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Oryza sativa
cluster # 2619 cluster # 2619       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2619#0 length = 1017 sequences # 2  

consensusID : consensus_2619#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1017
fasta sequence
                              [CGCTCGAACTGCGAGCGCCATGGCTCATCTCGCCACCGTCGTGCTCCTGCTCGTCGCGGCCGCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTGCGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGGCGGAGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTCGTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTCCAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCACATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCTCAATGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGCTGAAGTAATGGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAACAATGAACACTGACAAGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGGTGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGGGTGGACTATCTATCAGTTGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGAAATTGTAACTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTTACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGTGCATCCTTATAAAATGATCGCGTCATTGAGGATTTGAGGTACTGTACCAGCTGAAGAGACCGCTGTAATGTAGGATTTGGCTTTCAATGATCATGTACCTTCAAAACAGTGTTCTTTTTCATGTACGTGTTCTTTGCTCTTCCATTTCTCTTTATCAATTCAACACTTGTGATTTTTTTATATATATCATATCTCT]

[+] EMBL AK108500             [CGCTCGAACTGCGAGCGCCATGGCTCATCTCGCCACCGTCGTGCTCCTGCTCGTCGCGGCCGCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTGCGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGGCGGAGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTCGTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTCCAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCACATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCTCAATGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGCTGAAGTAATGGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAACAATGAACACTGACAAGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGGTGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGGGTGGACTATCTATCAGTTGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGAAATTGTAACTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTTACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGTGCATCCTTATAAAATGATCGCGTCATTGAGGATTTGAGGTACTGTACCAGCTGAAGAGACCGCTGTAATGTAGGATTTGGCTTTCAATGATCATGTACCTTCAAAACAGTGTTCTTTTTCATGTACGTGTTCTTTGCTCTTCCATTTCTCTTTATCAATTCAACACTTGTGATTTTTTTATATATATCATATCTCT]
[+] EMBL CB677148             [                                                             GCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTGCGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGGCGGAGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTCGTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTCCAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCACATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCTCAATGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGCTGAAGTAATGGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAACAATGAACACTGACAAGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGGTGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGGGTGGACTATCTATCAGTTGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGAAATTGTAATTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTTACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGT                                                                                                                                                                                                    ]


>consensus_2619#0 CGCTCGAACTGCGAGCGCCATGGCTCATCTCGCCACCGTCGTGCTCCTGCTCGTCGCGGC CGCGCGCCAAGCTCCCCTCGCCGCCGGCGACCACTCGGCGAACCCTCGCCTCCCCACCTG CGCAGCCGCACCGGATGTGGCTGCGCCGCAGGAGCACGGCGACGGCGGCGGCGTCGGCGG AGGGAGGCGGATCCTGGACATCACGCACGCGGTGCGGGCGGAGCTCCCGGTTCTGGGTTC GTGCGACGGGGTGGGCGCGCTGGTGCGGCTGAAGAAGTCCATGGCGAACGGCTCGCGCTC CAACCTCTCGGAGCTCCGGATGAGCGTGCACACGGGCACCCACGTCGACGCCCCCGGCCA CATGTGGCAGCCGCACTTCGACGCCGGCCTCGACGTCGACACCCTCGACCTCGGCCTCCT CAATGGTCCTGCATTGCTGGTTGATGTCCCGAGACACTCAAACGTAACTGCTGAAGTAAT GGAGTCCCTGAACATCCCAAGAGGAGTTCGTCGAGTTCTTTTCAGAACAATGAACACTGA CAAGAGACTGATGTGGCAAAAGGAGAGTGATCTGAGTTTTGTTGGATTTACAGAGGATGG TGCGCAATGGTTGGTTGGTTACACTGATATTAAGCTAGTCGGGGTGGACTATCTATCAGT TGCTTCGTATGAACACATGATTCCTGCACATGTAGTGTTTTTGAAAAGTAAGGAAATTGT AACTGTCGAAGCTCTGAAGTTAGATGATGTGGAACCTGGCATGTACATGTTACATTGCTT ACCTCTAAGGCTGGCTGGAGCTGAGGGTTCACCCGTTAGGTGCATCCTTATAAAATGATC GCGTCATTGAGGATTTGAGGTACTGTACCAGCTGAAGAGACCGCTGTAATGTAGGATTTG GCTTTCAATGATCATGTACCTTCAAAACAGTGTTCTTTTTCATGTACGTGTTCTTTGCTC TTCCATTTCTCTTTATCAATTCAACACTTGTGATTTTTTTATATATATCATATCTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)