTCCTGATGAAGTGTGTTTCTGATTATTTCGAAGTGGTTCAGATCTTCAGGATGCAATCTTTCTTTTTTAAGGTAATGGGTGGCTACTGACTACATATATGTGACTCAAATTACTATTGGTGATATATCTATCCTATTCCTATGGGCGAAAATAACATTTGGTTTGTAATCGTGCAAAATGTGGATAAGTATTTACATGTTTATTTGTAATCTATGTTGTTCAGCGGTTCTTGTTGCTAAAGGCCGCAAGGACAGACTACCGATTTAAGTTACCAGGTCATGTGCAATTTTTTTTAAGATG]


>consensus_2606#1 ACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCCCTCG CACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGGCGAG GGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCGCATC CACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGTGTAC GACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCAGAAG CTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCCCACC GCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCACCCAG GGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTCCCAC CGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTCGCTC GCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGTTGATGATGATGAAT CCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTCCG GGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGCTT ACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGGTG CTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCTGG ATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTTTG ATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACGGA TTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAATA AATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAAGA AGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAATAG AGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGGTA TTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGAGA TCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGCCA GTGGACACAAATGAAAACATGGTGATTTTCTCATAGATGGAGTCAGAAAATGAAAAATGT GCATTGGCGTATCGTGCTTTCCTGATGAAGTGTGTTTCTGATTATTTCGAAGTGGTTCAG ATCTTCAGGATGCAATCTTTCTTTTTTAAGGTAATGGGTGGCTACTGACTACATATATGT GACTCAAATTACTATTGGTGATATATCTATCCTATTCCTATGGGCGAAAATAACATTTGG TTTGTAATCGTGCAAAATGTGGATAAGTATTTACATGTTTATTTGTAATCTATGTTGTTC AGCGGTTCTTGTTGCTAAAGGCCGCAAGGACAGACTACCGATTTAAGTTACCAGGTCATG TGCAATTTTTTTTAAGATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2606#0      CCCCACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCC 60
consensus_2606#1      ----ACCATCCAATTTCGTTTTCGTTTTCGTTTCTTCCGCCGCAAGCCTCGCCGCCCGCC 56
                          ********************************************************

consensus_2606#0      CTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGG 120
consensus_2606#1      CTCGCACCGGCGGCCGCCGCCGCCGCGGCGCGCGATGGAGTCGACGTGCTGGTCGTGCGG 116
                      ************************************************************

consensus_2606#0      CGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCG 180
consensus_2606#1      CGAGGGCGCGGTGGTGGCGGACCCGGACACCGGTGTGCTCGTCTGCACCTCCTGCGGCCG 176
                      ************************************************************

consensus_2606#0      CATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGT 240
consensus_2606#1      CATCCACGACTCCGGCTCGTCGGAGTTCGTCCACCAGTCGATCTGCACCGACAACGGCGT 236
                      ************************************************************

consensus_2606#0      GTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCA 300
consensus_2606#1      GTACGACCTCCGCGCCTCCTCCTTCGTCTACCACCAGTCGCAGTCGCAGTACCGGGACCA 296
                      ************************************************************

consensus_2606#0      GAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCC 360
consensus_2606#1      GAAGCTCTCGAACGGCGTCGTCACCATCGCCTCCATCGCCGCCCGCCTCGGCCTCTCCCC 356
                      ************************************************************

consensus_2606#0      CACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCAC 420
consensus_2606#1      CACCGCCGCCGACGAGGCGCTCGCCATGGCCAAGTCCGCCACGGGCGGCAACCTCGCCAC 416
                      ************************************************************

consensus_2606#0      CCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTC 480
consensus_2606#1      CCAGGGCTCCGCCTTCCTCCCGGCCCTCGCCTCCGCCTGCGCCTTCCTCGTCGCGAGGTC 476
                      ************************************************************

consensus_2606#0      CCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTC 540
consensus_2606#1      CCACCGCCTCCCGCTCTCCCTGGCCGAGGCCGCCGAGACCGCCTTCTGCTCGGTGGCCTC 536
                      ************************************************************

consensus_2606#0      GTTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCGCTCCCGTCCTT 600
consensus_2606#1      GCTCGCCGACCTCGTCTCCCGCATCGCCTCCCACCTCTCGCTCCCCCCG----------- 585
                      * ***********************************************           

consensus_2606#0      CGACTACGCCGCCGCGCTCGAGCGCGCCGTGCGCTCCTCGCCCTCGCTGTCCTCCGCCGC 660
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      GAGCGAGAGGACGGAGGTGATCCTCTCCCAATCCCGGTTCCTCCTCCGCTGCGCCTCCAA 720
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      GTGGTCGCTCACCACGGGGCGGTTCCCTCTCCCCCTCATCGCCGCCCTCGTCGCGTTCGC 780
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      CGCGGAGGCGAACGGGGTCACCTCCATCACCGTGGAGGACATTGCGCGGGACATCTCTGC 840
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      GAGGCTGCACACCAGCCTCCGCCGGTACAAGGAGCTCGTCGATGCGCTGGTGCGCGTCGC 900
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      GCGGGAGCTGCTGCCGTGGGGCGCCGATGTCAATGCGAAGAACTTGCTCCTGAACGCACC 960
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      CGTGCTGCTCCGGCTCATGGAGATGAGGTCACAGTCCGACCCATCAGAGCAGTTTCTCGA 1020
consensus_2606#1      ------------------------------------------------------------
                                                                                  

consensus_2606#0      GAGCTTCGCTCCGGACATTGCCGGGATTGTGCAGGCGTGCTCAGCCGTTGATGATGATGA 1080
consensus_2606#1      -----------------------------------------------TTGATGATGATGA 598
                                                                     *************

consensus_2606#0      ATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTC 1140
consensus_2606#1      ATCCAAGTACCTTCAGGTTGCTCCCCAATTGGCTTCTGATGATTTGGATTCCAATAATTC 658
                      ************************************************************

consensus_2606#0      CGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGC 1200
consensus_2606#1      CGGGCAGGAGGGGAAGGAATTGGAGAATTTTAAGATCTCGGAGGAGTGCCTATCAAGTGC 718
                      ************************************************************

consensus_2606#0      TTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGG 1260
consensus_2606#1      TTACCAAAATGTCTTGAAGAGGCTTGCTCAACTACAAAGACTTGGGCAAGTTGGTAAAGG 778
                      ************************************************************

consensus_2606#0      TGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCT 1320
consensus_2606#1      TGCTAACAGGAAGAGGCAGCGGATAGGAGGGCTGGAGCTGGAGCCATGTATAGATTCGCT 838
                      ************************************************************

consensus_2606#0      GGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTT 1380
consensus_2606#1      GGATGATGGTTGGACCAAGGACATGGTGTTGGAGGATGTAGTGAATATTGACGTCGGCTT 898
                      ************************************************************

consensus_2606#0      TGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACG 1440
consensus_2606#1      TGATGTTCCTCCGCCATCGTTTGCTGCTGGAATGAAGTTGCAGAAGAAAAGGAGAGCACG 958
                      ************************************************************

consensus_2606#0      GATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAA 1500
consensus_2606#1      GATTGAAGCTGCTAAGTGCCGAATTGATGCGATTAGAAAAGGTCCTGTTGAGAGCGAGAA 1018
                      ************************************************************

consensus_2606#0      TAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAA 1560
consensus_2606#1      TAAATTGCAGGCTGCTCTGAGAAATGAAGATGCCTGCTCACCGCAAAAACCGGCCAGGAA 1078
                      ************************************************************

consensus_2606#0      GAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAAT 1620
consensus_2606#1      GAAGCGAGGCAAAAAGAGGATAGCTGGAAGTGATCGTGCCATGAATGGAGAGCTTCCAAT 1138
                      ************************************************************

consensus_2606#0      AGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGG 1680
consensus_2606#1      AGAGATGCCGGATGGTCCAGGTGGTGAGAAGAAGAGACGGAAAGGAGCTCCCTCTGATGG 1198
                      ************************************************************

consensus_2606#0      TATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGA 1740
consensus_2606#1      TATTGACTGGGAGGACTGTATCATTGAGCTCCTGTTATTACACGGCGCAAATGAGGAAGA 1258
                      ************************************************************

consensus_2606#0      GATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGC 1800
consensus_2606#1      GATCGAACAAGGACAATACAGAAGATTGTTAGATCTACATGTCTTCTGTGCAGTGAGTGC 1318
                      ************************************************************

consensus_2606#0      CAGTGGACACAAATGAAAACATGGTGATGTAAGTCCATAGGTCTTTAGGATAATTAAGAC 1860
consensus_2606#1      CAGTGGACACAAATGAAAACATGGTGATTTTCTCATAGATGGAGTCAGAAAATGAAAAAT 1378
                      **************************** *      * * *   * ** * *   ** * 

consensus_2606#0      A----------------GATTTATTGCTGAACATAGGTTCTCACTACTATAAACCACAAC 1904
consensus_2606#1      GTGCATTGGCGTATCGTGCTTTCCTGATGAAGTGTGTTTCTGATTATTTCGAAGTGGTTC 1438
                                       * ***  ** ****    * **** * ** *   **      *

consensus_2606#0      AATCTGTT--GATAGAATTTTTTTTTCTTGATAGAGAAATTTTGTGCTGAGTACCACTTT 1962
consensus_2606#1      AGATCTTCAGGATGCAATCTTTCTTTTTTAAGGTAATGGGTGGCTACTGA---CTACATA 1495
                      *     *   ***  *** *** *** ** *   *     *   * ****   * ** * 

consensus_2606#0      GGTGAAGTTCAATTAAGCTGATTGTGGAAAGAAAATATTGTGA-TAGAGATGAAAATACA 2021
consensus_2606#1      TATGTGACTCAAATTA-CTATTGGTGATATATCTATCCTATTCCTATGGGCGAAAATA-A 1553
                        **    **** * * **  * ***  *     **  * *   **  *  ******* *

consensus_2606#0      TGTTTGGGTTTTGTTT-TCCCTGGTA-AAACAGACAGTAGAATGCAACCTAGGAATGATT 2079
consensus_2606#1      CATTTGGTTTGTAATCGTGCAAAATGTGGATAAGTATTTACATGTTTATTTGTAATCTAT 1613
                        ***** ** *  *  * *    *    * *   * *   ***     * * ***   *

consensus_2606#0      GGGAGACTAGAATTTTTTGTCTTAAATGACTGGGATGTTCTGGTTACTGTACATTGATGT 2139
consensus_2606#1      GTT-GTTCAGCGGTTCTTGTTGCTAAAGGCCGCAAGGA-CAGACTACCG-ATTTAAGTTA 1670
                      *   *   **   ** ****    ** * * *  * *  * *  *** * *  *   *  

consensus_2606#0      ACTGCTTATGAGTGACTTGTAGTTATAAATTTTCA 2174
consensus_2606#1      CCAGGTCATGTGCAATTTTTTTTAAGATG------ 1699
                       * * * *** *  * ** *  * * *        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)