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Oryza sativa
cluster # 2627 cluster # 2627       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2627#0 length = 2251 sequences # 2  

consensusID : consensus_2627#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2251
fasta sequence
                              [GTTGGCCACGCGATTTCTCAGGCGCACCTCCGCCGCAACGCGAGTCCCCCCACCGCCGCCGGCCGCGGCGCGCCGCCGTTCTGACGCTCCACGGCCACATGAACTGCCGCCACCTCGCCCTCCGGCTCCGCCACCTCCGCCGCCTTCTCGCGGTCGCACCCCTTTCCTCGCTCGCGGCCGCGCACTCCGCTAACCGCTCCTCCCCACGGCTAAACCCCACTTCGGTGCCGCCACCGCCGCGGCAGCTGCATCTCCCGACCCTCCAGGCTCGACGGCTCTGCTCCACCACGCACGTCGTCCTCCCCACAAACCTCCAGGACGAGCGGTTCGCGGCTCTCTCGGATAGGATCTACGACGCCGTGATTGAGACCGCGGCGGGTTCCAGCGAGGGCACGGAGGCGGCCCTTGACGCGCTGGGCGCCGAGCTGACCACCCCGCTCGTCGCCGACGTGCTGCATCGCCTCCGTTACGACGAGAAGCTGGCCTTCCGGTTCTTCGTCTGGGCGTCTCACCAGGACGGCTACGAGCACGAGGCCGCGACGTACAACGACGTCATCGACATCCTCTCCGGCACGCGGTACAAGGCCCGCCAGTTCGGCGTCCTCTGCGACGTGCTCGACCACATGAAGCGCCGCCGCACAAGGTCCGTGCCGGTCGACGACTTGCTGGGTATCCTGCGCGCATACACGGAGAAGCACCTCACGCATCTCAGGAAGCTGGCTAAGAAGCGGCGGGTGCGGATGCGCACGCCGCCGGAGACCGACGCTCTGAACGTGCTGCTGGACGCCTTCTGCAAGTGCGGGATGGTCCGGGAGGCGGAGGTGGTGTTCAGCCGCGTGAAGAGGAAGCTGCTGGGGAATGCCGAGACATACAGTATCCTGTTCTTCGGGTGGTGCCGGGCAAGGGACCCCAAGAGGGCCATGAAGGTGCTCGAGGAAATGATTCAGATGAAGCACACCCCTGAGAACTTCACTTACAATGCTGCCATTGACTCATTTTGCAGTGCTGGTTTGGTCTCAGAGGCAAGGGATTTGTTTGAGTTCATGAGAACAGAGGGGTCTACAATTTCATCGCCCACGGCTAAGACATACTCGATTATGATTGCGGCGCTAGCAAAGGCTGGTCAGATGGAGGAGTGCTTTGAACTGATTTCAGAAATGAGAAAGTGCGGCTGTATGCCTGATGTGTCGACATATAAAGACTTGATTGAAGGCATGTTGTTGGTGGATAAACTGGATGCTGCTTATTGTGTTTTAGATGAGATGGCAAAGGCTGGCTTTCCCCCTGACATTGTCACTTACAATTGCTTTCTGAAGGTGCTTTGTGGTCTTCAAAAGGCTGATGACGCGCTTGAACTCTGTGAAAGGATGATAGAGGCGCATTGTGAGCCTAGTGTTCATACATATAATATGCTAATGGTGATGTTCTTTGAGATGAGAGAGCCAGATAGGGCAATCAATATTTGGATCGAGATGGACAAGAGAGGATGCCATCGCGCTGTTGATACCTACGAAACAATGATTGATGGGCTGTTTGATTCTGGAAGAACGGAAGATGCGACCGCTCTTCTAGATGAGGTAATAAACCGTGGCATGAAACTTTCGTACAAGAAGTTTGATGCTATCATGTTGCGGCTATCAGCTGTAGGCAACCTTGGCGCGATACATCGGTTGTCAGAGCATATGAGGAGATTTTACAATGTTGCAATGTCTAGGCGTTTTGCAATCACACAGAAGAAGAAGAGCATAGGTCTGAGAAGGAAATGAATATTTCGAGATTTCTTGTTAGTGCAGATGATCAGGAGTTTATATGAGGTTAGCTAATTATTGGTTTATTATTGCAGCAATTGGTTGTCACTTGCAAATGTATTAAAATATTTCCTGGGTCCTATATAGGTTCAGTGTTATTTTACCAATTTGTCTAGGAGTAAGTTGCATCTGTGAAATGCTTTGACTGCTGGTTGCATACTTGAATAGAAACTTGCATGTAGCTAATAGCAACACAACATCACTCTTATGTACCTTCAACATAGAAAAGCACAATTAGTTACATTTTTGGTAGCTCCAACACTTTGCAGTGTGTTTGTTTCGTGCAATCAGCATAATAATGGCTAAATTGGCGAAGCAAACAAAAATATTTCAATCAATTGTTCTTATCTTACCTGCATTTCCTGGTAGCATTTGTTTGGCAAGTGGCAACCCTCACATGTAGACCTTATGATTTCCTTAGTTCTGCAGGAAGGATATGATCC]

[+] EMBL AK072404             [GTTGGCCACGCGATTTCTCAGGCGCACCTCCGCCGCAACGCGAGTCCCCCCACCGCCGCCGGCCGCGGCGCGCCGCCGTTCTGACGCTCCACGGCCACATGAACTGCCGCCACCTCGCCCTCCGGCTCCGCCACCTCCGCCGCCTTCTCGCGGTCGCACCCCTTTCCTCGCTCGCGGCCGCGCACTCCGCTAACCGCTCCTCCCCACGGCTAAACCCCACTTCGGTGCCGCCACCGCCGCGGCAGCTGCATCTCCCGACCCTCCAGGCTCGACGGCTCTGCTCCACCACGCACGTCGTCCTCCCCACAAACCTCCAGGACGAGCGGTTCGCGGCTCTCTCGGATAGGATCTACGACGCCGTGATTGAGACCGCGGCGGGTTCCAGCGAGGGCACGGAGGCGGCCCTTGACGCGCTGGGCGCCGAGCTGACCACCCCGCTCGTCGCCGACGTGCTGCATCGCCTCCGTTACGACGAGAAGCTGGCCTTCCGGTTCTTCGTCTGGGCGTCTCACCAGGACGGCTACGAGCACGAGGCCGCGACGTACAACGACGTCATCGACATCCTCTCCGGCACGCGGTACAAGGCCCGCCAGTTCGGCGTCCTCTGCGACGTGCTCGACCACATGAAGCGCCGCCGCACAAGGTCCGTGCCGGTCGACGACTTGCTGGGTATCCTGCGCGCATACACGGAGAAGCACCTCACGCATCTCAGGAAGCTGGCTAAGAAGCGGCGGGTGCGGATGCGCACGCCGCCGGAGACCGACGCTCTGAACGTGCTGCTGGACGCCTTCTGCAAGTGCGGGATGGTCCGGGAGGCGGAGGTGGTGTTCAGCCGCGTGAAGAGGAAGCTGCTGGGGAATGCCGAGACATACAGTATCCTGTTCTTCGGGTGGTGCCGGGCAAGGGACCCCAAGAGGGCCATGAAGGTGCTCGAGGAAATGATTCAGATGAAGCACACCCCTGAGAACTTCACTTACAATGCTGCCATTGACTCATTTTGCAGTGCTGGTTTGGTCTCAGAGGCAAGGGATTTGTTTGAGTTCATGAGAACAGAGGGGTCTACAATTTCATCGCCCACGGCTAAGACATACTCGATTATGATTGCGGCGCTAGCAAAGGCTGGTCAGATGGAGGAGTGCTTTGAACTGATTTCAGAAATGAGAAAGTGCGGCTGTATGCCTGATGTGTCGACATATAAAGACTTGATTGAAGGCATGTTGTTGGTGGATAAACTGGATGCTGCTTATTGTGTTTTAGATGAGATGGCAAAGGCTGGCTTTCCCCCTGACATTGTCACTTACAATTGCTTTCTGAAGGTGCTTTGTGGTCTTCAAAAGGCTGATGACGCGCTTGAACTCTGTGAAAGGATGATAGAGGCGCATTGTGAGCCTAGTGTTCATACATATAATATGCTAATGGTGATGTTCTTTGAGATGAGAGAGCCAGATAGGGCAATCAATATTTGGATCGAGATGGACAAGAGAGGATGCCATCGCGCTGTTGATACCTACGAAACAATGATTGATGGGCTGTTTGATTCTGGAAGAACGGAAGATGCGACCGCTCTTCTAGATGAGGTAATAAACCGTGGCATGAAACTTTCGTACAAGAAGTTTGATGCTATCATGTTGCGGCTATCAGCTGTAGGCAACCTTGGCGCGATACATCGGTTGTCAGAGCATATGAGGAGATTTTACAATGTTGCAATGTCTAGGCGTTTTGCAATCACACAGAAGAAGAAGAGCATAGGTCTGAGAAGGAAATGAATATTTCGAGATTTCTTGTTAGTGCAGATGATCAGGAGTTTATATGAGGTTAGCTAATTATTGGTTTATTATTGCAGCAATTGGTTGTCACTTGCAAATGTATTAAAATATTTCCTGGGTCCTATATAGGTTCAGTGTTATTTTACCAATTTGTCTAGGAGTAAGTTGCATCTGTGAAATGCTTTGACTGCTGGTTGCATACTTGAATAGAAACTTGCATGTAGCTAATAGCAACACAACATCACTCTTATGTACCTTCAACATAGAAAAGCACAATTAGTTACATTTTTGGTAGCTCCAACACTTTGCAGTGTGTTTGTTTCGTGCAATCAGCATAATAATGGCTAAATTGGCGAAGCAAACAAAAATATTTCAATCAATTGTTCTTATCTTACCTGCATTTCCTGGTAGCATTTGTTTGGCAAGTGGCAACCCTCACATGTAGACCTTATGATTTCCTTAGTTCTGCAGGAAGGATATGATCC]
[+] EMBL AK110954             [                                                                 CGGCGCGCCGCCGTTCTGACGCTCCACGGCCACATGAACTGCCGCCACCTCGCCCTCCGGCTCCGCCACCTCCGCCGCCTTCTCGCGGTCGCACCCCTTTCCTCGCTCGCGGCCGCGCACTCCGCTAACCGCTCCTCCCCACGGCTAAACCCCACTTCGGTGCCGCCACCGCCGCGGCAGCTGCATCTCCCGACCCTCCAGGCTCGACGGCTCTGCTCCACCACGCACGTCGTCCTCCCCACAAACCTCCAGGACGAGCGGTTCGCGGCTCTCTCGGATAGGATCTACGACGCCGTGATTGAGACCGCGGCGGGTTCCAGCGAGGGCACGGAGGCGGCCCTTGACGCGCTGGGCGCCGAGCTGACCACCCCGCTCGTCGCCGACGTGCTGCATCGCCTCCGTTACGACGAGAAGCTGGCCTTCCGGTTCTTCGTCTGGGCGTCTCACCAGGACGGCTACGAGCACGAGGCCGCGACGTACAACGACGTCATCGACATCCTCTCCGGCACGCGGTACAAGGCCCGCCAGTTCGGCGTCCTCTGCGACGTGCTCGACCACATGAAGCGCCGCCGCACAAGGTCCGTGCCGGTCGACGACTTGCTGGGTATCCTGCGCGCATACACGGAGAAGCACCTCACGCATCTCAGGAAGCTGGCTAAGAAGCGGCGGGTGCGGATGCGCACGCCGCCGGAGACCGACGCTCTGAACGTGCTGCTGGACGCCTTCTGCAAGTGCGGGATGGTCCGGGAGGCGGAGGTGGTGTTCAGCCGCGTGAAGAGGAAGCTGCTGGGGAATGCCGAGACATACAGTATCCTGTTCTTCGGGTGGTGCCGGGCAAGGGACCCCAAGAGGGCCATGAAGGTGCTCGAGGAAATGATTCAGATGAAGCACACCCCTGAGAACTTCACTTACAATGCTGCCATTGACTCATTTTGCAGTGCTGGTTTGGTCTCAGAGGCAAGGGATTTGTTTGAGTTCATGAGAACAGAGGGGTCTACAATTTCATCGCCCACGGCTAAGACATACTCGATTATGATTGCGGCGCTAGCAAAGGCTGGTCAGATGGAGGAGTGCTTTGAACTGATTTCAGAAATGAGAAAGTGCGGCTGTATGCCTGATGTGTCGACATATAAAGACTTGATTGAAGGCATGTTGTTGGTGGATAAACTGGATGCTGCTTATTGTGTTTTAGATGAGATGGCAAAGGCTGGCTTTCCCCCTGACATTGTCACTTACAATTGCTTTCTGAAGGTGCTTTGTGGTCTTCAAAAGGCTGATGACGCGCTTGAACTCTGTGAAAGGATGATAGAGGCGCATTGTGAGCCTAGTGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_2627#0 GTTGGCCACGCGATTTCTCAGGCGCACCTCCGCCGCAACGCGAGTCCCCCCACCGCCGCC GGCCGCGGCGCGCCGCCGTTCTGACGCTCCACGGCCACATGAACTGCCGCCACCTCGCCC TCCGGCTCCGCCACCTCCGCCGCCTTCTCGCGGTCGCACCCCTTTCCTCGCTCGCGGCCG CGCACTCCGCTAACCGCTCCTCCCCACGGCTAAACCCCACTTCGGTGCCGCCACCGCCGC GGCAGCTGCATCTCCCGACCCTCCAGGCTCGACGGCTCTGCTCCACCACGCACGTCGTCC TCCCCACAAACCTCCAGGACGAGCGGTTCGCGGCTCTCTCGGATAGGATCTACGACGCCG TGATTGAGACCGCGGCGGGTTCCAGCGAGGGCACGGAGGCGGCCCTTGACGCGCTGGGCG CCGAGCTGACCACCCCGCTCGTCGCCGACGTGCTGCATCGCCTCCGTTACGACGAGAAGC TGGCCTTCCGGTTCTTCGTCTGGGCGTCTCACCAGGACGGCTACGAGCACGAGGCCGCGA CGTACAACGACGTCATCGACATCCTCTCCGGCACGCGGTACAAGGCCCGCCAGTTCGGCG TCCTCTGCGACGTGCTCGACCACATGAAGCGCCGCCGCACAAGGTCCGTGCCGGTCGACG ACTTGCTGGGTATCCTGCGCGCATACACGGAGAAGCACCTCACGCATCTCAGGAAGCTGG CTAAGAAGCGGCGGGTGCGGATGCGCACGCCGCCGGAGACCGACGCTCTGAACGTGCTGC TGGACGCCTTCTGCAAGTGCGGGATGGTCCGGGAGGCGGAGGTGGTGTTCAGCCGCGTGA AGAGGAAGCTGCTGGGGAATGCCGAGACATACAGTATCCTGTTCTTCGGGTGGTGCCGGG CAAGGGACCCCAAGAGGGCCATGAAGGTGCTCGAGGAAATGATTCAGATGAAGCACACCC CTGAGAACTTCACTTACAATGCTGCCATTGACTCATTTTGCAGTGCTGGTTTGGTCTCAG AGGCAAGGGATTTGTTTGAGTTCATGAGAACAGAGGGGTCTACAATTTCATCGCCCACGG CTAAGACATACTCGATTATGATTGCGGCGCTAGCAAAGGCTGGTCAGATGGAGGAGTGCT TTGAACTGATTTCAGAAATGAGAAAGTGCGGCTGTATGCCTGATGTGTCGACATATAAAG ACTTGATTGAAGGCATGTTGTTGGTGGATAAACTGGATGCTGCTTATTGTGTTTTAGATG AGATGGCAAAGGCTGGCTTTCCCCCTGACATTGTCACTTACAATTGCTTTCTGAAGGTGC TTTGTGGTCTTCAAAAGGCTGATGACGCGCTTGAACTCTGTGAAAGGATGATAGAGGCGC ATTGTGAGCCTAGTGTTCATACATATAATATGCTAATGGTGATGTTCTTTGAGATGAGAG AGCCAGATAGGGCAATCAATATTTGGATCGAGATGGACAAGAGAGGATGCCATCGCGCTG TTGATACCTACGAAACAATGATTGATGGGCTGTTTGATTCTGGAAGAACGGAAGATGCGA CCGCTCTTCTAGATGAGGTAATAAACCGTGGCATGAAACTTTCGTACAAGAAGTTTGATG CTATCATGTTGCGGCTATCAGCTGTAGGCAACCTTGGCGCGATACATCGGTTGTCAGAGC ATATGAGGAGATTTTACAATGTTGCAATGTCTAGGCGTTTTGCAATCACACAGAAGAAGA AGAGCATAGGTCTGAGAAGGAAATGAATATTTCGAGATTTCTTGTTAGTGCAGATGATCA GGAGTTTATATGAGGTTAGCTAATTATTGGTTTATTATTGCAGCAATTGGTTGTCACTTG CAAATGTATTAAAATATTTCCTGGGTCCTATATAGGTTCAGTGTTATTTTACCAATTTGT CTAGGAGTAAGTTGCATCTGTGAAATGCTTTGACTGCTGGTTGCATACTTGAATAGAAAC TTGCATGTAGCTAATAGCAACACAACATCACTCTTATGTACCTTCAACATAGAAAAGCAC AATTAGTTACATTTTTGGTAGCTCCAACACTTTGCAGTGTGTTTGTTTCGTGCAATCAGC ATAATAATGGCTAAATTGGCGAAGCAAACAAAAATATTTCAATCAATTGTTCTTATCTTA CCTGCATTTCCTGGTAGCATTTGTTTGGCAAGTGGCAACCCTCACATGTAGACCTTATGA TTTCCTTAGTTCTGCAGGAAGGATATGATCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)