Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2632 cluster # 2632       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2632#0 length = 1163 sequences # 2  
consensusID : consensus_2632#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1163
fasta sequence 
                              [TTATATATGTACTGCATCTTTCCACTTTTATTTCCTGTATTTGTTTAAATCTTCATATTATGCATTGATCGTTAATGGATTCTTCTTACTGTATGTTATCGATATATACCAAGAAAAGATCGTGTGCACCAATGAAATTTGTCATCTATTGGAATAAACTATCCACATTTATTATATATTCAATATAAGAGCATCACCAACAGTTCCCAAAATTCTATCCCTGAAATCTTTTGTTTAAATCACTAATGAGAAAATTTTGGGATAGAATCTAGGGCTAACTTTTCACCACCAAACCTAAAATTTTGAAACCATATTGAACATCTATTACTGATAGAAAATCGTAATAATCCAGGTACCAATACTTATAGCTGTATGCTCAACATGAATTTGTTAAACCATGCCTAAACGATAACACACGTGCTTTTTCATCCTCACTTTATGTAAAATGTTTAGTAAGTGTTGCTAGAACTTGGACAACTAGATACGTAAACTTGTGTAACCCTCCCAAAATTAGCATGGTAGGACTAAACTTCTCATTTCATACTGTACACACGTAGACTTCTATGCACTACCAGACTTGTGCTAACCCTACGGATCAAAAATTGTCAGAAAAATAGGGTTTATCCGTAGAAATTGTATTTTTGAGGGAACCGACAAGAATTGCCGATAGAAAAATCACAACGGAGAAATTATATTTTCCTATGGGTTTCCCTATGTGTTTAACACAGAAAACTTCCATTGGCATCGGGTTTTGTCGCCTAAATTGTGACGTGCTGCCGTCAGGAAAAAAGATCATGTGGCACCATAAAATAAAATGGCTCCAAGACAACCTCCCGCCCCCCCCCCCCCCCAACAATTCAATCCACATATCCATATGGATTATTGAACATAACTTTTTCAACAAAATATGCAAATGAACTCTTTTTTTTTTACTGATACATAAGTGATAAAGCTACAGATAGGCATGCACAACAATTCAGCATCAAATTTTAAGCAAACTTCAATCCTGTAAGTTATATAACCAATACACGTACATGCCAATTCACATCAACAAGAATCTTTTATTCACCACTATAAGTTACAAGTTATGGTACTACATGTCCTCCGGCAGCAATATTCCAAGCTAGATGAGACAATGAATGCAGATATCTTATCCCTTTTCG]

[+] EMBL AK068264             [TTATATATGTACTGCATCTTTCCACTTTTATTTCCTGTATTTGTTTAAATCTTCATATTATGCATTGATCGTTAATGGATTCTTCTTACTGTATGTTATCGATATATACCAAGAAAAGATCGTGTGCACCAATGAAATTTGTCATCTATTGGAATAAACTATCCACATTTATTATATATTCAATATAAGAGCATCACCAACAGTTCCCAAAATTCTATCCCTGAAATCTTTTGTTTAAATCACTAATGAGAAAATTTTGGGATAGAATCTAGGGCTAACTTTTCACCACCAAACCTAAAATTTTGAAACCATATTGAACATCTATTACTGATAGAAAATCGTAATAATCCAGGTACCAATACTTATAGCTGTATGCTCAACATGAATTTGTTAAACCATGCCTAAACGATAACACACGTGCTTTTTCATCCTCACTTTATGTAAAATGTTTAGTAAGTGTTGCTAGAACTTGGACAACTAGATACGTAAACTTGTGTAACCCTCCCAAAATTAGCATGGTAGGACTAAACTTCTCATTTCATACTGTACACACGTAGACTTCTATGCACTACCAGACTTGTGCTAACCCTACGGATCAAAAATTGTCAGAAAAATAGGGTTTATCCGTAGAAATTGTATTTTTGAGGGAACCGACAAGAATTGCCGATAGAAAAATCACAACGGAGAAATTATATTTTCCTATGGGTTTCCCTATGTGTTTAACACAGAAAACTTCCATTGGCATCGGGTTTTGTCGCCTAAATTGTGACGTGCTGCCGTCAGGAAAAAAGATCATGTGGCACCATAAAATAAAATGGCTCCAAGACAACCTCCCGCCCCCCCCCCCCCCCAACAATTCAATCCACATATCCATATGGATTATTGAACATAACTTTTTCAACAAAATATGCAAATGAACTCTTTTTTTTTTACTGATACATAAGTGATAAAGCTACAGATAGGCATGCACAACAATTCAGCATCAAATTTTAAGCAAACTTCAATCCTGTAAGTTATATAACCAATACACGTACATGCCAATTCACATCAACAAGAATCTTTTATTCACCACTATAAGTTACAAGTTATGGTACTACATGTCCTCCGGCAGCAATATTCCAAGCTAGATGAGACAATGAATGCAGATATCTTATCCCTTTTCG]
[+] EMBL CB678284             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAAATGTTTAGTAAGTGTTGCTAGAACTTGGACAACTAGATACGTAAACTTGTGTAACCCTCCCAAAATTAGCATGGTAGGACTAAACTTCTCATTTCATACTGTACACACGTAGACTTCTATGCACTACCAGACTTGTGCTAACCCTACGGATCAAAAATTGTCAGAAAAATAGGGTTTATCCGTAGAAATTGTATTTTTGAGGGAACCGACAAGAATTGCCGATAGAAAAATCACAACGGAGAAATTATATTTTCCTATGGGTTTCCCTATGTGTTTAACACAGAAAACTTCCATTGGCATCGGGTTTTGTCGCCTAAATTGTGACGTGCTGCCGTCAGGAAAAAAGATCATGTGGCACCATAAAATAAAATGGCTCCAAGACAACCTCCCGCCCCCCCCCCCCCCCAACAATTCAATCCACATATCCATATGGATTATTGAACATAACTTTTTCAACAAAATATGCAAATGAACTCTTTTTTTTTTACTGATACATAAGTGATAAAGCTACAGATAGGCATGCACAACAATTCAGCATCAAATTTTAAGCAAACTTCAATCCTGTAAGTTATATAACCAATACACGTACATGCCAATTCACATCAACAAGAATCTTTTATTCACCACTATAAGTTACAAGTTATGGTACTACATGTCCTCCGGCAGCAATATTCCAAGCTAGATGAGACAATGAATGCAGATATCTTATCCCTTTTCG]




>consensus_2632#0
TTATATATGTACTGCATCTTTCCACTTTTATTTCCTGTATTTGTTTAAATCTTCATATTA
TGCATTGATCGTTAATGGATTCTTCTTACTGTATGTTATCGATATATACCAAGAAAAGAT
CGTGTGCACCAATGAAATTTGTCATCTATTGGAATAAACTATCCACATTTATTATATATT
CAATATAAGAGCATCACCAACAGTTCCCAAAATTCTATCCCTGAAATCTTTTGTTTAAAT
CACTAATGAGAAAATTTTGGGATAGAATCTAGGGCTAACTTTTCACCACCAAACCTAAAA
TTTTGAAACCATATTGAACATCTATTACTGATAGAAAATCGTAATAATCCAGGTACCAAT
ACTTATAGCTGTATGCTCAACATGAATTTGTTAAACCATGCCTAAACGATAACACACGTG
CTTTTTCATCCTCACTTTATGTAAAATGTTTAGTAAGTGTTGCTAGAACTTGGACAACTA
GATACGTAAACTTGTGTAACCCTCCCAAAATTAGCATGGTAGGACTAAACTTCTCATTTC
ATACTGTACACACGTAGACTTCTATGCACTACCAGACTTGTGCTAACCCTACGGATCAAA
AATTGTCAGAAAAATAGGGTTTATCCGTAGAAATTGTATTTTTGAGGGAACCGACAAGAA
TTGCCGATAGAAAAATCACAACGGAGAAATTATATTTTCCTATGGGTTTCCCTATGTGTT
TAACACAGAAAACTTCCATTGGCATCGGGTTTTGTCGCCTAAATTGTGACGTGCTGCCGT
CAGGAAAAAAGATCATGTGGCACCATAAAATAAAATGGCTCCAAGACAACCTCCCGCCCC
CCCCCCCCCCCAACAATTCAATCCACATATCCATATGGATTATTGAACATAACTTTTTCA
ACAAAATATGCAAATGAACTCTTTTTTTTTTACTGATACATAAGTGATAAAGCTACAGAT
AGGCATGCACAACAATTCAGCATCAAATTTTAAGCAAACTTCAATCCTGTAAGTTATATA
ACCAATACACGTACATGCCAATTCACATCAACAAGAATCTTTTATTCACCACTATAAGTT
ACAAGTTATGGTACTACATGTCCTCCGGCAGCAATATTCCAAGCTAGATGAGACAATGAA
TGCAGATATCTTATCCCTTTTCG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)